EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000007139 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 6585 bases
Position: chrLWHD01000164.1:349295-355879
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000009523	RVT_1	PF00078.27	1.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000009669	-	3561	-	ENSKMAP00000009523	1186 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000007139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000007139's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000007139	-	65	48.934	ENSKMAG00000010001	-	60	48.934
ENSKMAG00000007139	-	68	56.506	ENSKMAG00000006793	-	65	54.167
ENSKMAG00000007139	-	65	49.381	ENSKMAG00000012888	-	65	49.381
ENSKMAG00000007139	-	76	45.911	ENSKMAG00000021870	-	71	46.047
ENSKMAG00000007139	-	72	81.058	ENSKMAG00000011266	-	99	81.058

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000007139	-	62	45.969	ENSAMXG00000040915	-	81	40.000	Astyanax_mexicanus
ENSKMAG00000007139	-	69	46.053	ENSAMXG00000041694	-	96	45.125	Astyanax_mexicanus
ENSKMAG00000007139	-	68	43.889	ENSAMXG00000042699	-	82	43.660	Astyanax_mexicanus
ENSKMAG00000007139	-	69	45.354	ENSDARG00000114395	CU929458.1	61	45.354	Danio_rerio
ENSKMAG00000007139	-	69	44.839	ENSDARG00000111789	BX571665.1	61	44.839	Danio_rerio
ENSKMAG00000007139	-	69	45.344	ENSDARG00000115891	CR533578.1	61	45.344	Danio_rerio
ENSKMAG00000007139	-	65	52.465	ENSORLG00000027396	-	61	52.465	Oryzias_latipes
ENSKMAG00000007139	-	72	45.435	ENSORLG00020019993	-	94	45.540	Oryzias_latipes_hni
ENSKMAG00000007139	-	65	50.241	ENSORLG00015015202	-	74	49.072	Oryzias_latipes_hsok
ENSKMAG00000007139	-	65	48.272	ENSORLG00015020336	-	86	48.272	Oryzias_latipes_hsok