EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000007213 (Gene tree)
Gene ID: 108229619
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase ddx6
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 4197 bases
Position: chrLWHD01002696.1:2302-6498
Accession: 108229619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000009646	DEAD	PF00270.29	1.3e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000009793	-	1458	XM_017405286	ENSKMAP00000009646	485 (aa)	XP_017260775	UPI0007F8C980

Gene Model

Click here to download ENSKMAG00000007213's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000007213's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000007213	-	98	80.982	ENSKMAG00000003546	ddx6	100	81.148
ENSKMAG00000007213	-	72	34.078	ENSKMAG00000004909	ddx49	75	34.078
ENSKMAG00000007213	-	66	30.793	ENSKMAG00000005975	ddx18	79	37.419
ENSKMAG00000007213	-	71	30.899	ENSKMAG00000011257	DDX5	71	30.448
ENSKMAG00000007213	-	72	35.989	ENSKMAG00000003496	zgc:193690	76	35.989
ENSKMAG00000007213	-	71	31.180	ENSKMAG00000012930	ddx5	57	31.180
ENSKMAG00000007213	-	76	39.785	ENSKMAG00000004019	eif4a2	90	39.785
ENSKMAG00000007213	-	76	31.250	ENSKMAG00000012633	-	58	30.216
ENSKMAG00000007213	-	69	31.268	ENSKMAG00000022006	ddx55	60	31.268
ENSKMAG00000007213	-	76	38.710	ENSKMAG00000006928	eif4a1b	92	38.710
ENSKMAG00000007213	-	72	32.500	ENSKMAG00000021636	-	54	32.500
ENSKMAG00000007213	-	70	30.303	ENSKMAG00000012439	ddx4	55	30.303
ENSKMAG00000007213	-	77	36.193	ENSKMAG00000010113	eif4a3	86	36.193
ENSKMAG00000007213	-	80	31.724	ENSKMAG00000012060	ddx23	59	31.724
ENSKMAG00000007213	-	72	32.584	ENSKMAG00000016167	ddx43	51	32.584
ENSKMAG00000007213	-	74	35.677	ENSKMAG00000005196	ddx19	84	35.677
ENSKMAG00000007213	-	76	31.000	ENSKMAG00000011081	-	59	31.000
ENSKMAG00000007213	-	80	34.171	ENSKMAG00000019022	ddx20	51	34.171
ENSKMAG00000007213	-	75	30.952	ENSKMAG00000019331	DDX41	60	30.952
ENSKMAG00000007213	-	69	40.678	ENSKMAG00000011340	ddx1	53	40.678
ENSKMAG00000007213	-	81	36.111	ENSKMAG00000011231	DDX39A	90	36.111
ENSKMAG00000007213	-	81	35.338	ENSKMAG00000000831	-	93	35.338

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000007213	-	96	86.780	ENSAPOG00000014829	ddx61	96	86.780	Acanthochromis_polyacanthus
ENSKMAG00000007213	-	76	97.067	ENSAPOG00000023627	-	95	97.067	Acanthochromis_polyacanthus
ENSKMAG00000007213	-	100	88.090	ENSACIG00000018355	-	100	88.090	Amphilophus_citrinellus
ENSKMAG00000007213	-	100	95.501	ENSAOCG00000006269	-	100	95.501	Amphiprion_ocellaris
ENSKMAG00000007213	-	96	87.846	ENSAOCG00000007627	ddx61	96	87.846	Amphiprion_ocellaris
ENSKMAG00000007213	-	100	95.501	ENSAPEG00000021368	-	100	95.501	Amphiprion_percula
ENSKMAG00000007213	-	96	87.846	ENSAPEG00000007293	ddx61	96	87.846	Amphiprion_percula
ENSKMAG00000007213	-	100	95.501	ENSAPEG00000020642	-	100	95.501	Amphiprion_percula
ENSKMAG00000007213	-	96	87.207	ENSATEG00000011302	ddx61	99	86.229	Anabas_testudineus
ENSKMAG00000007213	-	100	93.865	ENSATEG00000005424	-	100	93.865	Anabas_testudineus
ENSKMAG00000007213	-	100	95.483	ENSACLG00000003260	-	100	95.483	Astatotilapia_calliptera
ENSKMAG00000007213	-	99	86.430	ENSACLG00000027620	ddx61	100	86.430	Astatotilapia_calliptera
ENSKMAG00000007213	-	99	88.660	ENSAMXG00000033980	-	98	88.660	Astyanax_mexicanus
ENSKMAG00000007213	-	96	88.034	ENSAMXG00000032542	ddx61	98	86.848	Astyanax_mexicanus
ENSKMAG00000007213	-	100	93.252	ENSCSEG00000009893	-	100	93.252	Cynoglossus_semilaevis
ENSKMAG00000007213	-	100	92.843	ENSCVAG00000011006	-	100	92.843	Cyprinodon_variegatus
ENSKMAG00000007213	-	99	85.744	ENSDARG00000018425	ddx61	99	85.744	Danio_rerio
ENSKMAG00000007213	-	98	88.750	ENSELUG00000020545	ddx61	98	88.750	Esox_lucius
ENSKMAG00000007213	-	98	90.041	ENSELUG00000022538	-	98	90.041	Esox_lucius
ENSKMAG00000007213	-	100	93.252	ENSFHEG00000015487	-	100	93.252	Fundulus_heteroclitus
ENSKMAG00000007213	-	67	87.462	ENSGMOG00000003561	-	100	87.842	Gadus_morhua
ENSKMAG00000007213	-	96	87.579	ENSGMOG00000013762	ddx61	98	87.579	Gadus_morhua
ENSKMAG00000007213	-	100	92.857	ENSGAFG00000015865	-	100	92.857	Gambusia_affinis
ENSKMAG00000007213	-	99	93.568	ENSGACG00000002413	-	99	93.568	Gasterosteus_aculeatus
ENSKMAG00000007213	-	96	85.865	ENSGACG00000003401	ddx61	98	85.865	Gasterosteus_aculeatus
ENSKMAG00000007213	-	99	86.639	ENSHBUG00000017832	ddx61	100	86.639	Haplochromis_burtoni
ENSKMAG00000007213	-	100	95.483	ENSHBUG00000017033	-	100	95.483	Haplochromis_burtoni
ENSKMAG00000007213	-	100	90.798	ENSHCOG00000012238	-	100	90.798	Hippocampus_comes
ENSKMAG00000007213	-	96	84.188	ENSHCOG00000008184	ddx61	96	84.188	Hippocampus_comes
ENSKMAG00000007213	-	96	85.897	ENSIPUG00000012823	DDX6	99	84.760	Ictalurus_punctatus
ENSKMAG00000007213	-	98	87.579	ENSIPUG00000008367	-	99	87.579	Ictalurus_punctatus
ENSKMAG00000007213	-	100	92.540	ENSLBEG00000016890	-	100	92.540	Labrus_bergylta
ENSKMAG00000007213	-	96	87.234	ENSLBEG00000001740	ddx61	97	87.234	Labrus_bergylta
ENSKMAG00000007213	-	96	85.232	ENSLACG00000015214	ddx61	98	85.232	Latimeria_chalumnae
ENSKMAG00000007213	-	96	51.386	ENSLOCG00000004352	ddx61	94	52.026	Lepisosteus_oculatus
ENSKMAG00000007213	-	96	88.273	ENSMAMG00000005321	ddx61	96	88.273	Mastacembelus_armatus
ENSKMAG00000007213	-	100	94.082	ENSMAMG00000005559	-	100	94.082	Mastacembelus_armatus
ENSKMAG00000007213	-	100	95.483	ENSMZEG00005026268	-	100	95.483	Maylandia_zebra
ENSKMAG00000007213	-	99	86.639	ENSMZEG00005003556	ddx61	100	86.639	Maylandia_zebra
ENSKMAG00000007213	-	100	83.845	ENSMMOG00000013694	-	100	83.845	Mola_mola
ENSKMAG00000007213	-	73	76.771	ENSMMOG00000008825	-	92	76.771	Mola_mola
ENSKMAG00000007213	-	96	86.354	ENSMMOG00000007415	ddx61	97	86.354	Mola_mola
ENSKMAG00000007213	-	98	75.574	ENSMALG00000013776	ddx61	96	75.574	Monopterus_albus
ENSKMAG00000007213	-	100	93.661	ENSMALG00000013817	-	100	93.661	Monopterus_albus
ENSKMAG00000007213	-	100	88.501	ENSNBRG00000015075	-	100	88.501	Neolamprologus_brichardi
ENSKMAG00000007213	-	96	80.171	ENSNBRG00000015800	ddx61	98	80.171	Neolamprologus_brichardi
ENSKMAG00000007213	-	100	95.277	ENSONIG00000013748	-	100	95.277	Oreochromis_niloticus
ENSKMAG00000007213	-	99	85.744	ENSONIG00000011418	ddx61	100	85.744	Oreochromis_niloticus
ENSKMAG00000007213	-	100	93.827	ENSORLG00000009178	-	100	93.827	Oryzias_latipes
ENSKMAG00000007213	-	100	93.827	ENSORLG00020015515	-	100	93.827	Oryzias_latipes_hni
ENSKMAG00000007213	-	100	93.827	ENSORLG00015006764	-	100	93.827	Oryzias_latipes_hsok
ENSKMAG00000007213	-	98	85.624	ENSOMEG00000022326	-	99	85.624	Oryzias_melastigma
ENSKMAG00000007213	-	97	90.909	ENSPKIG00000024264	ddx61	99	90.062	Paramormyrops_kingsleyae
ENSKMAG00000007213	-	100	83.745	ENSPMGG00000013355	-	100	83.745	Periophthalmus_magnuspinnatus
ENSKMAG00000007213	-	100	93.456	ENSPFOG00000005750	-	100	93.456	Poecilia_formosa
ENSKMAG00000007213	-	100	93.456	ENSPLAG00000000403	-	100	93.456	Poecilia_latipinna
ENSKMAG00000007213	-	100	93.840	ENSPMEG00000023737	-	100	93.840	Poecilia_mexicana
ENSKMAG00000007213	-	99	80.426	ENSPNYG00000015045	ddx61	100	80.426	Pundamilia_nyererei
ENSKMAG00000007213	-	100	95.483	ENSPNYG00000003986	-	100	95.483	Pundamilia_nyererei
ENSKMAG00000007213	-	99	89.234	ENSPNAG00000008742	-	98	89.234	Pygocentrus_nattereri
ENSKMAG00000007213	-	98	87.110	ENSPNAG00000024072	ddx61	99	87.110	Pygocentrus_nattereri
ENSKMAG00000007213	-	96	89.619	ENSSFOG00015021404	ddx61	97	88.773	Scleropages_formosus
ENSKMAG00000007213	-	100	93.456	ENSSMAG00000001793	-	100	93.456	Scophthalmus_maximus
ENSKMAG00000007213	-	96	86.994	ENSSMAG00000006591	ddx61	96	86.994	Scophthalmus_maximus
ENSKMAG00000007213	-	100	94.898	ENSSDUG00000007530	-	100	94.898	Seriola_dumerili
ENSKMAG00000007213	-	96	87.633	ENSSDUG00000009713	ddx61	96	87.633	Seriola_dumerili
ENSKMAG00000007213	-	100	94.898	ENSSLDG00000007608	-	100	94.898	Seriola_lalandi_dorsalis
ENSKMAG00000007213	-	96	87.633	ENSSLDG00000000132	ddx61	96	87.633	Seriola_lalandi_dorsalis
ENSKMAG00000007213	-	100	95.910	ENSSPAG00000013878	-	100	95.910	Stegastes_partitus
ENSKMAG00000007213	-	96	88.034	ENSSPAG00000001578	ddx61	96	88.034	Stegastes_partitus
ENSKMAG00000007213	-	99	90.779	ENSTRUG00000012432	-	99	90.779	Takifugu_rubripes
ENSKMAG00000007213	-	99	91.441	ENSTNIG00000003560	-	100	91.441	Tetraodon_nigroviridis
ENSKMAG00000007213	-	100	83.673	ENSXCOG00000001406	-	100	83.673	Xiphophorus_couchianus
ENSKMAG00000007213	-	100	93.061	ENSXMAG00000016090	-	100	93.061	Xiphophorus_maculatus