EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000006800 (Gene tree)
Gene ID: 108244608
Gene Symbol: larp4aa
Alias: larp4a|si:ch211-156j22.2
Full Name: la-related protein 4
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 12829 bases
Position: chrLWHD01000145.1:801313-814141
Accession: 108244608
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000009067	La	PF05383.17	2.3e-17	1	1
ENSKMAP00000009041	La	PF05383.17	2.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000009175	-	5469	XM_017430960	ENSKMAP00000009041	796 (aa)	XP_017286449	UPI0007F8B5E1
ENSKMAT00000009201	-	5427	XM_017430961	ENSKMAP00000009067	782 (aa)	XP_017286450	UPI0007F8A967

Gene Model

Click here to download ENSKMAG00000006800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000006800's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000006800	larp4aa	95	50.000	ENSKMAG00000018556	larp4ab	100	49.428
ENSKMAG00000006800	larp4aa	76	41.176	ENSKMAG00000021674	LARP4B	74	42.342

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000006800	larp4aa	82	63.102	ENSG00000161813	LARP4	94	67.582	Homo_sapiens
ENSKMAG00000006800	larp4aa	100	84.901	ENSAPOG00000007142	larp4aa	100	85.272	Acanthochromis_polyacanthus
ENSKMAG00000006800	larp4aa	95	51.658	ENSAPOG00000021331	larp4ab	100	52.057	Acanthochromis_polyacanthus
ENSKMAG00000006800	larp4aa	100	79.193	ENSACIG00000001198	larp4aa	100	80.832	Amphilophus_citrinellus
ENSKMAG00000006800	larp4aa	100	85.644	ENSAOCG00000002408	larp4aa	100	86.510	Amphiprion_ocellaris
ENSKMAG00000006800	larp4aa	95	50.641	ENSAOCG00000006387	larp4ab	100	50.639	Amphiprion_ocellaris
ENSKMAG00000006800	larp4aa	100	85.396	ENSAPEG00000019058	larp4aa	100	86.262	Amphiprion_percula
ENSKMAG00000006800	larp4aa	95	50.257	ENSATEG00000001018	larp4ab	100	49.552	Anabas_testudineus
ENSKMAG00000006800	larp4aa	100	84.025	ENSATEG00000020715	larp4aa	100	84.403	Anabas_testudineus
ENSKMAG00000006800	larp4aa	95	51.026	ENSAPLG00000013661	LARP4	99	51.546	Anas_platyrhynchos
ENSKMAG00000006800	larp4aa	95	50.841	ENSACAG00000017133	LARP4	96	50.000	Anolis_carolinensis
ENSKMAG00000006800	larp4aa	87	61.940	ENSANAG00000029342	LARP4	98	63.395	Aotus_nancymaae
ENSKMAG00000006800	larp4aa	100	80.736	ENSACLG00000002575	larp4aa	100	81.227	Astatotilapia_calliptera
ENSKMAG00000006800	larp4aa	100	51.519	ENSAMXG00000001515	larp4ab	100	52.657	Astyanax_mexicanus
ENSKMAG00000006800	larp4aa	100	63.855	ENSAMXG00000036493	larp4aa	100	65.060	Astyanax_mexicanus
ENSKMAG00000006800	larp4aa	87	61.194	ENSCJAG00000021131	LARP4	97	63.271	Callithrix_jacchus
ENSKMAG00000006800	larp4aa	82	62.162	ENSCAFG00020014554	LARP4	99	59.441	Canis_lupus_dingo
ENSKMAG00000006800	larp4aa	95	48.943	ENSTSYG00000004342	LARP4	98	64.191	Carlito_syrichta
ENSKMAG00000006800	larp4aa	94	38.281	ENSCAPG00000012942	LARP4	79	56.364	Cavia_aperea
ENSKMAG00000006800	larp4aa	95	44.037	ENSCPOG00000020519	LARP4	99	44.619	Cavia_porcellus
ENSKMAG00000006800	larp4aa	87	60.886	ENSCCAG00000024439	LARP4	98	62.632	Cebus_capucinus
ENSKMAG00000006800	larp4aa	95	46.883	ENSCATG00000044528	LARP4	99	47.341	Cercocebus_atys
ENSKMAG00000006800	larp4aa	95	47.396	ENSCLAG00000001829	LARP4	99	48.047	Chinchilla_lanigera
ENSKMAG00000006800	larp4aa	96	51.008	ENSCPBG00000019407	LARP4	90	51.154	Chrysemys_picta_bellii
ENSKMAG00000006800	larp4aa	95	43.742	ENSCANG00000033097	-	87	62.914	Colobus_angolensis_palliatus
ENSKMAG00000006800	larp4aa	82	63.710	ENSCANG00000029159	-	98	63.395	Colobus_angolensis_palliatus
ENSKMAG00000006800	larp4aa	95	48.834	ENSCGRG00001010818	Larp4	99	49.235	Cricetulus_griseus_chok1gshd
ENSKMAG00000006800	larp4aa	95	49.223	ENSCGRG00000009382	Larp4	100	49.235	Cricetulus_griseus_crigri
ENSKMAG00000006800	larp4aa	69	51.167	ENSCSEG00000003240	larp4ab	92	48.217	Cynoglossus_semilaevis
ENSKMAG00000006800	larp4aa	100	80.539	ENSCSEG00000001963	larp4aa	100	81.028	Cynoglossus_semilaevis
ENSKMAG00000006800	larp4aa	100	84.406	ENSCVAG00000005488	larp4aa	100	85.025	Cyprinodon_variegatus
ENSKMAG00000006800	larp4aa	100	62.546	ENSDARG00000078401	larp4aa	100	62.347	Danio_rerio
ENSKMAG00000006800	larp4aa	95	52.276	ENSDARG00000074979	larp4ab	80	85.211	Danio_rerio
ENSKMAG00000006800	larp4aa	54	86.667	ENSETEG00000011683	LARP4	56	86.667	Echinops_telfairi
ENSKMAG00000006800	larp4aa	56	55.303	ENSEBUG00000010394	LARP4	70	53.261	Eptatretus_burgeri
ENSKMAG00000006800	larp4aa	58	43.271	ENSEBUG00000004426	LARP4	51	55.102	Eptatretus_burgeri
ENSKMAG00000006800	larp4aa	66	59.072	ENSEASG00005004356	LARP4	100	59.072	Equus_asinus_asinus
ENSKMAG00000006800	larp4aa	52	85.470	ENSEEUG00000000316	LARP4	69	85.470	Erinaceus_europaeus
ENSKMAG00000006800	larp4aa	95	53.219	ENSELUG00000018650	larp4ab	85	78.509	Esox_lucius
ENSKMAG00000006800	larp4aa	100	61.595	ENSELUG00000000395	larp4aa	100	61.009	Esox_lucius
ENSKMAG00000006800	larp4aa	82	63.467	ENSFCAG00000031897	LARP4	98	63.158	Felis_catus
ENSKMAG00000006800	larp4aa	80	52.403	ENSFALG00000002114	LARP4	95	52.542	Ficedula_albicollis
ENSKMAG00000006800	larp4aa	100	83.170	ENSFHEG00000004338	larp4aa	100	83.784	Fundulus_heteroclitus
ENSKMAG00000006800	larp4aa	95	46.124	ENSFHEG00000013854	larp4ab	99	45.740	Fundulus_heteroclitus
ENSKMAG00000006800	larp4aa	100	72.843	ENSGMOG00000008246	larp4aa	100	72.716	Gadus_morhua
ENSKMAG00000006800	larp4aa	91	48.465	ENSGALG00000042122	LARP4	92	49.732	Gallus_gallus
ENSKMAG00000006800	larp4aa	95	47.815	ENSGAFG00000021777	larp4ab	99	47.165	Gambusia_affinis
ENSKMAG00000006800	larp4aa	95	48.931	ENSGACG00000000680	larp4ab	99	51.381	Gasterosteus_aculeatus
ENSKMAG00000006800	larp4aa	100	79.267	ENSGACG00000008381	larp4aa	98	88.366	Gasterosteus_aculeatus
ENSKMAG00000006800	larp4aa	95	51.476	ENSGAGG00000006969	LARP4	99	51.220	Gopherus_agassizii
ENSKMAG00000006800	larp4aa	84	62.857	ENSGGOG00000015230	LARP4	99	61.624	Gorilla_gorilla
ENSKMAG00000006800	larp4aa	100	80.491	ENSHBUG00000023074	larp4aa	100	80.982	Haplochromis_burtoni
ENSKMAG00000006800	larp4aa	80	49.454	ENSHGLG00000013875	-	96	48.986	Heterocephalus_glaber_female
ENSKMAG00000006800	larp4aa	95	46.470	ENSHGLG00100011678	-	99	45.455	Heterocephalus_glaber_male
ENSKMAG00000006800	larp4aa	95	46.405	ENSHCOG00000020857	larp4ab	100	46.144	Hippocampus_comes
ENSKMAG00000006800	larp4aa	100	75.217	ENSHCOG00000015951	larp4aa	100	75.093	Hippocampus_comes
ENSKMAG00000006800	larp4aa	95	48.362	ENSIPUG00000021659	larp4ab	73	56.140	Ictalurus_punctatus
ENSKMAG00000006800	larp4aa	100	62.244	ENSIPUG00000007514	larp4aa	100	62.606	Ictalurus_punctatus
ENSKMAG00000006800	larp4aa	97	82.836	ENSLBEG00000014537	larp4aa	100	81.981	Labrus_bergylta
ENSKMAG00000006800	larp4aa	95	50.779	ENSLBEG00000019306	larp4ab	100	50.258	Labrus_bergylta
ENSKMAG00000006800	larp4aa	99	50.427	ENSLACG00000019090	LARP4	99	50.699	Latimeria_chalumnae
ENSKMAG00000006800	larp4aa	100	58.896	ENSLOCG00000007113	larp4ab	100	59.755	Lepisosteus_oculatus
ENSKMAG00000006800	larp4aa	81	48.372	ENSLAFG00000005160	LARP4	99	47.927	Loxodonta_africana
ENSKMAG00000006800	larp4aa	82	63.710	ENSMFAG00000043681	LARP4	98	63.395	Macaca_fascicularis
ENSKMAG00000006800	larp4aa	82	63.710	ENSMMUG00000008172	LARP4	98	63.395	Macaca_mulatta
ENSKMAG00000006800	larp4aa	94	47.550	ENSMNEG00000034602	LARP4	98	50.143	Macaca_nemestrina
ENSKMAG00000006800	larp4aa	78	51.479	ENSMNEG00000037799	-	83	70.000	Macaca_nemestrina
ENSKMAG00000006800	larp4aa	82	63.710	ENSMLEG00000039661	LARP4	98	63.395	Mandrillus_leucophaeus
ENSKMAG00000006800	larp4aa	95	51.488	ENSMAMG00000002616	larp4ab	100	51.813	Mastacembelus_armatus
ENSKMAG00000006800	larp4aa	100	85.573	ENSMAMG00000011206	larp4aa	100	85.573	Mastacembelus_armatus
ENSKMAG00000006800	larp4aa	100	80.613	ENSMZEG00005001813	larp4aa	100	81.227	Maylandia_zebra
ENSKMAG00000006800	larp4aa	91	48.090	ENSMGAG00000010598	LARP4	92	49.457	Meleagris_gallopavo
ENSKMAG00000006800	larp4aa	80	63.764	ENSMICG00000030156	-	89	62.437	Microcebus_murinus
ENSKMAG00000006800	larp4aa	69	76.923	ENSMICG00000012388	-	97	84.615	Microcebus_murinus
ENSKMAG00000006800	larp4aa	100	78.298	ENSMMOG00000004785	larp4aa	100	77.998	Mola_mola
ENSKMAG00000006800	larp4aa	95	47.889	ENSMMOG00000021861	larp4ab	92	58.571	Mola_mola
ENSKMAG00000006800	larp4aa	73	63.253	MGP_CAROLIEiJ_G0020281	Larp4	85	62.874	Mus_caroli
ENSKMAG00000006800	larp4aa	95	47.282	ENSMUSG00000023025	Larp4	99	48.951	Mus_musculus
ENSKMAG00000006800	larp4aa	100	80.491	ENSNBRG00000011292	larp4aa	100	80.491	Neolamprologus_brichardi
ENSKMAG00000006800	larp4aa	87	61.852	ENSNLEG00000017798	LARP4	98	63.061	Nomascus_leucogenys
ENSKMAG00000006800	larp4aa	95	47.237	ENSODEG00000009770	LARP4	100	48.289	Octodon_degus
ENSKMAG00000006800	larp4aa	100	81.579	ENSONIG00000011895	larp4aa	100	81.955	Oreochromis_niloticus
ENSKMAG00000006800	larp4aa	95	48.057	ENSONIG00000019124	larp4ab	99	47.736	Oreochromis_niloticus
ENSKMAG00000006800	larp4aa	65	55.102	ENSOANG00000004373	LARP4	93	54.731	Ornithorhynchus_anatinus
ENSKMAG00000006800	larp4aa	95	48.597	ENSOCUG00000021417	-	99	47.903	Oryctolagus_cuniculus
ENSKMAG00000006800	larp4aa	95	48.917	ENSOCUG00000026872	-	99	47.843	Oryctolagus_cuniculus
ENSKMAG00000006800	larp4aa	100	78.536	ENSORLG00000006758	larp4aa	100	78.040	Oryzias_latipes
ENSKMAG00000006800	larp4aa	100	78.207	ENSORLG00020010258	larp4aa	100	78.164	Oryzias_latipes_hni
ENSKMAG00000006800	larp4aa	100	77.958	ENSORLG00015002292	larp4aa	100	77.543	Oryzias_latipes_hsok
ENSKMAG00000006800	larp4aa	100	75.780	ENSOMEG00000019749	larp4aa	95	85.511	Oryzias_melastigma
ENSKMAG00000006800	larp4aa	65	49.468	ENSOGAG00000001415	LARP4	99	53.846	Otolemur_garnettii
ENSKMAG00000006800	larp4aa	66	63.117	ENSPPAG00000035100	LARP4	86	62.797	Pan_paniscus
ENSKMAG00000006800	larp4aa	82	63.467	ENSPPRG00000004522	LARP4	98	63.158	Panthera_pardus
ENSKMAG00000006800	larp4aa	82	63.467	ENSPTIG00000015617	LARP4	98	63.158	Panthera_tigris_altaica
ENSKMAG00000006800	larp4aa	82	63.102	ENSPTRG00000004935	LARP4	99	61.993	Pan_troglodytes
ENSKMAG00000006800	larp4aa	82	64.611	ENSPANG00000022964	LARP4	98	64.286	Papio_anubis
ENSKMAG00000006800	larp4aa	100	59.375	ENSPKIG00000005950	larp4ab	99	59.975	Paramormyrops_kingsleyae
ENSKMAG00000006800	larp4aa	53	57.312	ENSPMAG00000002788	LARP4	79	57.364	Petromyzon_marinus
ENSKMAG00000006800	larp4aa	96	50.384	ENSPCIG00000000384	LARP4	99	49.616	Phascolarctos_cinereus
ENSKMAG00000006800	larp4aa	95	48.047	ENSPFOG00000009764	larp4ab	99	47.120	Poecilia_formosa
ENSKMAG00000006800	larp4aa	100	85.254	ENSPFOG00000013148	larp4aa	100	85.626	Poecilia_formosa
ENSKMAG00000006800	larp4aa	95	47.917	ENSPLAG00000008502	larp4ab	99	47.532	Poecilia_latipinna
ENSKMAG00000006800	larp4aa	100	85.120	ENSPLAG00000013626	larp4aa	100	85.498	Poecilia_latipinna
ENSKMAG00000006800	larp4aa	95	47.893	ENSPMEG00000002720	larp4ab	99	46.811	Poecilia_mexicana
ENSKMAG00000006800	larp4aa	100	85.130	ENSPMEG00000014271	larp4aa	100	85.502	Poecilia_mexicana
ENSKMAG00000006800	larp4aa	100	85.354	ENSPREG00000022597	larp4aa	100	85.606	Poecilia_reticulata
ENSKMAG00000006800	larp4aa	64	55.198	ENSPPYG00000004512	-	98	55.832	Pongo_abelii
ENSKMAG00000006800	larp4aa	72	67.014	ENSPCAG00000003671	LARP4	81	67.014	Procavia_capensis
ENSKMAG00000006800	larp4aa	81	63.733	ENSPCOG00000026291	LARP4	98	63.838	Propithecus_coquereli
ENSKMAG00000006800	larp4aa	100	80.736	ENSPNYG00000022265	larp4aa	100	81.227	Pundamilia_nyererei
ENSKMAG00000006800	larp4aa	100	53.455	ENSPNAG00000014478	larp4ab	99	55.344	Pygocentrus_nattereri
ENSKMAG00000006800	larp4aa	96	61.721	ENSPNAG00000024770	larp4aa	99	62.843	Pygocentrus_nattereri
ENSKMAG00000006800	larp4aa	81	54.771	ENSRBIG00000038857	-	91	63.807	Rhinopithecus_bieti
ENSKMAG00000006800	larp4aa	69	55.422	ENSRBIG00000036890	-	99	55.422	Rhinopithecus_bieti
ENSKMAG00000006800	larp4aa	69	55.422	ENSRROG00000025487	-	99	55.422	Rhinopithecus_roxellana
ENSKMAG00000006800	larp4aa	82	63.710	ENSRROG00000042764	-	98	63.807	Rhinopithecus_roxellana
ENSKMAG00000006800	larp4aa	87	60.448	ENSSBOG00000026650	LARP4	98	62.334	Saimiri_boliviensis_boliviensis
ENSKMAG00000006800	larp4aa	99	59.566	ENSSFOG00015003868	larp4aa	99	62.179	Scleropages_formosus
ENSKMAG00000006800	larp4aa	100	58.486	ENSSFOG00015014096	larp4ab	100	58.902	Scleropages_formosus
ENSKMAG00000006800	larp4aa	100	82.143	ENSSMAG00000019473	larp4aa	100	82.077	Scophthalmus_maximus
ENSKMAG00000006800	larp4aa	95	51.715	ENSSMAG00000002838	larp4ab	100	51.908	Scophthalmus_maximus
ENSKMAG00000006800	larp4aa	100	85.820	ENSSDUG00000010621	larp4aa	100	86.683	Seriola_dumerili
ENSKMAG00000006800	larp4aa	95	51.282	ENSSDUG00000006655	larp4ab	100	52.107	Seriola_dumerili
ENSKMAG00000006800	larp4aa	95	52.036	ENSSLDG00000001791	larp4ab	100	52.375	Seriola_lalandi_dorsalis
ENSKMAG00000006800	larp4aa	100	85.203	ENSSLDG00000004942	larp4aa	100	86.067	Seriola_lalandi_dorsalis
ENSKMAG00000006800	larp4aa	64	61.954	ENSSARG00000012469	LARP4	92	53.043	Sorex_araneus
ENSKMAG00000006800	larp4aa	90	48.243	ENSSPUG00000016552	LARP4	92	48.853	Sphenodon_punctatus
ENSKMAG00000006800	larp4aa	86	90.152	ENSSPAG00000007222	larp4aa	93	90.152	Stegastes_partitus
ENSKMAG00000006800	larp4aa	95	51.542	ENSSPAG00000002172	larp4ab	100	51.410	Stegastes_partitus
ENSKMAG00000006800	larp4aa	58	67.178	ENSSSCG00000028516	LARP4	99	48.948	Sus_scrofa
ENSKMAG00000006800	larp4aa	95	48.638	ENSTGUG00000003479	LARP4	99	49.676	Taeniopygia_guttata
ENSKMAG00000006800	larp4aa	95	48.512	ENSTRUG00000007206	larp4ab	100	47.607	Takifugu_rubripes
ENSKMAG00000006800	larp4aa	96	74.770	ENSTNIG00000015109	larp4aa	99	74.836	Tetraodon_nigroviridis
ENSKMAG00000006800	larp4aa	95	46.213	ENSTNIG00000014571	larp4ab	100	46.044	Tetraodon_nigroviridis
ENSKMAG00000006800	larp4aa	80	54.070	ENSTBEG00000005167	LARP4	84	54.070	Tupaia_belangeri
ENSKMAG00000006800	larp4aa	95	47.718	ENSTTRG00000003764	LARP4	88	63.144	Tursiops_truncatus
ENSKMAG00000006800	larp4aa	84	63.089	ENSVVUG00000024717	LARP4	99	59.441	Vulpes_vulpes
ENSKMAG00000006800	larp4aa	87	51.293	ENSXETG00000007283	larp4	99	49.171	Xenopus_tropicalis
ENSKMAG00000006800	larp4aa	100	80.149	ENSXCOG00000006387	larp4aa	100	80.397	Xiphophorus_couchianus
ENSKMAG00000006800	larp4aa	100	86.352	ENSXMAG00000010519	larp4aa	100	85.608	Xiphophorus_maculatus
ENSKMAG00000006800	larp4aa	95	47.949	ENSXMAG00000002156	larp4ab	99	47.074	Xiphophorus_maculatus