EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000006588 (Gene tree)
Gene ID: 108248677
Gene Symbol: prpf38a
Alias: fa04h11|fc83e08|wu:fa04h11|wu:fc83e08|zgc:92059
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 3868 bases
Position: chrLWHD01000363.1:51048-54915
Accession: 108248677
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000008758	PRP38	PF03371.15	1.3e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000008892	-	1412	XM_017437607	ENSKMAP00000008758	309 (aa)	XP_017293096	UPI0007F91901

Gene Model

Click here to download ENSKMAG00000006588's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000006588's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000006588	prpf38a	100	82.109	ENSG00000134748	PRPF38A	71	90.045	Homo_sapiens
ENSKMAG00000006588	prpf38a	100	95.793	ENSAPOG00000011652	prpf38a	72	95.475	Acanthochromis_polyacanthus
ENSKMAG00000006588	prpf38a	100	82.109	ENSAMEG00000009319	PRPF38A	71	90.045	Ailuropoda_melanoleuca
ENSKMAG00000006588	prpf38a	72	92.793	ENSACIG00000012292	prpf38a	73	92.793	Amphilophus_citrinellus
ENSKMAG00000006588	prpf38a	100	95.793	ENSAOCG00000018004	prpf38a	72	95.475	Amphiprion_ocellaris
ENSKMAG00000006588	prpf38a	100	95.793	ENSAPEG00000021414	prpf38a	72	95.475	Amphiprion_percula
ENSKMAG00000006588	prpf38a	72	95.023	ENSATEG00000004608	prpf38a	72	95.023	Anabas_testudineus
ENSKMAG00000006588	prpf38a	79	78.226	ENSAPLG00000005827	PRPF38A	63	87.179	Anas_platyrhynchos
ENSKMAG00000006588	prpf38a	100	80.831	ENSACAG00000008249	PRPF38A	71	88.235	Anolis_carolinensis
ENSKMAG00000006588	prpf38a	100	82.109	ENSANAG00000027839	PRPF38A	71	90.045	Aotus_nancymaae
ENSKMAG00000006588	prpf38a	100	60.635	ENSANAG00000029204	-	70	57.778	Aotus_nancymaae
ENSKMAG00000006588	prpf38a	72	94.118	ENSACLG00000021595	prpf38a	74	94.118	Astatotilapia_calliptera
ENSKMAG00000006588	prpf38a	100	84.665	ENSAMXG00000029274	prpf38a	71	94.570	Astyanax_mexicanus
ENSKMAG00000006588	prpf38a	100	82.109	ENSBTAG00000002720	PRPF38A	75	90.045	Bos_taurus
ENSKMAG00000006588	prpf38a	63	64.103	WBGene00008380	prp-38	67	62.037	Caenorhabditis_elegans
ENSKMAG00000006588	prpf38a	100	82.109	ENSCJAG00000021594	PRPF38A	74	90.045	Callithrix_jacchus
ENSKMAG00000006588	prpf38a	100	82.109	ENSCAFG00000003740	PRPF38A	71	90.045	Canis_familiaris
ENSKMAG00000006588	prpf38a	100	82.109	ENSCAFG00020010939	PRPF38A	71	90.045	Canis_lupus_dingo
ENSKMAG00000006588	prpf38a	100	82.109	ENSCHIG00000024730	PRPF38A	71	90.045	Capra_hircus
ENSKMAG00000006588	prpf38a	100	82.109	ENSTSYG00000009868	-	71	90.045	Carlito_syrichta
ENSKMAG00000006588	prpf38a	61	86.170	ENSTSYG00000031994	-	63	87.079	Carlito_syrichta
ENSKMAG00000006588	prpf38a	100	83.601	ENSCPOG00000005079	PRPF38A	71	90.045	Cavia_porcellus
ENSKMAG00000006588	prpf38a	75	89.177	ENSCCAG00000026502	PRPF38A	71	90.045	Cebus_capucinus
ENSKMAG00000006588	prpf38a	93	53.979	ENSCATG00000044190	-	57	55.851	Cercocebus_atys
ENSKMAG00000006588	prpf38a	100	82.109	ENSCATG00000032296	PRPF38A	71	90.045	Cercocebus_atys
ENSKMAG00000006588	prpf38a	100	82.109	ENSCLAG00000005816	PRPF38A	71	90.045	Chinchilla_lanigera
ENSKMAG00000006588	prpf38a	100	81.150	ENSCPBG00000014791	PRPF38A	71	88.688	Chrysemys_picta_bellii
ENSKMAG00000006588	prpf38a	75	69.264	ENSCSAVG00000009580	-	62	76.064	Ciona_savignyi
ENSKMAG00000006588	prpf38a	75	89.177	ENSCANG00000032608	PRPF38A	74	90.045	Colobus_angolensis_palliatus
ENSKMAG00000006588	prpf38a	84	72.797	ENSCGRG00001002557	-	74	76.471	Cricetulus_griseus_chok1gshd
ENSKMAG00000006588	prpf38a	100	82.109	ENSCGRG00001018502	-	71	90.045	Cricetulus_griseus_chok1gshd
ENSKMAG00000006588	prpf38a	100	82.109	ENSCGRG00000014868	Prpf38a	71	90.045	Cricetulus_griseus_crigri
ENSKMAG00000006588	prpf38a	72	93.213	ENSCSEG00000001269	prpf38a	76	93.213	Cynoglossus_semilaevis
ENSKMAG00000006588	prpf38a	100	98.058	ENSCVAG00000012305	prpf38a	100	98.058	Cyprinodon_variegatus
ENSKMAG00000006588	prpf38a	100	83.706	ENSDARG00000039213	prpf38a	71	93.665	Danio_rerio
ENSKMAG00000006588	prpf38a	100	82.109	ENSDNOG00000042326	PRPF38A	72	90.045	Dasypus_novemcinctus
ENSKMAG00000006588	prpf38a	85	96.875	ENSDORG00000023857	-	64	96.875	Dipodomys_ordii
ENSKMAG00000006588	prpf38a	84	75.665	ENSDORG00000025371	-	75	82.569	Dipodomys_ordii
ENSKMAG00000006588	prpf38a	84	75.665	ENSDORG00000023691	-	75	82.569	Dipodomys_ordii
ENSKMAG00000006588	prpf38a	65	72.637	FBgn0050342	Prp38	57	75.000	Drosophila_melanogaster
ENSKMAG00000006588	prpf38a	77	82.008	ENSEBUG00000012588	prpf38a	71	82.063	Eptatretus_burgeri
ENSKMAG00000006588	prpf38a	100	82.109	ENSEASG00005014427	PRPF38A	71	90.045	Equus_asinus_asinus
ENSKMAG00000006588	prpf38a	100	82.109	ENSECAG00000022628	PRPF38A	71	90.045	Equus_caballus
ENSKMAG00000006588	prpf38a	72	94.118	ENSELUG00000021094	prpf38a	75	94.118	Esox_lucius
ENSKMAG00000006588	prpf38a	100	82.109	ENSFCAG00000002518	PRPF38A	71	90.045	Felis_catus
ENSKMAG00000006588	prpf38a	99	76.623	ENSFALG00000003612	-	73	84.404	Ficedula_albicollis
ENSKMAG00000006588	prpf38a	87	79.044	ENSFALG00000005598	-	66	87.222	Ficedula_albicollis
ENSKMAG00000006588	prpf38a	100	83.280	ENSFDAG00000011287	PRPF38A	72	90.045	Fukomys_damarensis
ENSKMAG00000006588	prpf38a	95	96.949	ENSFHEG00000014317	prpf38a	100	96.949	Fundulus_heteroclitus
ENSKMAG00000006588	prpf38a	54	96.988	ENSGMOG00000011384	prpf38a	54	96.988	Gadus_morhua
ENSKMAG00000006588	prpf38a	100	81.789	ENSGALG00000010627	PRPF38A	71	89.593	Gallus_gallus
ENSKMAG00000006588	prpf38a	100	97.087	ENSGAFG00000012422	prpf38a	100	97.087	Gambusia_affinis
ENSKMAG00000006588	prpf38a	54	92.941	ENSGACG00000000182	-	100	92.941	Gasterosteus_aculeatus
ENSKMAG00000006588	prpf38a	72	92.825	ENSGACG00000005423	prpf38a	72	92.825	Gasterosteus_aculeatus
ENSKMAG00000006588	prpf38a	100	81.150	ENSGAGG00000020547	PRPF38A	71	88.688	Gopherus_agassizii
ENSKMAG00000006588	prpf38a	100	82.109	ENSGGOG00000003940	PRPF38A	71	90.045	Gorilla_gorilla
ENSKMAG00000006588	prpf38a	61	95.767	ENSHBUG00000020572	prpf38a	80	95.745	Haplochromis_burtoni
ENSKMAG00000006588	prpf38a	100	74.598	ENSHGLG00000007918	-	71	78.281	Heterocephalus_glaber_female
ENSKMAG00000006588	prpf38a	100	82.109	ENSHGLG00000000475	PRPF38A	71	90.045	Heterocephalus_glaber_female
ENSKMAG00000006588	prpf38a	100	74.598	ENSHGLG00100003928	-	71	78.281	Heterocephalus_glaber_male
ENSKMAG00000006588	prpf38a	100	82.109	ENSHGLG00100008935	PRPF38A	71	90.045	Heterocephalus_glaber_male
ENSKMAG00000006588	prpf38a	59	93.956	ENSHCOG00000020781	prpf38a	59	94.149	Hippocampus_comes
ENSKMAG00000006588	prpf38a	90	83.513	ENSIPUG00000005757	prpf38a	71	92.342	Ictalurus_punctatus
ENSKMAG00000006588	prpf38a	100	82.109	ENSSTOG00000015610	PRPF38A	71	90.045	Ictidomys_tridecemlineatus
ENSKMAG00000006588	prpf38a	100	81.470	ENSJJAG00000015811	Prpf38a	71	89.140	Jaculus_jaculus
ENSKMAG00000006588	prpf38a	100	94.175	ENSLBEG00000020585	prpf38a	72	94.118	Labrus_bergylta
ENSKMAG00000006588	prpf38a	100	82.109	ENSLACG00000011495	PRPF38A	71	89.140	Latimeria_chalumnae
ENSKMAG00000006588	prpf38a	100	91.613	ENSLOCG00000006262	prpf38a	72	90.090	Lepisosteus_oculatus
ENSKMAG00000006588	prpf38a	100	82.109	ENSLAFG00000025862	PRPF38A	71	90.045	Loxodonta_africana
ENSKMAG00000006588	prpf38a	100	82.109	ENSMFAG00000039449	PRPF38A	74	90.045	Macaca_fascicularis
ENSKMAG00000006588	prpf38a	87	79.412	ENSMMUG00000014333	PRPF38A	65	87.293	Macaca_mulatta
ENSKMAG00000006588	prpf38a	93	53.287	ENSMNEG00000040242	-	65	57.971	Macaca_nemestrina
ENSKMAG00000006588	prpf38a	100	82.109	ENSMNEG00000031221	PRPF38A	71	90.045	Macaca_nemestrina
ENSKMAG00000006588	prpf38a	100	82.109	ENSMLEG00000041105	PRPF38A	71	90.045	Mandrillus_leucophaeus
ENSKMAG00000006588	prpf38a	100	96.440	ENSMAMG00000015431	prpf38a	100	96.440	Mastacembelus_armatus
ENSKMAG00000006588	prpf38a	72	94.118	ENSMZEG00005017838	prpf38a	72	94.118	Maylandia_zebra
ENSKMAG00000006588	prpf38a	75	88.745	ENSMGAG00000011176	PRPF38A	74	89.593	Meleagris_gallopavo
ENSKMAG00000006588	prpf38a	85	84.091	ENSMAUG00000018029	-	84	85.520	Mesocricetus_auratus
ENSKMAG00000006588	prpf38a	100	82.109	ENSMICG00000014193	PRPF38A	71	90.045	Microcebus_murinus
ENSKMAG00000006588	prpf38a	100	82.109	ENSMOCG00000013080	Prpf38a	71	90.045	Microtus_ochrogaster
ENSKMAG00000006588	prpf38a	84	90.038	ENSMMOG00000016972	prpf38a	78	95.475	Mola_mola
ENSKMAG00000006588	prpf38a	100	79.936	ENSMODG00000000644	PRPF38A	71	86.937	Monodelphis_domestica
ENSKMAG00000006588	prpf38a	100	96.117	ENSMALG00000019363	prpf38a	97	96.117	Monopterus_albus
ENSKMAG00000006588	prpf38a	100	81.789	MGP_CAROLIEiJ_G0026269	Prpf38a	71	89.593	Mus_caroli
ENSKMAG00000006588	prpf38a	100	81.789	ENSMUSG00000063800	Prpf38a	71	89.593	Mus_musculus
ENSKMAG00000006588	prpf38a	100	81.789	MGP_PahariEiJ_G0028602	Prpf38a	71	89.593	Mus_pahari
ENSKMAG00000006588	prpf38a	100	81.470	MGP_SPRETEiJ_G0027238	Prpf38a	93	92.553	Mus_spretus
ENSKMAG00000006588	prpf38a	100	82.109	ENSMPUG00000006896	PRPF38A	71	90.045	Mustela_putorius_furo
ENSKMAG00000006588	prpf38a	100	83.923	ENSNGAG00000011884	Prpf38a	72	90.045	Nannospalax_galili
ENSKMAG00000006588	prpf38a	72	92.793	ENSNBRG00000004013	prpf38a	71	92.793	Neolamprologus_brichardi
ENSKMAG00000006588	prpf38a	93	81.034	ENSNLEG00000017999	PRPF38A	63	89.394	Nomascus_leucogenys
ENSKMAG00000006588	prpf38a	97	63.816	ENSNLEG00000012592	-	67	59.729	Nomascus_leucogenys
ENSKMAG00000006588	prpf38a	93	57.388	ENSNLEG00000033398	-	60	52.968	Nomascus_leucogenys
ENSKMAG00000006588	prpf38a	100	78.594	ENSMEUG00000003860	PRPF38A	71	85.068	Notamacropus_eugenii
ENSKMAG00000006588	prpf38a	74	89.474	ENSOPRG00000008985	PRPF38A	92	90.045	Ochotona_princeps
ENSKMAG00000006588	prpf38a	100	82.109	ENSODEG00000005869	PRPF38A	71	90.045	Octodon_degus
ENSKMAG00000006588	prpf38a	72	93.665	ENSONIG00000007816	prpf38a	72	93.665	Oreochromis_niloticus
ENSKMAG00000006588	prpf38a	75	45.923	ENSOANG00000009541	-	71	44.643	Ornithorhynchus_anatinus
ENSKMAG00000006588	prpf38a	100	82.109	ENSOCUG00000000963	PRPF38A	71	90.045	Oryctolagus_cuniculus
ENSKMAG00000006588	prpf38a	100	96.440	ENSORLG00000013485	prpf38a	100	96.440	Oryzias_latipes
ENSKMAG00000006588	prpf38a	100	96.440	ENSORLG00020002130	prpf38a	100	96.440	Oryzias_latipes_hni
ENSKMAG00000006588	prpf38a	100	96.117	ENSORLG00015021393	prpf38a	100	96.610	Oryzias_latipes_hsok
ENSKMAG00000006588	prpf38a	100	96.117	ENSOMEG00000016333	prpf38a	100	96.117	Oryzias_melastigma
ENSKMAG00000006588	prpf38a	100	82.109	ENSOGAG00000005423	PRPF38A	71	90.045	Otolemur_garnettii
ENSKMAG00000006588	prpf38a	100	82.109	ENSOARG00000005373	PRPF38A	71	90.045	Ovis_aries
ENSKMAG00000006588	prpf38a	100	82.109	ENSPPAG00000030905	PRPF38A	71	90.045	Pan_paniscus
ENSKMAG00000006588	prpf38a	93	69.759	ENSPPAG00000033867	-	68	71.041	Pan_paniscus
ENSKMAG00000006588	prpf38a	100	82.109	ENSPPRG00000013268	PRPF38A	71	90.045	Panthera_pardus
ENSKMAG00000006588	prpf38a	100	82.109	ENSPTIG00000015419	PRPF38A	71	90.045	Panthera_tigris_altaica
ENSKMAG00000006588	prpf38a	100	82.109	ENSPTRG00000000739	PRPF38A	74	90.045	Pan_troglodytes
ENSKMAG00000006588	prpf38a	100	82.109	ENSPANG00000015483	PRPF38A	71	90.045	Papio_anubis
ENSKMAG00000006588	prpf38a	100	93.528	ENSPKIG00000011439	prpf38a	72	93.213	Paramormyrops_kingsleyae
ENSKMAG00000006588	prpf38a	100	80.831	ENSPSIG00000017487	PRPF38A	71	88.235	Pelodiscus_sinensis
ENSKMAG00000006588	prpf38a	99	74.183	ENSPMGG00000021352	prpf38a	78	92.920	Periophthalmus_magnuspinnatus
ENSKMAG00000006588	prpf38a	100	80.317	ENSPEMG00000011212	-	70	82.511	Peromyscus_maniculatus_bairdii
ENSKMAG00000006588	prpf38a	100	82.109	ENSPEMG00000023277	-	71	90.045	Peromyscus_maniculatus_bairdii
ENSKMAG00000006588	prpf38a	100	79.618	ENSPCIG00000022369	-	71	86.486	Phascolarctos_cinereus
ENSKMAG00000006588	prpf38a	100	97.087	ENSPFOG00000004248	prpf38a	100	97.087	Poecilia_formosa
ENSKMAG00000006588	prpf38a	100	97.087	ENSPLAG00000010328	prpf38a	100	97.087	Poecilia_latipinna
ENSKMAG00000006588	prpf38a	100	97.087	ENSPMEG00000011804	prpf38a	100	97.087	Poecilia_mexicana
ENSKMAG00000006588	prpf38a	94	80.872	ENSPREG00000002835	prpf38a	58	97.872	Poecilia_reticulata
ENSKMAG00000006588	prpf38a	100	74.214	ENSPPYG00000001348	PRPF38A	71	78.761	Pongo_abelii
ENSKMAG00000006588	prpf38a	100	81.789	ENSPCAG00000013328	PRPF38A	71	89.593	Procavia_capensis
ENSKMAG00000006588	prpf38a	100	66.990	ENSPCOG00000020709	-	73	75.113	Propithecus_coquereli
ENSKMAG00000006588	prpf38a	100	82.109	ENSPCOG00000016387	-	71	90.045	Propithecus_coquereli
ENSKMAG00000006588	prpf38a	100	82.109	ENSPVAG00000009803	PRPF38A	71	90.045	Pteropus_vampyrus
ENSKMAG00000006588	prpf38a	72	94.118	ENSPNYG00000005571	prpf38a	72	94.118	Pundamilia_nyererei
ENSKMAG00000006588	prpf38a	100	84.026	ENSPNAG00000010399	prpf38a	71	93.665	Pygocentrus_nattereri
ENSKMAG00000006588	prpf38a	100	82.428	ENSRNOG00000009451	Prpf38a	71	90.498	Rattus_norvegicus
ENSKMAG00000006588	prpf38a	100	82.109	ENSRBIG00000036442	PRPF38A	74	90.045	Rhinopithecus_bieti
ENSKMAG00000006588	prpf38a	98	71.148	ENSRROG00000040003	-	72	73.303	Rhinopithecus_roxellana
ENSKMAG00000006588	prpf38a	100	82.109	ENSRROG00000032788	PRPF38A	71	90.045	Rhinopithecus_roxellana
ENSKMAG00000006588	prpf38a	100	82.109	ENSSBOG00000019515	PRPF38A	71	90.045	Saimiri_boliviensis_boliviensis
ENSKMAG00000006588	prpf38a	96	67.224	ENSSHAG00000006029	-	74	77.828	Sarcophilus_harrisii
ENSKMAG00000006588	prpf38a	86	76.838	ENSSHAG00000006906	-	66	83.889	Sarcophilus_harrisii
ENSKMAG00000006588	prpf38a	100	91.935	ENSSFOG00015013572	prpf38a	72	88.288	Scleropages_formosus
ENSKMAG00000006588	prpf38a	72	95.475	ENSSMAG00000015379	prpf38a	72	95.475	Scophthalmus_maximus
ENSKMAG00000006588	prpf38a	100	97.087	ENSSDUG00000001324	prpf38a	100	97.087	Seriola_dumerili
ENSKMAG00000006588	prpf38a	100	97.087	ENSSLDG00000014803	prpf38a	100	97.087	Seriola_lalandi_dorsalis
ENSKMAG00000006588	prpf38a	100	65.495	ENSSARG00000014458	PRPF38A	71	66.516	Sorex_araneus
ENSKMAG00000006588	prpf38a	100	80.831	ENSSPUG00000013259	PRPF38A	71	88.235	Sphenodon_punctatus
ENSKMAG00000006588	prpf38a	83	71.875	ENSSPAG00000010449	prpf38a	68	76.577	Stegastes_partitus
ENSKMAG00000006588	prpf38a	100	82.109	ENSSSCG00000028288	PRPF38A	71	90.045	Sus_scrofa
ENSKMAG00000006588	prpf38a	100	77.955	ENSTGUG00000008995	PRPF38A	71	84.163	Taeniopygia_guttata
ENSKMAG00000006588	prpf38a	72	95.023	ENSTRUG00000003374	prpf38a	68	95.023	Takifugu_rubripes
ENSKMAG00000006588	prpf38a	100	93.891	ENSTNIG00000005533	prpf38a	100	93.891	Tetraodon_nigroviridis
ENSKMAG00000006588	prpf38a	100	81.470	ENSTBEG00000000725	PRPF38A	71	90.045	Tupaia_belangeri
ENSKMAG00000006588	prpf38a	100	82.109	ENSTTRG00000016139	PRPF38A	71	90.045	Tursiops_truncatus
ENSKMAG00000006588	prpf38a	100	82.109	ENSUAMG00000000625	PRPF38A	71	90.045	Ursus_americanus
ENSKMAG00000006588	prpf38a	100	82.109	ENSUMAG00000022674	PRPF38A	71	90.045	Ursus_maritimus
ENSKMAG00000006588	prpf38a	75	88.745	ENSVPAG00000000907	PRPF38A	71	89.593	Vicugna_pacos
ENSKMAG00000006588	prpf38a	100	82.109	ENSVVUG00000004475	PRPF38A	71	90.045	Vulpes_vulpes
ENSKMAG00000006588	prpf38a	100	80.892	ENSXETG00000008060	prpf38a	71	87.783	Xenopus_tropicalis
ENSKMAG00000006588	prpf38a	72	95.067	ENSXCOG00000007393	prpf38a	74	95.067	Xiphophorus_couchianus
ENSKMAG00000006588	prpf38a	100	97.087	ENSXMAG00000026143	prpf38a	100	97.087	Xiphophorus_maculatus