EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000007200 (Gene tree)
Gene ID: 108246891
Gene Symbol: usb1
Alias: zgc:91896
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 3613 bases
Position: chrLWHD01000239.1:338621-342233
Accession: 108246891
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000009586	HVSL	PF09749.9	1.5e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000009734	-	1558	XM_017434655	ENSKMAP00000009586	283 (aa)	XP_017290144	UPI0007F873C4

Gene Model

Click here to download ENSKMAG00000007200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000007200's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000007200	usb1	80	52.423	ENSG00000103005	USB1	100	53.271	Homo_sapiens
ENSKMAG00000007200	usb1	99	71.724	ENSAPOG00000011942	usb1	94	75.379	Acanthochromis_polyacanthus
ENSKMAG00000007200	usb1	80	52.863	ENSAMEG00000017205	USB1	84	52.863	Ailuropoda_melanoleuca
ENSKMAG00000007200	usb1	83	76.371	ENSACIG00000012234	usb1	87	76.695	Amphilophus_citrinellus
ENSKMAG00000007200	usb1	99	70.667	ENSAOCG00000014831	usb1	94	76.692	Amphiprion_ocellaris
ENSKMAG00000007200	usb1	99	70.000	ENSAPEG00000000296	usb1	94	75.940	Amphiprion_percula
ENSKMAG00000007200	usb1	99	69.643	ENSATEG00000009348	usb1	99	69.643	Anabas_testudineus
ENSKMAG00000007200	usb1	78	54.667	ENSAPLG00000002756	USB1	99	54.667	Anas_platyrhynchos
ENSKMAG00000007200	usb1	80	52.632	ENSACAG00000015481	USB1	99	52.632	Anolis_carolinensis
ENSKMAG00000007200	usb1	80	52.423	ENSANAG00000035640	USB1	86	52.423	Aotus_nancymaae
ENSKMAG00000007200	usb1	99	70.819	ENSACLG00000020586	usb1	99	70.819	Astatotilapia_calliptera
ENSKMAG00000007200	usb1	90	58.397	ENSAMXG00000040146	usb1	87	58.397	Astyanax_mexicanus
ENSKMAG00000007200	usb1	99	48.399	ENSBTAG00000015758	USB1	96	48.249	Bos_taurus
ENSKMAG00000007200	usb1	80	53.304	ENSCJAG00000011733	USB1	96	49.416	Callithrix_jacchus
ENSKMAG00000007200	usb1	98	45.161	ENSCAFG00000008556	USB1	60	51.770	Canis_familiaris
ENSKMAG00000007200	usb1	98	47.312	ENSCAFG00020009263	USB1	85	51.770	Canis_lupus_dingo
ENSKMAG00000007200	usb1	99	48.043	ENSCHIG00000024290	USB1	96	47.860	Capra_hircus
ENSKMAG00000007200	usb1	80	51.101	ENSTSYG00000006997	USB1	96	47.471	Carlito_syrichta
ENSKMAG00000007200	usb1	79	43.304	ENSCAPG00000009057	USB1	96	43.304	Cavia_aperea
ENSKMAG00000007200	usb1	99	47.500	ENSCPOG00000014325	USB1	83	53.125	Cavia_porcellus
ENSKMAG00000007200	usb1	80	52.863	ENSCCAG00000022132	USB1	86	52.863	Cebus_capucinus
ENSKMAG00000007200	usb1	80	53.304	ENSCATG00000032174	USB1	96	49.027	Cercocebus_atys
ENSKMAG00000007200	usb1	61	52.023	ENSCLAG00000007363	USB1	87	52.941	Chinchilla_lanigera
ENSKMAG00000007200	usb1	80	52.863	ENSCSAG00000004783	USB1	96	49.027	Chlorocebus_sabaeus
ENSKMAG00000007200	usb1	80	53.982	ENSCPBG00000026943	USB1	81	53.982	Chrysemys_picta_bellii
ENSKMAG00000007200	usb1	81	31.535	ENSCING00000011490	-	89	31.250	Ciona_intestinalis
ENSKMAG00000007200	usb1	80	53.540	ENSCANG00000037135	USB1	86	53.540	Colobus_angolensis_palliatus
ENSKMAG00000007200	usb1	99	47.500	ENSCGRG00001011243	USB1	92	49.012	Cricetulus_griseus_chok1gshd
ENSKMAG00000007200	usb1	99	47.500	ENSCGRG00000013252	USB1	92	49.012	Cricetulus_griseus_crigri
ENSKMAG00000007200	usb1	99	66.904	ENSCSEG00000013881	usb1	86	71.849	Cynoglossus_semilaevis
ENSKMAG00000007200	usb1	79	76.211	ENSCVAG00000009252	usb1	97	76.211	Cyprinodon_variegatus
ENSKMAG00000007200	usb1	83	58.228	ENSDARG00000003841	usb1	85	58.228	Danio_rerio
ENSKMAG00000007200	usb1	99	47.143	ENSDORG00000001888	Usb1	98	47.143	Dipodomys_ordii
ENSKMAG00000007200	usb1	72	42.788	FBgn0037713	CG16790	78	41.463	Drosophila_melanogaster
ENSKMAG00000007200	usb1	99	40.714	ENSETEG00000019682	USB1	85	43.172	Echinops_telfairi
ENSKMAG00000007200	usb1	94	41.481	ENSEBUG00000005889	usb1	89	43.580	Eptatretus_burgeri
ENSKMAG00000007200	usb1	99	47.687	ENSEASG00005005484	USB1	86	51.982	Equus_asinus_asinus
ENSKMAG00000007200	usb1	99	47.687	ENSECAG00000019493	USB1	78	52.212	Equus_caballus
ENSKMAG00000007200	usb1	61	48.555	ENSEEUG00000000154	USB1	58	48.366	Erinaceus_europaeus
ENSKMAG00000007200	usb1	87	62.948	ENSELUG00000010974	usb1	92	62.948	Esox_lucius
ENSKMAG00000007200	usb1	80	51.101	ENSFCAG00000002693	USB1	85	51.101	Felis_catus
ENSKMAG00000007200	usb1	81	53.043	ENSFALG00000006876	USB1	96	48.828	Ficedula_albicollis
ENSKMAG00000007200	usb1	99	46.786	ENSFDAG00000010052	USB1	96	47.860	Fukomys_damarensis
ENSKMAG00000007200	usb1	88	68.898	ENSFHEG00000012334	usb1	92	71.616	Fundulus_heteroclitus
ENSKMAG00000007200	usb1	78	69.369	ENSGMOG00000004228	usb1	99	69.369	Gadus_morhua
ENSKMAG00000007200	usb1	78	54.260	ENSGALG00000035604	USB1	88	54.464	Gallus_gallus
ENSKMAG00000007200	usb1	99	73.684	ENSGAFG00000021890	usb1	94	75.385	Gambusia_affinis
ENSKMAG00000007200	usb1	99	67.143	ENSGACG00000003257	usb1	99	65.398	Gasterosteus_aculeatus
ENSKMAG00000007200	usb1	98	50.896	ENSGAGG00000022572	USB1	93	51.373	Gopherus_agassizii
ENSKMAG00000007200	usb1	80	52.863	ENSGGOG00000017147	USB1	96	49.027	Gorilla_gorilla
ENSKMAG00000007200	usb1	99	71.071	ENSHBUG00000009823	usb1	99	71.071	Haplochromis_burtoni
ENSKMAG00000007200	usb1	98	47.312	ENSHGLG00000016078	USB1	92	48.617	Heterocephalus_glaber_female
ENSKMAG00000007200	usb1	98	47.312	ENSHGLG00100005562	USB1	92	48.617	Heterocephalus_glaber_male
ENSKMAG00000007200	usb1	77	71.101	ENSHCOG00000015633	usb1	86	71.749	Hippocampus_comes
ENSKMAG00000007200	usb1	99	53.472	ENSIPUG00000008601	usb1	91	54.373	Ictalurus_punctatus
ENSKMAG00000007200	usb1	99	47.687	ENSSTOG00000007548	USB1	83	51.982	Ictidomys_tridecemlineatus
ENSKMAG00000007200	usb1	99	48.571	ENSJJAG00000021859	Usb1	85	53.304	Jaculus_jaculus
ENSKMAG00000007200	usb1	82	71.064	ENSLBEG00000008452	usb1	74	71.064	Labrus_bergylta
ENSKMAG00000007200	usb1	86	48.988	ENSLACG00000000105	USB1	78	52.679	Latimeria_chalumnae
ENSKMAG00000007200	usb1	99	51.389	ENSLOCG00000000465	usb1	88	52.344	Lepisosteus_oculatus
ENSKMAG00000007200	usb1	99	37.979	ENSLAFG00000002267	USB1	83	39.574	Loxodonta_africana
ENSKMAG00000007200	usb1	80	53.304	ENSMFAG00000003926	USB1	96	49.027	Macaca_fascicularis
ENSKMAG00000007200	usb1	80	53.304	ENSMMUG00000022669	USB1	96	49.027	Macaca_mulatta
ENSKMAG00000007200	usb1	80	53.304	ENSMNEG00000042487	USB1	96	49.027	Macaca_nemestrina
ENSKMAG00000007200	usb1	80	53.304	ENSMLEG00000028756	USB1	96	49.027	Mandrillus_leucophaeus
ENSKMAG00000007200	usb1	99	69.310	ENSMAMG00000015092	usb1	96	71.429	Mastacembelus_armatus
ENSKMAG00000007200	usb1	99	70.714	ENSMZEG00005010008	usb1	99	70.714	Maylandia_zebra
ENSKMAG00000007200	usb1	99	46.786	ENSMAUG00000007832	Usb1	85	51.982	Mesocricetus_auratus
ENSKMAG00000007200	usb1	80	51.982	ENSMICG00000004900	USB1	86	51.982	Microcebus_murinus
ENSKMAG00000007200	usb1	99	48.214	ENSMOCG00000022647	Usb1	85	53.304	Microtus_ochrogaster
ENSKMAG00000007200	usb1	79	74.554	ENSMMOG00000000490	usb1	88	74.222	Mola_mola
ENSKMAG00000007200	usb1	76	53.456	ENSMODG00000014067	USB1	85	53.304	Monodelphis_domestica
ENSKMAG00000007200	usb1	84	77.311	ENSMALG00000005930	usb1	99	69.204	Monopterus_albus
ENSKMAG00000007200	usb1	99	47.143	MGP_CAROLIEiJ_G0031421	Usb1	99	50.893	Mus_caroli
ENSKMAG00000007200	usb1	99	46.786	ENSMUSG00000031792	Usb1	99	50.893	Mus_musculus
ENSKMAG00000007200	usb1	80	52.423	MGP_PahariEiJ_G0023019	Usb1	100	52.137	Mus_pahari
ENSKMAG00000007200	usb1	99	47.143	MGP_SPRETEiJ_G0032540	Usb1	85	51.982	Mus_spretus
ENSKMAG00000007200	usb1	80	51.982	ENSMPUG00000004684	USB1	81	51.982	Mustela_putorius_furo
ENSKMAG00000007200	usb1	80	52.863	ENSMLUG00000007400	USB1	98	52.863	Myotis_lucifugus
ENSKMAG00000007200	usb1	99	48.929	ENSNGAG00000009703	Usb1	93	50.575	Nannospalax_galili
ENSKMAG00000007200	usb1	99	64.539	ENSNBRG00000008747	usb1	99	73.239	Neolamprologus_brichardi
ENSKMAG00000007200	usb1	71	54.950	ENSNLEG00000003340	USB1	92	50.431	Nomascus_leucogenys
ENSKMAG00000007200	usb1	98	49.462	ENSODEG00000016214	USB1	85	53.982	Octodon_degus
ENSKMAG00000007200	usb1	99	71.429	ENSONIG00000011063	usb1	100	71.071	Oreochromis_niloticus
ENSKMAG00000007200	usb1	79	51.556	ENSOANG00000012118	USB1	94	51.556	Ornithorhynchus_anatinus
ENSKMAG00000007200	usb1	87	77.143	ENSORLG00000012479	usb1	90	77.143	Oryzias_latipes
ENSKMAG00000007200	usb1	89	74.510	ENSORLG00020018671	usb1	94	74.510	Oryzias_latipes_hni
ENSKMAG00000007200	usb1	89	75.686	ENSORLG00015009679	usb1	94	75.686	Oryzias_latipes_hsok
ENSKMAG00000007200	usb1	90	74.803	ENSOMEG00000012930	usb1	99	72.982	Oryzias_melastigma
ENSKMAG00000007200	usb1	80	48.458	ENSOGAG00000003273	USB1	85	48.458	Otolemur_garnettii
ENSKMAG00000007200	usb1	80	51.982	ENSOARG00000001107	USB1	87	51.982	Ovis_aries
ENSKMAG00000007200	usb1	80	52.423	ENSPPAG00000042137	USB1	96	48.638	Pan_paniscus
ENSKMAG00000007200	usb1	89	48.016	ENSPPRG00000024797	USB1	93	47.638	Panthera_pardus
ENSKMAG00000007200	usb1	89	43.478	ENSPTIG00000007506	USB1	93	47.244	Panthera_tigris_altaica
ENSKMAG00000007200	usb1	80	48.899	ENSPTRG00000008172	USB1	100	53.738	Pan_troglodytes
ENSKMAG00000007200	usb1	80	53.304	ENSPANG00000025138	USB1	96	49.027	Papio_anubis
ENSKMAG00000007200	usb1	99	55.776	ENSPKIG00000015109	usb1	99	55.776	Paramormyrops_kingsleyae
ENSKMAG00000007200	usb1	79	42.678	ENSPSIG00000004305	USB1	100	42.678	Pelodiscus_sinensis
ENSKMAG00000007200	usb1	78	68.919	ENSPMGG00000017725	usb1	85	68.919	Periophthalmus_magnuspinnatus
ENSKMAG00000007200	usb1	99	47.143	ENSPEMG00000016183	Usb1	83	51.982	Peromyscus_maniculatus_bairdii
ENSKMAG00000007200	usb1	78	51.556	ENSPMAG00000000462	usb1	95	51.556	Petromyzon_marinus
ENSKMAG00000007200	usb1	99	74.476	ENSPFOG00000011130	usb1	94	76.245	Poecilia_formosa
ENSKMAG00000007200	usb1	99	74.126	ENSPLAG00000009820	usb1	94	75.862	Poecilia_latipinna
ENSKMAG00000007200	usb1	99	74.126	ENSPMEG00000006402	usb1	94	75.862	Poecilia_mexicana
ENSKMAG00000007200	usb1	88	73.228	ENSPREG00000001047	usb1	93	76.419	Poecilia_reticulata
ENSKMAG00000007200	usb1	71	51.724	ENSPPYG00000007401	USB1	96	46.311	Pongo_abelii
ENSKMAG00000007200	usb1	80	51.542	ENSPCOG00000022612	USB1	86	51.542	Propithecus_coquereli
ENSKMAG00000007200	usb1	99	46.071	ENSPVAG00000004613	USB1	86	50.446	Pteropus_vampyrus
ENSKMAG00000007200	usb1	99	70.714	ENSPNYG00000022262	usb1	99	70.714	Pundamilia_nyererei
ENSKMAG00000007200	usb1	79	66.518	ENSPNAG00000011736	usb1	76	66.518	Pygocentrus_nattereri
ENSKMAG00000007200	usb1	99	47.143	ENSRNOG00000013216	Usb1	85	51.982	Rattus_norvegicus
ENSKMAG00000007200	usb1	80	49.339	ENSRBIG00000044466	USB1	100	54.206	Rhinopithecus_bieti
ENSKMAG00000007200	usb1	80	53.304	ENSRROG00000029211	USB1	86	53.304	Rhinopithecus_roxellana
ENSKMAG00000007200	usb1	80	53.304	ENSSBOG00000029362	USB1	86	53.304	Saimiri_boliviensis_boliviensis
ENSKMAG00000007200	usb1	76	51.152	ENSSHAG00000006993	USB1	90	51.542	Sarcophilus_harrisii
ENSKMAG00000007200	usb1	79	63.839	ENSSFOG00015023663	usb1	70	64.126	Scleropages_formosus
ENSKMAG00000007200	usb1	99	66.667	ENSSMAG00000015834	usb1	99	66.667	Scophthalmus_maximus
ENSKMAG00000007200	usb1	79	80.269	ENSSDUG00000002949	usb1	83	80.269	Seriola_dumerili
ENSKMAG00000007200	usb1	84	78.992	ENSSLDG00000014174	usb1	85	78.992	Seriola_lalandi_dorsalis
ENSKMAG00000007200	usb1	75	52.804	ENSSPUG00000006741	USB1	100	52.804	Sphenodon_punctatus
ENSKMAG00000007200	usb1	99	71.088	ENSSPAG00000007484	usb1	85	78.838	Stegastes_partitus
ENSKMAG00000007200	usb1	99	48.571	ENSSSCG00000002807	USB1	88	50.000	Sus_scrofa
ENSKMAG00000007200	usb1	74	54.502	ENSTGUG00000004792	USB1	87	53.153	Taeniopygia_guttata
ENSKMAG00000007200	usb1	99	67.143	ENSTRUG00000021069	usb1	88	72.574	Takifugu_rubripes
ENSKMAG00000007200	usb1	99	57.500	ENSTNIG00000000626	usb1	83	65.919	Tetraodon_nigroviridis
ENSKMAG00000007200	usb1	79	37.054	ENSTBEG00000001507	USB1	97	37.054	Tupaia_belangeri
ENSKMAG00000007200	usb1	80	52.863	ENSUAMG00000016823	USB1	84	52.863	Ursus_americanus
ENSKMAG00000007200	usb1	75	53.271	ENSUMAG00000021369	USB1	100	53.271	Ursus_maritimus
ENSKMAG00000007200	usb1	80	51.770	ENSVVUG00000023700	USB1	87	51.770	Vulpes_vulpes
ENSKMAG00000007200	usb1	76	52.535	ENSXETG00000013795	usb1	89	52.466	Xenopus_tropicalis
ENSKMAG00000007200	usb1	85	79.253	ENSXMAG00000024687	usb1	77	75.479	Xiphophorus_maculatus