EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000007704 (Gene tree)
Gene ID: -
Gene Symbol: lsm12b
Alias: lsm12|wu:fe01f11|zgc:66039
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 9412 bases
Position: chrLWHD01000005.1:1365335-1374746
Accession: 108249469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000010263	AD	PF09793.9	8.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000010425	-	891	XM_017438877	ENSKMAP00000010263	296 (aa)	XP_017294366	-

Gene Model

Click here to download ENSKMAG00000007704's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000007704's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000007704	lsm12b	57	86.310	ENSG00000161654	LSM12	86	86.310	Homo_sapiens
ENSKMAG00000007704	lsm12b	56	98.204	ENSAPOG00000007907	lsm12b	85	98.204	Acanthochromis_polyacanthus
ENSKMAG00000007704	lsm12b	57	84.211	ENSAMEG00000018321	LSM12	86	84.211	Ailuropoda_melanoleuca
ENSKMAG00000007704	lsm12b	56	95.210	ENSACIG00000008538	lsm12b	85	95.210	Amphilophus_citrinellus
ENSKMAG00000007704	lsm12b	56	97.605	ENSAOCG00000021847	lsm12b	75	97.605	Amphiprion_ocellaris
ENSKMAG00000007704	lsm12b	56	97.605	ENSAPEG00000002252	lsm12b	90	96.471	Amphiprion_percula
ENSKMAG00000007704	lsm12b	56	96.407	ENSATEG00000005705	lsm12b	85	96.407	Anabas_testudineus
ENSKMAG00000007704	lsm12b	56	85.030	ENSACAG00000004618	LSM12	85	85.030	Anolis_carolinensis
ENSKMAG00000007704	lsm12b	57	86.310	ENSANAG00000029011	LSM12	86	86.310	Aotus_nancymaae
ENSKMAG00000007704	lsm12b	56	95.808	ENSACLG00000026332	lsm12b	85	95.808	Astatotilapia_calliptera
ENSKMAG00000007704	lsm12b	56	84.431	ENSAMXG00000036117	lsm12a	78	84.431	Astyanax_mexicanus
ENSKMAG00000007704	lsm12b	56	94.611	ENSAMXG00000032952	lsm12b	85	94.611	Astyanax_mexicanus
ENSKMAG00000007704	lsm12b	57	86.310	ENSBTAG00000016252	LSM12	86	86.310	Bos_taurus
ENSKMAG00000007704	lsm12b	57	86.310	ENSCJAG00000048480	LSM12	86	86.310	Callithrix_jacchus
ENSKMAG00000007704	lsm12b	57	86.310	ENSCAFG00000014379	LSM12	78	86.310	Canis_familiaris
ENSKMAG00000007704	lsm12b	57	86.310	ENSCAFG00020012173	LSM12	86	86.310	Canis_lupus_dingo
ENSKMAG00000007704	lsm12b	57	86.310	ENSCHIG00000018175	LSM12	86	86.310	Capra_hircus
ENSKMAG00000007704	lsm12b	57	86.310	ENSTSYG00000036361	LSM12	86	86.310	Carlito_syrichta
ENSKMAG00000007704	lsm12b	59	83.523	ENSCPOG00000012860	LSM12	89	83.523	Cavia_porcellus
ENSKMAG00000007704	lsm12b	57	86.310	ENSCCAG00000032905	LSM12	86	86.310	Cebus_capucinus
ENSKMAG00000007704	lsm12b	65	79.581	ENSCATG00000030577	-	86	86.310	Cercocebus_atys
ENSKMAG00000007704	lsm12b	59	84.091	ENSCLAG00000015759	LSM12	89	84.091	Chinchilla_lanigera
ENSKMAG00000007704	lsm12b	57	86.310	ENSCSAG00000003486	LSM12	86	86.310	Chlorocebus_sabaeus
ENSKMAG00000007704	lsm12b	65	76.020	ENSCPBG00000027105	LSM12	99	76.020	Chrysemys_picta_bellii
ENSKMAG00000007704	lsm12b	57	86.310	ENSCANG00000043328	LSM12	86	86.310	Colobus_angolensis_palliatus
ENSKMAG00000007704	lsm12b	57	86.310	ENSCGRG00001002094	Lsm12	86	86.310	Cricetulus_griseus_chok1gshd
ENSKMAG00000007704	lsm12b	52	74.510	ENSCGRG00000004316	Lsm12	85	74.510	Cricetulus_griseus_crigri
ENSKMAG00000007704	lsm12b	56	96.407	ENSCSEG00000008434	lsm12b	85	96.407	Cynoglossus_semilaevis
ENSKMAG00000007704	lsm12b	56	97.605	ENSCVAG00000008755	lsm12b	85	97.605	Cyprinodon_variegatus
ENSKMAG00000007704	lsm12b	56	89.222	ENSDARG00000028848	lsm12a	85	89.222	Danio_rerio
ENSKMAG00000007704	lsm12b	56	94.611	ENSDARG00000109510	lsm12b	85	94.611	Danio_rerio
ENSKMAG00000007704	lsm12b	57	86.310	ENSDNOG00000002418	LSM12	78	86.310	Dasypus_novemcinctus
ENSKMAG00000007704	lsm12b	57	86.310	ENSDORG00000016381	Lsm12	86	86.310	Dipodomys_ordii
ENSKMAG00000007704	lsm12b	53	33.951	FBgn0030364	Lsm12	84	32.609	Drosophila_melanogaster
ENSKMAG00000007704	lsm12b	57	85.714	ENSETEG00000008374	LSM12	86	85.714	Echinops_telfairi
ENSKMAG00000007704	lsm12b	57	66.864	ENSEBUG00000016299	lsm12a	93	66.864	Eptatretus_burgeri
ENSKMAG00000007704	lsm12b	57	86.310	ENSEASG00005010155	LSM12	86	86.310	Equus_asinus_asinus
ENSKMAG00000007704	lsm12b	57	86.310	ENSECAG00000009071	LSM12	86	86.310	Equus_caballus
ENSKMAG00000007704	lsm12b	56	92.814	ENSELUG00000000256	-	85	92.814	Esox_lucius
ENSKMAG00000007704	lsm12b	65	82.323	ENSELUG00000015538	lsm12b	100	77.778	Esox_lucius
ENSKMAG00000007704	lsm12b	57	86.310	ENSFCAG00000037021	LSM12	86	86.310	Felis_catus
ENSKMAG00000007704	lsm12b	51	71.154	ENSFDAG00000008954	LSM12	90	71.154	Fukomys_damarensis
ENSKMAG00000007704	lsm12b	56	96.407	ENSFHEG00000019913	lsm12b	85	96.407	Fundulus_heteroclitus
ENSKMAG00000007704	lsm12b	56	97.006	ENSGAFG00000011829	lsm12b	85	97.006	Gambusia_affinis
ENSKMAG00000007704	lsm12b	65	76.020	ENSGAGG00000021965	LSM12	99	76.020	Gopherus_agassizii
ENSKMAG00000007704	lsm12b	57	86.310	ENSGGOG00000010589	-	86	86.310	Gorilla_gorilla
ENSKMAG00000007704	lsm12b	57	95.238	ENSHBUG00000007667	lsm12b	74	95.238	Haplochromis_burtoni
ENSKMAG00000007704	lsm12b	57	86.310	ENSHGLG00000011411	LSM12	86	86.310	Heterocephalus_glaber_female
ENSKMAG00000007704	lsm12b	56	94.012	ENSHCOG00000002094	lsm12b	85	94.012	Hippocampus_comes
ENSKMAG00000007704	lsm12b	56	94.611	ENSIPUG00000014800	lsm12	85	94.611	Ictalurus_punctatus
ENSKMAG00000007704	lsm12b	56	85.629	ENSIPUG00000008936	lsm12a	86	85.629	Ictalurus_punctatus
ENSKMAG00000007704	lsm12b	57	86.310	ENSSTOG00000007403	LSM12	86	86.310	Ictidomys_tridecemlineatus
ENSKMAG00000007704	lsm12b	57	85.714	ENSJJAG00000004364	-	86	85.714	Jaculus_jaculus
ENSKMAG00000007704	lsm12b	54	75.926	ENSJJAG00000011793	-	85	75.926	Jaculus_jaculus
ENSKMAG00000007704	lsm12b	53	73.750	ENSJJAG00000014652	-	96	73.750	Jaculus_jaculus
ENSKMAG00000007704	lsm12b	56	97.006	ENSLBEG00000027999	lsm12b	85	97.006	Labrus_bergylta
ENSKMAG00000007704	lsm12b	56	88.623	ENSLACG00000015981	LSM12	85	88.623	Latimeria_chalumnae
ENSKMAG00000007704	lsm12b	56	92.216	ENSLOCG00000013079	lsm12b	85	92.216	Lepisosteus_oculatus
ENSKMAG00000007704	lsm12b	57	86.310	ENSLAFG00000005202	LSM12	86	86.310	Loxodonta_africana
ENSKMAG00000007704	lsm12b	65	79.581	ENSMFAG00000031376	LSM12	86	86.310	Macaca_fascicularis
ENSKMAG00000007704	lsm12b	65	79.581	ENSMMUG00000006804	LSM12	86	86.310	Macaca_mulatta
ENSKMAG00000007704	lsm12b	65	79.581	ENSMNEG00000030594	-	86	86.310	Macaca_nemestrina
ENSKMAG00000007704	lsm12b	65	79.581	ENSMLEG00000039934	LSM12	86	86.310	Mandrillus_leucophaeus
ENSKMAG00000007704	lsm12b	56	97.006	ENSMAMG00000004279	lsm12b	85	97.006	Mastacembelus_armatus
ENSKMAG00000007704	lsm12b	56	95.808	ENSMZEG00005005754	lsm12b	85	95.808	Maylandia_zebra
ENSKMAG00000007704	lsm12b	57	86.310	ENSMICG00000037219	LSM12	86	86.310	Microcebus_murinus
ENSKMAG00000007704	lsm12b	57	86.310	ENSMOCG00000019878	-	86	86.310	Microtus_ochrogaster
ENSKMAG00000007704	lsm12b	59	70.857	ENSMOCG00000017015	-	75	70.857	Microtus_ochrogaster
ENSKMAG00000007704	lsm12b	56	97.006	ENSMMOG00000020848	lsm12b	85	97.006	Mola_mola
ENSKMAG00000007704	lsm12b	56	97.006	ENSMALG00000007578	lsm12b	85	97.006	Monopterus_albus
ENSKMAG00000007704	lsm12b	57	86.310	MGP_CAROLIEiJ_G0017241	Lsm12	86	86.310	Mus_caroli
ENSKMAG00000007704	lsm12b	57	86.310	ENSMUSG00000020922	Lsm12	86	86.310	Mus_musculus
ENSKMAG00000007704	lsm12b	57	78.378	MGP_PahariEiJ_G0018371	Lsm12	87	78.378	Mus_pahari
ENSKMAG00000007704	lsm12b	57	85.714	MGP_SPRETEiJ_G0018084	Lsm12	86	85.714	Mus_spretus
ENSKMAG00000007704	lsm12b	57	86.905	ENSMLUG00000006391	LSM12	86	86.905	Myotis_lucifugus
ENSKMAG00000007704	lsm12b	56	62.644	ENSNGAG00000015429	-	90	62.644	Nannospalax_galili
ENSKMAG00000007704	lsm12b	57	86.310	ENSNGAG00000001870	Lsm12	86	86.310	Nannospalax_galili
ENSKMAG00000007704	lsm12b	56	95.808	ENSNBRG00000006266	lsm12b	85	95.808	Neolamprologus_brichardi
ENSKMAG00000007704	lsm12b	57	86.310	ENSNLEG00000005580	-	86	86.310	Nomascus_leucogenys
ENSKMAG00000007704	lsm12b	56	85.542	ENSMEUG00000007501	-	100	85.542	Notamacropus_eugenii
ENSKMAG00000007704	lsm12b	57	86.310	ENSOPRG00000008552	LSM12	86	86.310	Ochotona_princeps
ENSKMAG00000007704	lsm12b	58	83.815	ENSODEG00000017998	-	88	83.815	Octodon_degus
ENSKMAG00000007704	lsm12b	56	79.518	ENSODEG00000007886	-	62	79.518	Octodon_degus
ENSKMAG00000007704	lsm12b	56	95.808	ENSONIG00000007933	lsm12b	85	95.808	Oreochromis_niloticus
ENSKMAG00000007704	lsm12b	56	81.437	ENSOCUG00000027889	-	86	81.437	Oryctolagus_cuniculus
ENSKMAG00000007704	lsm12b	57	84.211	ENSOCUG00000008566	-	86	84.211	Oryctolagus_cuniculus
ENSKMAG00000007704	lsm12b	56	80.240	ENSOCUG00000024823	-	86	80.240	Oryctolagus_cuniculus
ENSKMAG00000007704	lsm12b	56	81.437	ENSOCUG00000021254	-	86	81.437	Oryctolagus_cuniculus
ENSKMAG00000007704	lsm12b	56	97.006	ENSORLG00000011310	lsm12b	85	97.006	Oryzias_latipes
ENSKMAG00000007704	lsm12b	56	97.006	ENSORLG00020002060	lsm12b	78	97.006	Oryzias_latipes_hni
ENSKMAG00000007704	lsm12b	56	97.006	ENSORLG00015001647	lsm12b	78	97.006	Oryzias_latipes_hsok
ENSKMAG00000007704	lsm12b	56	97.006	ENSOMEG00000006184	lsm12b	78	97.006	Oryzias_melastigma
ENSKMAG00000007704	lsm12b	57	86.310	ENSOGAG00000010489	LSM12	86	86.310	Otolemur_garnettii
ENSKMAG00000007704	lsm12b	57	82.759	ENSOARG00000006589	LSM12	86	82.759	Ovis_aries
ENSKMAG00000007704	lsm12b	71	62.445	ENSPPAG00000034974	-	99	62.445	Pan_paniscus
ENSKMAG00000007704	lsm12b	57	86.310	ENSPPRG00000023420	LSM12	86	86.310	Panthera_pardus
ENSKMAG00000007704	lsm12b	57	86.310	ENSPTRG00000009261	LSM12	86	86.310	Pan_troglodytes
ENSKMAG00000007704	lsm12b	65	79.581	ENSPANG00000021315	-	86	86.310	Papio_anubis
ENSKMAG00000007704	lsm12b	56	86.228	ENSPKIG00000017932	-	85	86.228	Paramormyrops_kingsleyae
ENSKMAG00000007704	lsm12b	56	94.012	ENSPKIG00000021058	lsm12b	91	93.976	Paramormyrops_kingsleyae
ENSKMAG00000007704	lsm12b	56	96.407	ENSPMGG00000021344	lsm12b	85	96.407	Periophthalmus_magnuspinnatus
ENSKMAG00000007704	lsm12b	57	86.310	ENSPEMG00000012199	Lsm12	86	86.310	Peromyscus_maniculatus_bairdii
ENSKMAG00000007704	lsm12b	56	67.066	ENSPMAG00000005461	lsm12a	95	67.066	Petromyzon_marinus
ENSKMAG00000007704	lsm12b	56	85.629	ENSPCIG00000020244	LSM12	85	85.629	Phascolarctos_cinereus
ENSKMAG00000007704	lsm12b	56	95.808	ENSPFOG00000015930	lsm12b	85	95.808	Poecilia_formosa
ENSKMAG00000007704	lsm12b	56	95.808	ENSPLAG00000021089	lsm12b	85	95.808	Poecilia_latipinna
ENSKMAG00000007704	lsm12b	56	95.808	ENSPMEG00000012961	lsm12b	85	95.808	Poecilia_mexicana
ENSKMAG00000007704	lsm12b	57	86.310	ENSPPYG00000008344	LSM12	86	86.310	Pongo_abelii
ENSKMAG00000007704	lsm12b	54	86.164	ENSPCAG00000008790	LSM12	100	86.164	Procavia_capensis
ENSKMAG00000007704	lsm12b	57	86.310	ENSPCOG00000027951	LSM12	86	86.310	Propithecus_coquereli
ENSKMAG00000007704	lsm12b	56	86.228	ENSPVAG00000013706	LSM12	85	86.228	Pteropus_vampyrus
ENSKMAG00000007704	lsm12b	56	95.808	ENSPNYG00000003386	lsm12b	85	95.808	Pundamilia_nyererei
ENSKMAG00000007704	lsm12b	57	93.452	ENSPNAG00000004186	lsm12b	85	94.012	Pygocentrus_nattereri
ENSKMAG00000007704	lsm12b	56	84.431	ENSPNAG00000018435	lsm12a	85	84.431	Pygocentrus_nattereri
ENSKMAG00000007704	lsm12b	57	86.310	ENSRNOG00000020894	Lsm12	86	86.310	Rattus_norvegicus
ENSKMAG00000007704	lsm12b	65	79.581	ENSRBIG00000027910	LSM12	86	86.310	Rhinopithecus_bieti
ENSKMAG00000007704	lsm12b	65	79.581	ENSRROG00000045530	-	97	86.310	Rhinopithecus_roxellana
ENSKMAG00000007704	lsm12b	58	47.399	ENSRROG00000000537	-	81	47.399	Rhinopithecus_roxellana
ENSKMAG00000007704	lsm12b	57	86.310	ENSSBOG00000025310	LSM12	86	86.310	Saimiri_boliviensis_boliviensis
ENSKMAG00000007704	lsm12b	56	94.611	ENSSFOG00015009612	lsm12	85	94.611	Scleropages_formosus
ENSKMAG00000007704	lsm12b	59	90.341	ENSSFOG00015020392	lsm12a	89	90.341	Scleropages_formosus
ENSKMAG00000007704	lsm12b	56	97.006	ENSSMAG00000008089	lsm12b	85	97.006	Scophthalmus_maximus
ENSKMAG00000007704	lsm12b	56	97.006	ENSSDUG00000012711	lsm12b	85	97.006	Seriola_dumerili
ENSKMAG00000007704	lsm12b	56	97.006	ENSSLDG00000007404	lsm12b	85	97.006	Seriola_lalandi_dorsalis
ENSKMAG00000007704	lsm12b	56	85.629	ENSSPUG00000011984	LSM12	85	85.629	Sphenodon_punctatus
ENSKMAG00000007704	lsm12b	56	97.605	ENSSPAG00000017058	lsm12b	85	97.605	Stegastes_partitus
ENSKMAG00000007704	lsm12b	57	86.310	ENSSSCG00000032394	LSM12	86	86.310	Sus_scrofa
ENSKMAG00000007704	lsm12b	56	95.808	ENSTRUG00000007121	lsm12b	85	95.808	Takifugu_rubripes
ENSKMAG00000007704	lsm12b	56	95.808	ENSTNIG00000014436	lsm12b	85	95.808	Tetraodon_nigroviridis
ENSKMAG00000007704	lsm12b	57	84.524	ENSTBEG00000012392	-	86	84.524	Tupaia_belangeri
ENSKMAG00000007704	lsm12b	57	86.310	ENSTBEG00000012523	-	86	86.310	Tupaia_belangeri
ENSKMAG00000007704	lsm12b	57	86.310	ENSTTRG00000010433	LSM12	86	86.310	Tursiops_truncatus
ENSKMAG00000007704	lsm12b	57	86.310	ENSUAMG00000006313	LSM12	86	86.310	Ursus_americanus
ENSKMAG00000007704	lsm12b	56	80.838	ENSVPAG00000011145	LSM12	85	80.838	Vicugna_pacos
ENSKMAG00000007704	lsm12b	57	86.310	ENSVVUG00000017581	LSM12	86	86.310	Vulpes_vulpes
ENSKMAG00000007704	lsm12b	56	97.006	ENSXCOG00000003994	lsm12b	85	97.006	Xiphophorus_couchianus
ENSKMAG00000007704	lsm12b	56	97.006	ENSXMAG00000020950	lsm12b	85	97.006	Xiphophorus_maculatus