EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000006651 (Gene tree)
Gene ID: 108248665
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 3159 bases
Position: chrLWHD01000363.1:102177-105335
Accession: 108248665
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000008840	RTC	PF01137.21	3e-87	1	1
ENSKMAP00000008840	RTC_insert	PF05189.13	1.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000008974	-	1218	XM_017437588	ENSKMAP00000008840	366 (aa)	XP_017293077	UPI0007F872CD

Gene Model

Click here to download ENSKMAG00000006651's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000006651's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000006651	rtca	98	72.022	ENSG00000137996	RTCA	100	71.429	Homo_sapiens
ENSKMAG00000006651	rtca	100	90.164	ENSAPOG00000001345	rtca	100	90.164	Acanthochromis_polyacanthus
ENSKMAG00000006651	rtca	73	73.234	ENSAMEG00000008855	RTCA	100	73.234	Ailuropoda_melanoleuca
ENSKMAG00000006651	rtca	99	89.011	ENSACIG00000019643	rtca	100	89.011	Amphilophus_citrinellus
ENSKMAG00000006651	rtca	100	90.437	ENSAOCG00000014979	rtca	100	90.437	Amphiprion_ocellaris
ENSKMAG00000006651	rtca	100	90.437	ENSAPEG00000006945	rtca	100	90.437	Amphiprion_percula
ENSKMAG00000006651	rtca	95	90.544	ENSATEG00000006315	rtca	96	90.544	Anabas_testudineus
ENSKMAG00000006651	rtca	95	68.555	ENSAPLG00000015430	RTCA	100	68.555	Anas_platyrhynchos
ENSKMAG00000006651	rtca	99	71.585	ENSANAG00000025446	RTCA	100	71.585	Aotus_nancymaae
ENSKMAG00000006651	rtca	100	89.891	ENSACLG00000020770	rtca	100	89.891	Astatotilapia_calliptera
ENSKMAG00000006651	rtca	99	79.121	ENSAMXG00000043271	rtca	100	79.121	Astyanax_mexicanus
ENSKMAG00000006651	rtca	98	73.130	ENSBTAG00000006321	RTCA	99	73.130	Bos_taurus
ENSKMAG00000006651	rtca	98	72.022	ENSCJAG00000003398	RTCA	99	72.022	Callithrix_jacchus
ENSKMAG00000006651	rtca	98	72.022	ENSCAFG00000020010	RTCA	67	72.022	Canis_familiaris
ENSKMAG00000006651	rtca	98	72.022	ENSCAFG00020011528	RTCA	56	72.022	Canis_lupus_dingo
ENSKMAG00000006651	rtca	98	72.853	ENSCHIG00000018937	RTCA	99	72.853	Capra_hircus
ENSKMAG00000006651	rtca	98	71.468	ENSTSYG00000011305	RTCA	99	71.468	Carlito_syrichta
ENSKMAG00000006651	rtca	98	72.022	ENSCCAG00000021844	RTCA	98	73.171	Cebus_capucinus
ENSKMAG00000006651	rtca	98	69.786	ENSCATG00000019364	RTCA	100	71.521	Cercocebus_atys
ENSKMAG00000006651	rtca	86	72.468	ENSCLAG00000006125	RTCA	100	72.468	Chinchilla_lanigera
ENSKMAG00000006651	rtca	98	72.022	ENSCSAG00000001509	RTCA	99	72.022	Chlorocebus_sabaeus
ENSKMAG00000006651	rtca	99	71.038	ENSCHOG00000005211	RTCA	100	71.038	Choloepus_hoffmanni
ENSKMAG00000006651	rtca	99	68.493	ENSCPBG00000026658	RTCA	100	68.493	Chrysemys_picta_bellii
ENSKMAG00000006651	rtca	98	55.989	ENSCING00000007875	-	98	55.989	Ciona_intestinalis
ENSKMAG00000006651	rtca	98	54.875	ENSCSAVG00000007269	-	98	54.875	Ciona_savignyi
ENSKMAG00000006651	rtca	98	71.745	ENSCANG00000040106	RTCA	99	71.745	Colobus_angolensis_palliatus
ENSKMAG00000006651	rtca	73	73.606	ENSCGRG00001013163	Rtca	85	73.606	Cricetulus_griseus_chok1gshd
ENSKMAG00000006651	rtca	98	85.475	ENSCSEG00000000530	rtca	96	85.475	Cynoglossus_semilaevis
ENSKMAG00000006651	rtca	99	72.900	ENSCVAG00000021809	rtca	100	72.900	Cyprinodon_variegatus
ENSKMAG00000006651	rtca	99	78.846	ENSDARG00000002215	rtca	100	78.846	Danio_rerio
ENSKMAG00000006651	rtca	98	72.853	ENSDNOG00000000456	RTCA	99	72.853	Dasypus_novemcinctus
ENSKMAG00000006651	rtca	98	72.299	ENSDORG00000005448	Rtca	99	72.299	Dipodomys_ordii
ENSKMAG00000006651	rtca	97	39.776	FBgn0025630	Rtca	98	39.776	Drosophila_melanogaster
ENSKMAG00000006651	rtca	93	54.678	ENSEBUG00000008556	rtca	94	54.678	Eptatretus_burgeri
ENSKMAG00000006651	rtca	98	72.299	ENSEASG00005015926	RTCA	99	72.299	Equus_asinus_asinus
ENSKMAG00000006651	rtca	98	72.299	ENSECAG00000019831	RTCA	99	72.299	Equus_caballus
ENSKMAG00000006651	rtca	89	65.689	ENSEEUG00000001165	RTCA	99	65.689	Erinaceus_europaeus
ENSKMAG00000006651	rtca	99	77.624	ENSELUG00000003741	rtca	99	77.624	Esox_lucius
ENSKMAG00000006651	rtca	98	72.299	ENSFCAG00000024460	RTCA	99	72.299	Felis_catus
ENSKMAG00000006651	rtca	93	68.235	ENSFALG00000002443	RTCA	91	68.235	Ficedula_albicollis
ENSKMAG00000006651	rtca	96	57.423	ENSFDAG00000016084	-	98	57.423	Fukomys_damarensis
ENSKMAG00000006651	rtca	98	70.914	ENSFDAG00000012070	-	99	70.914	Fukomys_damarensis
ENSKMAG00000006651	rtca	58	90.521	ENSFHEG00000002868	rtca	92	86.977	Fundulus_heteroclitus
ENSKMAG00000006651	rtca	99	79.945	ENSGMOG00000013264	rtca	100	79.945	Gadus_morhua
ENSKMAG00000006651	rtca	99	68.493	ENSGALG00000005277	RTCA	100	68.493	Gallus_gallus
ENSKMAG00000006651	rtca	100	90.437	ENSGAFG00000011853	rtca	100	90.437	Gambusia_affinis
ENSKMAG00000006651	rtca	99	85.440	ENSGACG00000013497	rtca	100	85.440	Gasterosteus_aculeatus
ENSKMAG00000006651	rtca	80	68.942	ENSGAGG00000023306	RTCA	100	68.942	Gopherus_agassizii
ENSKMAG00000006651	rtca	98	71.745	ENSGGOG00000009546	-	100	70.874	Gorilla_gorilla
ENSKMAG00000006651	rtca	98	70.914	ENSGGOG00000044018	-	99	70.914	Gorilla_gorilla
ENSKMAG00000006651	rtca	100	89.891	ENSHBUG00000002114	rtca	100	89.891	Haplochromis_burtoni
ENSKMAG00000006651	rtca	98	71.191	ENSHGLG00000002617	RTCA	99	71.191	Heterocephalus_glaber_female
ENSKMAG00000006651	rtca	98	71.191	ENSHGLG00100006056	RTCA	99	71.191	Heterocephalus_glaber_male
ENSKMAG00000006651	rtca	99	75.616	ENSHCOG00000020628	rtca	90	75.616	Hippocampus_comes
ENSKMAG00000006651	rtca	99	78.571	ENSIPUG00000024803	rtca	100	78.571	Ictalurus_punctatus
ENSKMAG00000006651	rtca	98	66.759	ENSSTOG00000013528	-	99	66.759	Ictidomys_tridecemlineatus
ENSKMAG00000006651	rtca	99	62.295	ENSSTOG00000033099	-	100	62.295	Ictidomys_tridecemlineatus
ENSKMAG00000006651	rtca	98	52.778	ENSJJAG00000016178	Rtca	98	52.778	Jaculus_jaculus
ENSKMAG00000006651	rtca	98	87.500	ENSLBEG00000028971	rtca	99	87.500	Labrus_bergylta
ENSKMAG00000006651	rtca	87	86.834	ENSLBEG00000002448	-	99	86.834	Labrus_bergylta
ENSKMAG00000006651	rtca	99	67.397	ENSLACG00000013666	RTCA	100	67.397	Latimeria_chalumnae
ENSKMAG00000006651	rtca	99	73.425	ENSLOCG00000000093	rtca	99	73.425	Lepisosteus_oculatus
ENSKMAG00000006651	rtca	98	71.468	ENSLAFG00000001473	RTCA	99	71.468	Loxodonta_africana
ENSKMAG00000006651	rtca	98	72.022	ENSMFAG00000034132	RTCA	99	72.022	Macaca_fascicularis
ENSKMAG00000006651	rtca	98	72.022	ENSMMUG00000019105	RTCA	99	72.022	Macaca_mulatta
ENSKMAG00000006651	rtca	84	71.197	ENSMNEG00000037163	RTCA	100	71.197	Macaca_nemestrina
ENSKMAG00000006651	rtca	98	59.280	ENSMLEG00000042151	RTCA	98	59.280	Mandrillus_leucophaeus
ENSKMAG00000006651	rtca	99	91.209	ENSMAMG00000016536	rtca	100	91.209	Mastacembelus_armatus
ENSKMAG00000006651	rtca	100	89.891	ENSMZEG00005017945	rtca	100	89.891	Maylandia_zebra
ENSKMAG00000006651	rtca	87	69.182	ENSMGAG00000006892	RTCA	99	69.182	Meleagris_gallopavo
ENSKMAG00000006651	rtca	99	72.951	ENSMAUG00000008488	Rtca	100	72.951	Mesocricetus_auratus
ENSKMAG00000006651	rtca	84	72.816	ENSMICG00000008643	RTCA	100	72.816	Microcebus_murinus
ENSKMAG00000006651	rtca	99	72.404	ENSMOCG00000016660	Rtca	100	72.404	Microtus_ochrogaster
ENSKMAG00000006651	rtca	84	90.228	ENSMMOG00000007750	rtca	100	90.228	Mola_mola
ENSKMAG00000006651	rtca	98	71.468	ENSMODG00000003557	RTCA	99	71.468	Monodelphis_domestica
ENSKMAG00000006651	rtca	99	90.934	ENSMALG00000020844	rtca	100	90.934	Monopterus_albus
ENSKMAG00000006651	rtca	99	71.858	MGP_CAROLIEiJ_G0025565	Rtca	100	71.858	Mus_caroli
ENSKMAG00000006651	rtca	99	71.585	ENSMUSG00000000339	Rtca	100	71.831	Mus_musculus
ENSKMAG00000006651	rtca	99	71.858	MGP_PahariEiJ_G0027011	Rtca	100	71.858	Mus_pahari
ENSKMAG00000006651	rtca	99	71.858	MGP_SPRETEiJ_G0026515	Rtca	100	71.858	Mus_spretus
ENSKMAG00000006651	rtca	99	71.858	ENSMPUG00000012119	RTCA	100	71.858	Mustela_putorius_furo
ENSKMAG00000006651	rtca	98	69.337	ENSMLUG00000009922	RTCA	99	69.337	Myotis_lucifugus
ENSKMAG00000006651	rtca	98	72.299	ENSNGAG00000011540	Rtca	98	72.299	Nannospalax_galili
ENSKMAG00000006651	rtca	100	89.891	ENSNBRG00000003062	rtca	100	89.891	Neolamprologus_brichardi
ENSKMAG00000006651	rtca	98	71.745	ENSNLEG00000031426	RTCA	99	71.745	Nomascus_leucogenys
ENSKMAG00000006651	rtca	73	69.517	ENSOPRG00000012092	RTCA	71	69.517	Ochotona_princeps
ENSKMAG00000006651	rtca	95	72.126	ENSODEG00000006990	RTCA	96	72.365	Octodon_degus
ENSKMAG00000006651	rtca	100	89.344	ENSONIG00000007753	rtca	100	89.344	Oreochromis_niloticus
ENSKMAG00000006651	rtca	86	70.347	ENSOANG00000012055	RTCA	98	70.347	Ornithorhynchus_anatinus
ENSKMAG00000006651	rtca	99	71.311	ENSOCUG00000014247	RTCA	100	71.311	Oryctolagus_cuniculus
ENSKMAG00000006651	rtca	99	90.934	ENSORLG00000013605	rtca	100	90.934	Oryzias_latipes
ENSKMAG00000006651	rtca	99	91.209	ENSORLG00020001904	rtca	100	91.209	Oryzias_latipes_hni
ENSKMAG00000006651	rtca	99	90.934	ENSORLG00015021064	rtca	100	90.934	Oryzias_latipes_hsok
ENSKMAG00000006651	rtca	99	89.011	ENSOMEG00000000756	rtca	100	89.011	Oryzias_melastigma
ENSKMAG00000006651	rtca	98	67.036	ENSOGAG00000005627	RTCA	99	67.036	Otolemur_garnettii
ENSKMAG00000006651	rtca	86	72.327	ENSOARG00000018122	RTCA	100	72.327	Ovis_aries
ENSKMAG00000006651	rtca	98	68.984	ENSPPAG00000035119	RTCA	100	70.550	Pan_paniscus
ENSKMAG00000006651	rtca	98	72.022	ENSPPRG00000000350	RTCA	99	72.022	Panthera_pardus
ENSKMAG00000006651	rtca	98	72.022	ENSPTIG00000012816	RTCA	99	72.022	Panthera_tigris_altaica
ENSKMAG00000006651	rtca	98	68.984	ENSPTRG00000001004	RTCA	100	70.550	Pan_troglodytes
ENSKMAG00000006651	rtca	98	72.022	ENSPANG00000000346	RTCA	99	72.022	Papio_anubis
ENSKMAG00000006651	rtca	99	81.044	ENSPKIG00000001653	rtca	100	81.044	Paramormyrops_kingsleyae
ENSKMAG00000006651	rtca	99	68.219	ENSPSIG00000011408	RTCA	100	68.219	Pelodiscus_sinensis
ENSKMAG00000006651	rtca	99	72.404	ENSPEMG00000018582	Rtca	100	72.404	Peromyscus_maniculatus_bairdii
ENSKMAG00000006651	rtca	98	56.233	ENSPMAG00000009110	rtca	98	56.233	Petromyzon_marinus
ENSKMAG00000006651	rtca	98	71.468	ENSPCIG00000007684	RTCA	99	71.468	Phascolarctos_cinereus
ENSKMAG00000006651	rtca	99	90.959	ENSPFOG00000004824	rtca	100	90.959	Poecilia_formosa
ENSKMAG00000006651	rtca	100	90.984	ENSPLAG00000011753	rtca	100	90.984	Poecilia_latipinna
ENSKMAG00000006651	rtca	100	90.984	ENSPMEG00000020469	rtca	100	90.984	Poecilia_mexicana
ENSKMAG00000006651	rtca	100	91.257	ENSPREG00000001365	rtca	100	91.257	Poecilia_reticulata
ENSKMAG00000006651	rtca	98	72.022	ENSPPYG00000001115	RTCA	99	72.022	Pongo_abelii
ENSKMAG00000006651	rtca	99	68.033	ENSPCAG00000005076	RTCA	100	68.033	Procavia_capensis
ENSKMAG00000006651	rtca	98	72.576	ENSPCOG00000005603	RTCA	99	72.576	Propithecus_coquereli
ENSKMAG00000006651	rtca	98	68.182	ENSPVAG00000009478	RTCA	99	68.182	Pteropus_vampyrus
ENSKMAG00000006651	rtca	100	89.891	ENSPNYG00000004722	rtca	100	89.891	Pundamilia_nyererei
ENSKMAG00000006651	rtca	99	79.945	ENSPNAG00000022270	rtca	100	79.945	Pygocentrus_nattereri
ENSKMAG00000006651	rtca	99	71.585	ENSRNOG00000014575	Rtca	100	71.585	Rattus_norvegicus
ENSKMAG00000006651	rtca	98	68.984	ENSRBIG00000041180	RTCA	100	70.550	Rhinopithecus_bieti
ENSKMAG00000006651	rtca	98	71.468	ENSRROG00000024929	RTCA	99	71.468	Rhinopithecus_roxellana
ENSKMAG00000006651	rtca	98	71.191	ENSSBOG00000028626	RTCA	99	71.191	Saimiri_boliviensis_boliviensis
ENSKMAG00000006651	rtca	98	72.299	ENSSHAG00000001758	RTCA	99	72.299	Sarcophilus_harrisii
ENSKMAG00000006651	rtca	98	86.667	ENSSMAG00000014680	rtca	97	86.667	Scophthalmus_maximus
ENSKMAG00000006651	rtca	98	90.223	ENSSDUG00000015585	rtca	100	88.378	Seriola_dumerili
ENSKMAG00000006651	rtca	95	90.544	ENSSLDG00000018985	rtca	95	90.544	Seriola_lalandi_dorsalis
ENSKMAG00000006651	rtca	86	66.562	ENSSARG00000013993	RTCA	100	66.562	Sorex_araneus
ENSKMAG00000006651	rtca	100	89.344	ENSSPAG00000011938	rtca	100	89.344	Stegastes_partitus
ENSKMAG00000006651	rtca	98	72.853	ENSSSCG00000006865	RTCA	99	72.853	Sus_scrofa
ENSKMAG00000006651	rtca	99	69.041	ENSTGUG00000005154	RTCA	100	69.041	Taeniopygia_guttata
ENSKMAG00000006651	rtca	99	87.912	ENSTRUG00000008799	rtca	100	87.912	Takifugu_rubripes
ENSKMAG00000006651	rtca	99	85.714	ENSTNIG00000004725	rtca	100	85.714	Tetraodon_nigroviridis
ENSKMAG00000006651	rtca	57	58.095	ENSTBEG00000000943	RTCA	59	58.095	Tupaia_belangeri
ENSKMAG00000006651	rtca	98	70.321	ENSTTRG00000015327	RTCA	99	70.321	Tursiops_truncatus
ENSKMAG00000006651	rtca	91	72.239	ENSUAMG00000017265	RTCA	94	72.239	Ursus_americanus
ENSKMAG00000006651	rtca	98	71.745	ENSUMAG00000007881	RTCA	99	71.745	Ursus_maritimus
ENSKMAG00000006651	rtca	86	63.722	ENSVPAG00000001039	RTCA	84	63.722	Vicugna_pacos
ENSKMAG00000006651	rtca	98	72.022	ENSVVUG00000022041	RTCA	67	72.022	Vulpes_vulpes
ENSKMAG00000006651	rtca	98	57.300	ENSXETG00000031661	RTCA	98	57.300	Xenopus_tropicalis
ENSKMAG00000006651	rtca	99	79.396	ENSXCOG00000008002	rtca	100	79.396	Xiphophorus_couchianus
ENSKMAG00000006651	rtca	100	90.437	ENSXMAG00000005482	rtca	100	90.437	Xiphophorus_maculatus