EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000007267 (Gene tree)
Gene ID: -
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: RAB42%2C member RAS oncogene family a
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 4729 bases
Position: chrLWHD01000164.1:672605-677333
Accession: ZDB-GENE-040426-1983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000009675	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000009824	-	1335	-	ENSKMAP00000009675	218 (aa)	-	UPI0007F91B29

Gene Model

Click here to download ENSKMAG00000007267's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000007267's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000007267	rab42a	75	31.928	ENSKMAG00000003080	si:cabz01085950.1	82	31.928
ENSKMAG00000007267	rab42a	72	40.127	ENSKMAG00000002545	-	73	40.127
ENSKMAG00000007267	rab42a	75	43.293	ENSKMAG00000006854	rab35b	80	43.293
ENSKMAG00000007267	rab42a	99	39.070	ENSKMAG00000004945	rab25a	84	40.223
ENSKMAG00000007267	rab42a	75	35.976	ENSKMAG00000005111	rab5aa	75	35.976
ENSKMAG00000007267	rab42a	85	42.473	ENSKMAG00000006170	-	84	42.473
ENSKMAG00000007267	rab42a	97	33.649	ENSKMAG00000015507	rab6ba	75	38.854
ENSKMAG00000007267	rab42a	76	43.030	ENSKMAG00000007364	rab18b	80	43.030
ENSKMAG00000007267	rab42a	72	39.623	ENSKMAG00000021039	si:dkey-13a21.4	66	39.623
ENSKMAG00000007267	rab42a	72	40.373	ENSKMAG00000017662	rab9a	79	40.373
ENSKMAG00000007267	rab42a	80	40.805	ENSKMAG00000001908	rab13	91	40.805
ENSKMAG00000007267	rab42a	74	34.940	ENSKMAG00000020013	-	80	34.940
ENSKMAG00000007267	rab42a	75	40.719	ENSKMAG00000003646	-	83	40.719
ENSKMAG00000007267	rab42a	73	34.161	ENSKMAG00000003938	kras	98	32.461
ENSKMAG00000007267	rab42a	76	35.882	ENSKMAG00000017150	-	76	35.882
ENSKMAG00000007267	rab42a	69	44.737	ENSKMAG00000003105	rab33ba	64	44.737
ENSKMAG00000007267	rab42a	98	38.318	ENSKMAG00000011301	-	97	38.318
ENSKMAG00000007267	rab42a	89	36.410	ENSKMAG00000020250	rab4a	91	36.410
ENSKMAG00000007267	rab42a	83	42.778	ENSKMAG00000015488	rab25b	86	42.778
ENSKMAG00000007267	rab42a	96	30.806	ENSKMAG00000019647	rab34a	77	30.806
ENSKMAG00000007267	rab42a	99	41.150	ENSKMAG00000012657	-	96	41.150
ENSKMAG00000007267	rab42a	79	42.197	ENSKMAG00000009856	zgc:171927	80	42.197
ENSKMAG00000007267	rab42a	79	43.023	ENSKMAG00000014038	-	81	43.023
ENSKMAG00000007267	rab42a	94	39.130	ENSKMAG00000011905	rab11a	86	41.935
ENSKMAG00000007267	rab42a	72	34.177	ENSKMAG00000018270	rab23	70	33.529
ENSKMAG00000007267	rab42a	98	38.318	ENSKMAG00000017487	rab14	97	38.318
ENSKMAG00000007267	rab42a	85	42.473	ENSKMAG00000009033	rab11bb	84	42.473
ENSKMAG00000007267	rab42a	77	33.929	ENSKMAG00000020448	rheb	89	33.929
ENSKMAG00000007267	rab42a	74	34.337	ENSKMAG00000006812	RAB7A	79	34.337
ENSKMAG00000007267	rab42a	84	40.217	ENSKMAG00000006810	rab1ba	91	40.217
ENSKMAG00000007267	rab42a	56	32.000	ENSKMAG00000004435	arl3l2	62	32.000
ENSKMAG00000007267	rab42a	73	44.375	ENSKMAG00000004439	rab30	78	44.375
ENSKMAG00000007267	rab42a	78	33.529	ENSKMAG00000020733	rras	85	33.529
ENSKMAG00000007267	rab42a	75	37.725	ENSKMAG00000019964	rab9b	82	37.725
ENSKMAG00000007267	rab42a	82	42.135	ENSKMAG00000017357	rab1ab	87	42.135
ENSKMAG00000007267	rab42a	75	34.756	ENSKMAG00000014705	rab22a	84	34.756
ENSKMAG00000007267	rab42a	96	36.190	ENSKMAG00000001191	RAB15	75	40.625
ENSKMAG00000007267	rab42a	97	34.597	ENSKMAG00000011278	rab6bb	83	36.905
ENSKMAG00000007267	rab42a	78	42.442	ENSKMAG00000020056	rab12	77	41.398
ENSKMAG00000007267	rab42a	98	38.605	ENSKMAG00000015516	rab11al	81	43.750
ENSKMAG00000007267	rab42a	78	33.526	ENSKMAG00000019341	rab34b	68	33.526
ENSKMAG00000007267	rab42a	67	43.243	ENSKMAG00000002862	zgc:101559	63	43.243
ENSKMAG00000007267	rab42a	99	55.963	ENSKMAG00000012778	si:dkey-34d22.5	98	55.963
ENSKMAG00000007267	rab42a	70	40.523	ENSKMAG00000013146	-	79	40.523
ENSKMAG00000007267	rab42a	100	54.587	ENSKMAG00000008625	RAB39B	93	57.789
ENSKMAG00000007267	rab42a	96	37.850	ENSKMAG00000020392	rab15	96	38.095
ENSKMAG00000007267	rab42a	72	40.625	ENSKMAG00000006593	rab33a	74	40.625
ENSKMAG00000007267	rab42a	77	32.335	ENSKMAG00000019397	rhebl1	88	32.335
ENSKMAG00000007267	rab42a	94	32.547	ENSKMAG00000012723	rabl2	68	33.544
ENSKMAG00000007267	rab42a	99	37.327	ENSKMAG00000018973	-	92	37.327
ENSKMAG00000007267	rab42a	69	38.158	ENSKMAG00000017893	mras	79	37.349
ENSKMAG00000007267	rab42a	75	35.976	ENSKMAG00000017417	-	74	35.976
ENSKMAG00000007267	rab42a	69	35.099	ENSKMAG00000001922	Ha-ras	85	34.146
ENSKMAG00000007267	rab42a	67	44.737	ENSKMAG00000020034	-	51	44.737
ENSKMAG00000007267	rab42a	75	37.195	ENSKMAG00000020038	rab5c	74	37.195
ENSKMAG00000007267	rab42a	85	43.011	ENSKMAG00000006082	-	84	43.011
ENSKMAG00000007267	rab42a	80	42.286	ENSKMAG00000003494	si:dkey-16l2.16	82	42.286
ENSKMAG00000007267	rab42a	86	47.340	ENSKMAG00000009799	rab2a	88	47.340

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000007267	rab42a	100	96.330	ENSAPOG00000009188	rab42a	100	96.330	Acanthochromis_polyacanthus
ENSKMAG00000007267	rab42a	100	96.330	ENSACIG00000003102	rab42a	100	96.330	Amphilophus_citrinellus
ENSKMAG00000007267	rab42a	100	95.872	ENSAOCG00000012921	rab42a	83	95.872	Amphiprion_ocellaris
ENSKMAG00000007267	rab42a	100	95.872	ENSAPEG00000007713	rab42a	83	95.872	Amphiprion_percula
ENSKMAG00000007267	rab42a	100	94.037	ENSATEG00000009052	rab42a	100	94.037	Anabas_testudineus
ENSKMAG00000007267	rab42a	100	94.495	ENSACLG00000007514	rab42a	100	94.495	Astatotilapia_calliptera
ENSKMAG00000007267	rab42a	100	89.908	ENSAMXG00000032729	rab42a	100	88.991	Astyanax_mexicanus
ENSKMAG00000007267	rab42a	100	91.743	ENSCSEG00000010582	rab42a	100	91.743	Cynoglossus_semilaevis
ENSKMAG00000007267	rab42a	90	50.254	ENSDARG00000102580	CU571310.1	93	50.254	Danio_rerio
ENSKMAG00000007267	rab42a	100	90.367	ENSDARG00000034215	rab42a	100	89.450	Danio_rerio
ENSKMAG00000007267	rab42a	100	88.991	ENSELUG00000010345	rab42a	100	88.991	Esox_lucius
ENSKMAG00000007267	rab42a	100	97.248	ENSFHEG00000013106	rab42a	100	97.248	Fundulus_heteroclitus
ENSKMAG00000007267	rab42a	100	96.330	ENSGAFG00000002141	rab42a	100	96.330	Gambusia_affinis
ENSKMAG00000007267	rab42a	100	94.495	ENSHBUG00000015126	rab42a	82	94.495	Haplochromis_burtoni
ENSKMAG00000007267	rab42a	100	87.615	ENSIPUG00000011376	rab42a	100	86.697	Ictalurus_punctatus
ENSKMAG00000007267	rab42a	100	95.413	ENSLBEG00000001193	rab42a	100	95.413	Labrus_bergylta
ENSKMAG00000007267	rab42a	100	65.596	ENSLACG00000012755	-	100	65.138	Latimeria_chalumnae
ENSKMAG00000007267	rab42a	100	50.228	ENSLOCG00000015825	-	99	50.228	Lepisosteus_oculatus
ENSKMAG00000007267	rab42a	100	83.028	ENSLOCG00000003453	rab42a	100	82.192	Lepisosteus_oculatus
ENSKMAG00000007267	rab42a	100	95.872	ENSMAMG00000002296	rab42a	100	95.872	Mastacembelus_armatus
ENSKMAG00000007267	rab42a	100	94.495	ENSMZEG00005012460	rab42a	82	94.495	Maylandia_zebra
ENSKMAG00000007267	rab42a	100	92.661	ENSMMOG00000014358	rab42a	100	92.661	Mola_mola
ENSKMAG00000007267	rab42a	100	94.954	ENSNBRG00000021487	rab42a	82	94.954	Neolamprologus_brichardi
ENSKMAG00000007267	rab42a	100	95.413	ENSORLG00000022335	rab42a	100	95.413	Oryzias_latipes
ENSKMAG00000007267	rab42a	100	95.413	ENSORLG00020013895	rab42a	100	95.413	Oryzias_latipes_hni
ENSKMAG00000007267	rab42a	100	95.413	ENSORLG00015004273	rab42a	100	95.413	Oryzias_latipes_hsok
ENSKMAG00000007267	rab42a	100	95.413	ENSOMEG00000020418	rab42a	100	95.413	Oryzias_melastigma
ENSKMAG00000007267	rab42a	99	46.083	ENSPKIG00000015234	-	93	48.969	Paramormyrops_kingsleyae
ENSKMAG00000007267	rab42a	100	77.982	ENSPKIG00000021215	-	100	77.523	Paramormyrops_kingsleyae
ENSKMAG00000007267	rab42a	90	96.447	ENSPMGG00000024112	rab42a	90	96.447	Periophthalmus_magnuspinnatus
ENSKMAG00000007267	rab42a	100	95.872	ENSPFOG00000004838	rab42a	82	95.872	Poecilia_formosa
ENSKMAG00000007267	rab42a	100	95.872	ENSPLAG00000005628	rab42a	100	95.872	Poecilia_latipinna
ENSKMAG00000007267	rab42a	100	95.872	ENSPMEG00000019497	rab42a	100	95.872	Poecilia_mexicana
ENSKMAG00000007267	rab42a	100	96.330	ENSPREG00000013962	rab42a	100	96.330	Poecilia_reticulata
ENSKMAG00000007267	rab42a	100	94.495	ENSPNYG00000010325	rab42a	82	94.495	Pundamilia_nyererei
ENSKMAG00000007267	rab42a	100	89.450	ENSPNAG00000016567	rab42a	100	88.532	Pygocentrus_nattereri
ENSKMAG00000007267	rab42a	100	47.032	ENSSFOG00015016000	-	97	46.575	Scleropages_formosus
ENSKMAG00000007267	rab42a	100	85.780	ENSSFOG00015020732	rab42a	100	85.321	Scleropages_formosus
ENSKMAG00000007267	rab42a	100	93.119	ENSSMAG00000020311	rab42a	100	93.119	Scophthalmus_maximus
ENSKMAG00000007267	rab42a	100	95.413	ENSSDUG00000011851	rab42a	100	95.413	Seriola_dumerili
ENSKMAG00000007267	rab42a	100	95.413	ENSSLDG00000020354	rab42a	100	95.413	Seriola_lalandi_dorsalis
ENSKMAG00000007267	rab42a	100	96.789	ENSSPAG00000016167	rab42a	100	96.789	Stegastes_partitus
ENSKMAG00000007267	rab42a	100	94.495	ENSTRUG00000010224	rab42a	100	94.495	Takifugu_rubripes
ENSKMAG00000007267	rab42a	100	96.789	ENSXCOG00000003428	rab42a	100	96.789	Xiphophorus_couchianus
ENSKMAG00000007267	rab42a	100	96.789	ENSXMAG00000028376	rab42a	100	96.789	Xiphophorus_maculatus