EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000006944 (Gene tree)
Gene ID: 108237713
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 5928 bases
Position: chrLWHD01000048.1:984902-990829
Accession: 108237713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000009259	tRNA_int_end_N2	PF12928.7	5.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000009394	-	2254	XM_017419338	ENSKMAP00000009259	524 (aa)	XP_017274827	UPI0007F8FB1D

Gene Model

Click here to download ENSKMAG00000006944's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000006944's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000006944	tsen54	97	45.472	ENSG00000182173	TSEN54	100	62.500	Homo_sapiens
ENSKMAG00000006944	tsen54	100	71.563	ENSAPOG00000009659	tsen54	98	71.563	Acanthochromis_polyacanthus
ENSKMAG00000006944	tsen54	96	46.065	ENSAMEG00000009414	TSEN54	96	46.947	Ailuropoda_melanoleuca
ENSKMAG00000006944	tsen54	100	72.642	ENSAOCG00000000152	tsen54	98	72.642	Amphiprion_ocellaris
ENSKMAG00000006944	tsen54	100	72.264	ENSAPEG00000018931	tsen54	98	72.264	Amphiprion_percula
ENSKMAG00000006944	tsen54	100	68.864	ENSATEG00000019860	tsen54	100	69.414	Anabas_testudineus
ENSKMAG00000006944	tsen54	86	44.946	ENSAPLG00000009419	TSEN54	99	44.946	Anas_platyrhynchos
ENSKMAG00000006944	tsen54	97	47.619	ENSACAG00000006714	TSEN54	98	47.818	Anolis_carolinensis
ENSKMAG00000006944	tsen54	97	45.543	ENSANAG00000024061	TSEN54	96	46.667	Aotus_nancymaae
ENSKMAG00000006944	tsen54	100	69.850	ENSACLG00000019800	tsen54	100	69.850	Astatotilapia_calliptera
ENSKMAG00000006944	tsen54	97	56.202	ENSAMXG00000006546	tsen54	97	56.783	Astyanax_mexicanus
ENSKMAG00000006944	tsen54	97	45.889	ENSBTAG00000000824	TSEN54	97	47.048	Bos_taurus
ENSKMAG00000006944	tsen54	97	45.349	ENSCJAG00000014278	TSEN54	96	47.115	Callithrix_jacchus
ENSKMAG00000006944	tsen54	97	45.731	ENSCAFG00000004798	TSEN54	97	46.792	Canis_familiaris
ENSKMAG00000006944	tsen54	97	45.731	ENSCAFG00020000312	TSEN54	97	46.792	Canis_lupus_dingo
ENSKMAG00000006944	tsen54	97	44.821	ENSCHIG00000019908	TSEN54	97	45.198	Capra_hircus
ENSKMAG00000006944	tsen54	86	44.068	ENSTSYG00000037439	TSEN54	99	44.958	Carlito_syrichta
ENSKMAG00000006944	tsen54	97	45.385	ENSCCAG00000036624	TSEN54	96	46.095	Cebus_capucinus
ENSKMAG00000006944	tsen54	97	46.272	ENSCATG00000042877	TSEN54	96	46.154	Cercocebus_atys
ENSKMAG00000006944	tsen54	97	47.048	ENSCLAG00000002924	TSEN54	96	47.338	Chinchilla_lanigera
ENSKMAG00000006944	tsen54	97	45.472	ENSCSAG00000004809	TSEN54	97	46.341	Chlorocebus_sabaeus
ENSKMAG00000006944	tsen54	97	47.529	ENSCPBG00000028071	TSEN54	98	47.538	Chrysemys_picta_bellii
ENSKMAG00000006944	tsen54	97	46.272	ENSCANG00000028053	TSEN54	97	46.154	Colobus_angolensis_palliatus
ENSKMAG00000006944	tsen54	97	44.933	ENSCGRG00001020029	Tsen54	97	44.933	Cricetulus_griseus_chok1gshd
ENSKMAG00000006944	tsen54	84	43.202	ENSCGRG00000016289	Tsen54	99	43.202	Cricetulus_griseus_crigri
ENSKMAG00000006944	tsen54	81	57.506	ENSCSEG00000020586	tsen54	99	57.506	Cynoglossus_semilaevis
ENSKMAG00000006944	tsen54	81	54.398	ENSDARG00000036844	tsen54	100	55.220	Danio_rerio
ENSKMAG00000006944	tsen54	97	44.886	ENSDNOG00000018452	TSEN54	97	45.644	Dasypus_novemcinctus
ENSKMAG00000006944	tsen54	97	45.905	ENSDORG00000004073	Tsen54	97	45.644	Dipodomys_ordii
ENSKMAG00000006944	tsen54	95	32.216	ENSEBUG00000005203	TSEN54	94	32.216	Eptatretus_burgeri
ENSKMAG00000006944	tsen54	97	45.216	ENSEASG00005000579	TSEN54	97	45.216	Equus_asinus_asinus
ENSKMAG00000006944	tsen54	97	45.028	ENSECAG00000004924	TSEN54	97	45.028	Equus_caballus
ENSKMAG00000006944	tsen54	86	43.844	ENSEEUG00000008467	TSEN54	99	44.060	Erinaceus_europaeus
ENSKMAG00000006944	tsen54	99	57.728	ENSELUG00000017703	tsen54	92	58.473	Esox_lucius
ENSKMAG00000006944	tsen54	97	45.714	ENSFCAG00000023712	TSEN54	97	46.970	Felis_catus
ENSKMAG00000006944	tsen54	93	45.347	ENSFALG00000001119	TSEN54	92	46.245	Ficedula_albicollis
ENSKMAG00000006944	tsen54	86	45.745	ENSFDAG00000019090	TSEN54	99	45.745	Fukomys_damarensis
ENSKMAG00000006944	tsen54	100	74.053	ENSFHEG00000005470	tsen54	100	74.242	Fundulus_heteroclitus
ENSKMAG00000006944	tsen54	80	57.513	ENSGMOG00000013146	tsen54	99	57.513	Gadus_morhua
ENSKMAG00000006944	tsen54	96	42.857	ENSGALG00000047163	TSEN54	99	42.857	Gallus_gallus
ENSKMAG00000006944	tsen54	100	70.644	ENSGAFG00000005111	tsen54	100	70.644	Gambusia_affinis
ENSKMAG00000006944	tsen54	97	62.818	ENSGACG00000014987	tsen54	100	62.768	Gasterosteus_aculeatus
ENSKMAG00000006944	tsen54	97	48.099	ENSGAGG00000006825	TSEN54	96	48.099	Gopherus_agassizii
ENSKMAG00000006944	tsen54	96	45.525	ENSGGOG00000009417	TSEN54	99	46.780	Gorilla_gorilla
ENSKMAG00000006944	tsen54	90	68.802	ENSHBUG00000018296	tsen54	92	68.802	Haplochromis_burtoni
ENSKMAG00000006944	tsen54	97	46.881	ENSHGLG00000007979	TSEN54	97	46.881	Heterocephalus_glaber_female
ENSKMAG00000006944	tsen54	97	45.817	ENSHGLG00100005497	TSEN54	97	45.817	Heterocephalus_glaber_male
ENSKMAG00000006944	tsen54	81	60.460	ENSHCOG00000007481	tsen54	100	60.690	Hippocampus_comes
ENSKMAG00000006944	tsen54	98	52.703	ENSIPUG00000000590	tsen54	97	52.703	Ictalurus_punctatus
ENSKMAG00000006944	tsen54	97	44.914	ENSSTOG00000012883	TSEN54	97	44.914	Ictidomys_tridecemlineatus
ENSKMAG00000006944	tsen54	97	46.355	ENSJJAG00000007365	Tsen54	97	46.355	Jaculus_jaculus
ENSKMAG00000006944	tsen54	100	67.978	ENSLBEG00000004199	tsen54	100	67.978	Labrus_bergylta
ENSKMAG00000006944	tsen54	97	42.533	ENSLACG00000009497	TSEN54	99	42.533	Latimeria_chalumnae
ENSKMAG00000006944	tsen54	98	54.198	ENSLOCG00000011191	tsen54	97	54.580	Lepisosteus_oculatus
ENSKMAG00000006944	tsen54	92	46.906	ENSLAFG00000011655	TSEN54	92	47.791	Loxodonta_africana
ENSKMAG00000006944	tsen54	97	45.472	ENSMFAG00000000712	TSEN54	97	46.341	Macaca_fascicularis
ENSKMAG00000006944	tsen54	97	45.472	ENSMNEG00000029199	TSEN54	97	46.341	Macaca_nemestrina
ENSKMAG00000006944	tsen54	86	44.252	ENSMLEG00000044168	TSEN54	88	45.263	Mandrillus_leucophaeus
ENSKMAG00000006944	tsen54	100	68.620	ENSMAMG00000019773	tsen54	100	69.070	Mastacembelus_armatus
ENSKMAG00000006944	tsen54	100	69.476	ENSMZEG00005000884	tsen54	100	69.476	Maylandia_zebra
ENSKMAG00000006944	tsen54	93	42.800	ENSMGAG00000009556	TSEN54	92	42.800	Meleagris_gallopavo
ENSKMAG00000006944	tsen54	97	44.737	ENSMAUG00000016838	Tsen54	97	44.737	Mesocricetus_auratus
ENSKMAG00000006944	tsen54	97	45.841	ENSMICG00000044012	TSEN54	96	46.449	Microcebus_murinus
ENSKMAG00000006944	tsen54	97	46.198	ENSMOCG00000021585	Tsen54	97	46.198	Microtus_ochrogaster
ENSKMAG00000006944	tsen54	96	60.583	ENSMMOG00000020189	tsen54	99	61.359	Mola_mola
ENSKMAG00000006944	tsen54	97	44.571	ENSMODG00000007438	TSEN54	95	44.571	Monodelphis_domestica
ENSKMAG00000006944	tsen54	99	68.773	ENSMALG00000020573	tsen54	99	69.331	Monopterus_albus
ENSKMAG00000006944	tsen54	97	45.833	MGP_CAROLIEiJ_G0017417	Tsen54	97	45.833	Mus_caroli
ENSKMAG00000006944	tsen54	97	46.780	ENSMUSG00000020781	Tsen54	97	46.780	Mus_musculus
ENSKMAG00000006944	tsen54	97	46.212	MGP_PahariEiJ_G0018547	Tsen54	97	46.212	Mus_pahari
ENSKMAG00000006944	tsen54	97	46.212	MGP_SPRETEiJ_G0018262	Tsen54	97	46.212	Mus_spretus
ENSKMAG00000006944	tsen54	97	43.238	ENSMPUG00000013870	TSEN54	97	44.697	Mustela_putorius_furo
ENSKMAG00000006944	tsen54	97	43.969	ENSMLUG00000015298	TSEN54	96	45.155	Myotis_lucifugus
ENSKMAG00000006944	tsen54	97	45.472	ENSNGAG00000015673	Tsen54	97	45.472	Nannospalax_galili
ENSKMAG00000006944	tsen54	89	41.513	ENSMEUG00000011908	TSEN54	99	41.513	Notamacropus_eugenii
ENSKMAG00000006944	tsen54	99	41.760	ENSOPRG00000012513	TSEN54	99	41.760	Ochotona_princeps
ENSKMAG00000006944	tsen54	100	71.028	ENSONIG00000009543	tsen54	100	71.028	Oreochromis_niloticus
ENSKMAG00000006944	tsen54	97	41.353	ENSOCUG00000009875	TSEN54	97	42.322	Oryctolagus_cuniculus
ENSKMAG00000006944	tsen54	100	62.453	ENSORLG00000000852	tsen54	100	62.453	Oryzias_latipes
ENSKMAG00000006944	tsen54	100	62.830	ENSORLG00020018221	tsen54	100	62.830	Oryzias_latipes_hni
ENSKMAG00000006944	tsen54	98	63.077	ENSORLG00015009413	tsen54	99	63.077	Oryzias_latipes_hsok
ENSKMAG00000006944	tsen54	100	63.447	ENSOMEG00000014402	tsen54	97	63.447	Oryzias_melastigma
ENSKMAG00000006944	tsen54	97	44.972	ENSOGAG00000001442	TSEN54	97	44.972	Otolemur_garnettii
ENSKMAG00000006944	tsen54	86	42.796	ENSOARG00000010361	TSEN54	99	44.111	Ovis_aries
ENSKMAG00000006944	tsen54	97	45.905	ENSPPRG00000009162	TSEN54	97	47.159	Panthera_pardus
ENSKMAG00000006944	tsen54	86	44.111	ENSPTIG00000019312	TSEN54	96	45.106	Panthera_tigris_altaica
ENSKMAG00000006944	tsen54	97	45.665	ENSPTRG00000009646	TSEN54	97	46.904	Pan_troglodytes
ENSKMAG00000006944	tsen54	97	44.961	ENSPANG00000020133	TSEN54	96	46.300	Papio_anubis
ENSKMAG00000006944	tsen54	99	52.847	ENSPKIG00000023018	tsen54	99	53.917	Paramormyrops_kingsleyae
ENSKMAG00000006944	tsen54	81	44.570	ENSPSIG00000012807	TSEN54	100	44.570	Pelodiscus_sinensis
ENSKMAG00000006944	tsen54	94	46.813	ENSPMGG00000019578	tsen54	100	46.813	Periophthalmus_magnuspinnatus
ENSKMAG00000006944	tsen54	97	46.869	ENSPEMG00000014857	Tsen54	97	46.869	Peromyscus_maniculatus_bairdii
ENSKMAG00000006944	tsen54	100	70.677	ENSPFOG00000022740	tsen54	100	70.865	Poecilia_formosa
ENSKMAG00000006944	tsen54	100	70.833	ENSPLAG00000014847	tsen54	100	71.023	Poecilia_latipinna
ENSKMAG00000006944	tsen54	100	70.644	ENSPMEG00000022876	tsen54	100	70.833	Poecilia_mexicana
ENSKMAG00000006944	tsen54	100	70.265	ENSPREG00000013090	tsen54	100	70.455	Poecilia_reticulata
ENSKMAG00000006944	tsen54	71	58.385	ENSPPYG00000008629	TSEN54	99	44.990	Pongo_abelii
ENSKMAG00000006944	tsen54	92	42.159	ENSPCAG00000002093	TSEN54	96	42.770	Procavia_capensis
ENSKMAG00000006944	tsen54	97	45.977	ENSPCOG00000027880	TSEN54	97	46.578	Propithecus_coquereli
ENSKMAG00000006944	tsen54	97	44.821	ENSPVAG00000008446	TSEN54	97	45.455	Pteropus_vampyrus
ENSKMAG00000006944	tsen54	94	69.819	ENSPNYG00000010217	tsen54	100	69.819	Pundamilia_nyererei
ENSKMAG00000006944	tsen54	98	55.598	ENSPNAG00000003770	tsen54	97	55.598	Pygocentrus_nattereri
ENSKMAG00000006944	tsen54	97	45.047	ENSRNOG00000004598	Tsen54	97	45.047	Rattus_norvegicus
ENSKMAG00000006944	tsen54	97	46.272	ENSRBIG00000043040	TSEN54	97	45.966	Rhinopithecus_bieti
ENSKMAG00000006944	tsen54	97	46.272	ENSRROG00000030797	TSEN54	97	45.966	Rhinopithecus_roxellana
ENSKMAG00000006944	tsen54	97	42.442	ENSSBOG00000013543	TSEN54	96	44.466	Saimiri_boliviensis_boliviensis
ENSKMAG00000006944	tsen54	97	44.841	ENSSHAG00000018127	TSEN54	96	44.841	Sarcophilus_harrisii
ENSKMAG00000006944	tsen54	81	53.917	ENSSFOG00015004093	tsen54	99	54.253	Scleropages_formosus
ENSKMAG00000006944	tsen54	97	68.726	ENSSMAG00000012449	tsen54	98	70.077	Scophthalmus_maximus
ENSKMAG00000006944	tsen54	100	71.429	ENSSDUG00000021506	tsen54	100	71.800	Seriola_dumerili
ENSKMAG00000006944	tsen54	100	71.429	ENSSLDG00000016303	tsen54	100	71.800	Seriola_lalandi_dorsalis
ENSKMAG00000006944	tsen54	80	42.956	ENSSPUG00000008988	TSEN54	96	42.956	Sphenodon_punctatus
ENSKMAG00000006944	tsen54	94	71.573	ENSSPAG00000008098	-	100	71.573	Stegastes_partitus
ENSKMAG00000006944	tsen54	81	65.661	ENSSPAG00000008047	tsen54	100	65.661	Stegastes_partitus
ENSKMAG00000006944	tsen54	97	45.611	ENSSSCG00000036852	TSEN54	97	46.857	Sus_scrofa
ENSKMAG00000006944	tsen54	86	44.492	ENSTGUG00000008548	TSEN54	99	44.492	Taeniopygia_guttata
ENSKMAG00000006944	tsen54	100	63.774	ENSTRUG00000004230	tsen54	100	63.774	Takifugu_rubripes
ENSKMAG00000006944	tsen54	97	63.230	ENSTNIG00000011281	tsen54	98	63.495	Tetraodon_nigroviridis
ENSKMAG00000006944	tsen54	86	44.968	ENSTTRG00000015828	TSEN54	99	46.383	Tursiops_truncatus
ENSKMAG00000006944	tsen54	81	43.049	ENSUAMG00000010045	TSEN54	99	43.946	Ursus_americanus
ENSKMAG00000006944	tsen54	83	43.778	ENSUMAG00000008979	TSEN54	99	45.217	Ursus_maritimus
ENSKMAG00000006944	tsen54	96	45.402	ENSVVUG00000011411	TSEN54	97	47.048	Vulpes_vulpes
ENSKMAG00000006944	tsen54	97	44.821	ENSXETG00000012532	tsen54	100	61.667	Xenopus_tropicalis
ENSKMAG00000006944	tsen54	97	61.404	ENSXCOG00000018245	tsen54	100	64.203	Xiphophorus_couchianus
ENSKMAG00000006944	tsen54	100	70.455	ENSXMAG00000018818	tsen54	100	70.644	Xiphophorus_maculatus