EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000007707 (Gene tree)
Gene ID: 108248700
Gene Symbol: srp54
Alias: zgc:55842|zgc:85713
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 17873 bases
Position: chrLWHD01000367.1:81185-99057
Accession: 108248700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000010290	SRP54	PF00448.22	1.9e-77	1	1
ENSKMAP00000010290	SRP54_N	PF02881.19	8.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000010452	-	2443	XM_017437643	ENSKMAP00000010290	504 (aa)	XP_017293132	UPI0007F895D1

Gene Model

Click here to download ENSKMAG00000007707's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000007707's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000007707	srp54	100	95.437	ENSG00000100883	SRP54	100	97.674	Homo_sapiens
ENSKMAG00000007707	srp54	100	99.206	ENSAPOG00000011314	srp54	100	99.206	Acanthochromis_polyacanthus
ENSKMAG00000007707	srp54	100	95.437	ENSAMEG00000015544	SRP54	100	95.437	Ailuropoda_melanoleuca
ENSKMAG00000007707	srp54	89	97.327	ENSACIG00000022831	srp54	97	97.327	Amphilophus_citrinellus
ENSKMAG00000007707	srp54	100	99.206	ENSAOCG00000019401	srp54	100	99.206	Amphiprion_ocellaris
ENSKMAG00000007707	srp54	100	99.206	ENSAPEG00000001977	srp54	100	99.206	Amphiprion_percula
ENSKMAG00000007707	srp54	100	99.008	ENSATEG00000013877	srp54	100	99.008	Anabas_testudineus
ENSKMAG00000007707	srp54	94	94.726	ENSAPLG00000010125	SRP54	95	94.726	Anas_platyrhynchos
ENSKMAG00000007707	srp54	86	91.935	ENSACAG00000010631	-	100	91.935	Anolis_carolinensis
ENSKMAG00000007707	srp54	100	94.841	ENSACAG00000002103	-	100	94.841	Anolis_carolinensis
ENSKMAG00000007707	srp54	65	79.758	ENSACAG00000001124	-	100	79.758	Anolis_carolinensis
ENSKMAG00000007707	srp54	100	95.437	ENSANAG00000022133	SRP54	100	95.437	Aotus_nancymaae
ENSKMAG00000007707	srp54	100	98.810	ENSACLG00000015866	srp54	100	98.810	Astatotilapia_calliptera
ENSKMAG00000007707	srp54	100	97.619	ENSAMXG00000032669	SRP54	100	97.619	Astyanax_mexicanus
ENSKMAG00000007707	srp54	100	95.437	ENSBTAG00000019085	SRP54	100	95.437	Bos_taurus
ENSKMAG00000007707	srp54	98	73.293	WBGene00009012	F21D5.7	100	73.293	Caenorhabditis_elegans
ENSKMAG00000007707	srp54	100	95.437	ENSCJAG00000006581	SRP54	100	95.437	Callithrix_jacchus
ENSKMAG00000007707	srp54	100	95.437	ENSCAFG00000013331	SRP54	100	95.437	Canis_familiaris
ENSKMAG00000007707	srp54	100	95.437	ENSCAFG00020023427	SRP54	100	95.437	Canis_lupus_dingo
ENSKMAG00000007707	srp54	100	95.437	ENSCHIG00000026345	SRP54	100	95.437	Capra_hircus
ENSKMAG00000007707	srp54	100	95.238	ENSTSYG00000002680	-	100	95.238	Carlito_syrichta
ENSKMAG00000007707	srp54	94	83.789	ENSTSYG00000035333	-	93	83.789	Carlito_syrichta
ENSKMAG00000007707	srp54	94	61.224	ENSCAPG00000008780	SRP54	100	61.224	Cavia_aperea
ENSKMAG00000007707	srp54	100	95.040	ENSCPOG00000003691	SRP54	100	95.040	Cavia_porcellus
ENSKMAG00000007707	srp54	90	95.000	ENSCCAG00000024179	SRP54	100	95.227	Cebus_capucinus
ENSKMAG00000007707	srp54	100	95.437	ENSCATG00000034083	SRP54	100	95.437	Cercocebus_atys
ENSKMAG00000007707	srp54	100	95.437	ENSCLAG00000015076	SRP54	100	95.437	Chinchilla_lanigera
ENSKMAG00000007707	srp54	100	95.437	ENSCSAG00000015575	SRP54	100	95.437	Chlorocebus_sabaeus
ENSKMAG00000007707	srp54	95	84.407	ENSCHOG00000008986	SRP54	100	84.407	Choloepus_hoffmanni
ENSKMAG00000007707	srp54	100	95.437	ENSCPBG00000026195	SRP54	100	95.437	Chrysemys_picta_bellii
ENSKMAG00000007707	srp54	100	82.937	ENSCING00000007380	-	100	82.937	Ciona_intestinalis
ENSKMAG00000007707	srp54	100	95.437	ENSCANG00000028532	SRP54	100	95.437	Colobus_angolensis_palliatus
ENSKMAG00000007707	srp54	100	95.437	ENSCGRG00001009525	-	100	95.437	Cricetulus_griseus_chok1gshd
ENSKMAG00000007707	srp54	76	95.584	ENSCGRG00000009453	-	89	95.584	Cricetulus_griseus_crigri
ENSKMAG00000007707	srp54	100	98.214	ENSCSEG00000012392	srp54	100	98.214	Cynoglossus_semilaevis
ENSKMAG00000007707	srp54	100	99.206	ENSCVAG00000010395	srp54	100	99.206	Cyprinodon_variegatus
ENSKMAG00000007707	srp54	100	98.016	ENSDARG00000098367	srp54	100	98.016	Danio_rerio
ENSKMAG00000007707	srp54	100	95.437	ENSDNOG00000032525	SRP54	100	95.437	Dasypus_novemcinctus
ENSKMAG00000007707	srp54	89	80.088	ENSDORG00000005159	-	98	80.088	Dipodomys_ordii
ENSKMAG00000007707	srp54	96	79.794	FBgn0010747	Srp54k	98	79.317	Drosophila_melanogaster
ENSKMAG00000007707	srp54	100	94.246	ENSETEG00000016307	-	100	94.246	Echinops_telfairi
ENSKMAG00000007707	srp54	83	55.981	ENSETEG00000012102	-	99	55.981	Echinops_telfairi
ENSKMAG00000007707	srp54	100	88.690	ENSEBUG00000009437	-	100	88.690	Eptatretus_burgeri
ENSKMAG00000007707	srp54	100	95.437	ENSEASG00005002057	SRP54	100	95.437	Equus_asinus_asinus
ENSKMAG00000007707	srp54	99	95.181	ENSECAG00000018042	SRP54	98	95.181	Equus_caballus
ENSKMAG00000007707	srp54	100	80.159	ENSEEUG00000001511	SRP54	100	80.159	Erinaceus_europaeus
ENSKMAG00000007707	srp54	100	97.619	ENSELUG00000003395	srp54	100	97.619	Esox_lucius
ENSKMAG00000007707	srp54	100	95.238	ENSFCAG00000032033	SRP54	100	95.238	Felis_catus
ENSKMAG00000007707	srp54	100	95.040	ENSFALG00000005995	SRP54	100	95.040	Ficedula_albicollis
ENSKMAG00000007707	srp54	100	95.437	ENSFDAG00000016767	SRP54	100	95.437	Fukomys_damarensis
ENSKMAG00000007707	srp54	100	98.810	ENSFHEG00000004263	srp54	100	98.810	Fundulus_heteroclitus
ENSKMAG00000007707	srp54	95	92.259	ENSGMOG00000011391	srp54	100	92.259	Gadus_morhua
ENSKMAG00000007707	srp54	100	95.040	ENSGALG00000023135	SRP54	100	95.040	Gallus_gallus
ENSKMAG00000007707	srp54	100	99.405	ENSGAFG00000011586	srp54	100	99.405	Gambusia_affinis
ENSKMAG00000007707	srp54	100	98.413	ENSGACG00000004181	srp54	100	98.413	Gasterosteus_aculeatus
ENSKMAG00000007707	srp54	100	95.437	ENSGAGG00000014766	SRP54	100	95.437	Gopherus_agassizii
ENSKMAG00000007707	srp54	100	95.437	ENSGGOG00000002926	SRP54	100	95.437	Gorilla_gorilla
ENSKMAG00000007707	srp54	100	98.810	ENSHBUG00000005678	srp54	100	98.810	Haplochromis_burtoni
ENSKMAG00000007707	srp54	100	95.437	ENSHGLG00000002850	SRP54	100	95.437	Heterocephalus_glaber_female
ENSKMAG00000007707	srp54	100	66.337	ENSHGLG00100007281	-	100	66.337	Heterocephalus_glaber_male
ENSKMAG00000007707	srp54	100	95.437	ENSHGLG00100005263	SRP54	100	95.437	Heterocephalus_glaber_male
ENSKMAG00000007707	srp54	100	97.024	ENSHCOG00000021127	srp54	100	97.024	Hippocampus_comes
ENSKMAG00000007707	srp54	100	97.222	ENSIPUG00000001420	srp54	100	97.222	Ictalurus_punctatus
ENSKMAG00000007707	srp54	100	95.437	ENSSTOG00000016023	SRP54	100	95.437	Ictidomys_tridecemlineatus
ENSKMAG00000007707	srp54	100	90.675	ENSJJAG00000013417	-	100	90.675	Jaculus_jaculus
ENSKMAG00000007707	srp54	87	73.636	ENSJJAG00000016404	-	100	73.636	Jaculus_jaculus
ENSKMAG00000007707	srp54	100	99.008	ENSLBEG00000021122	srp54	100	99.008	Labrus_bergylta
ENSKMAG00000007707	srp54	100	99.008	ENSLBEG00000018690	srp54	100	99.008	Labrus_bergylta
ENSKMAG00000007707	srp54	100	95.040	ENSLACG00000017890	SRP54	100	95.040	Latimeria_chalumnae
ENSKMAG00000007707	srp54	100	97.619	ENSLOCG00000009440	srp54	100	97.619	Lepisosteus_oculatus
ENSKMAG00000007707	srp54	100	95.437	ENSLAFG00000012007	SRP54	100	95.437	Loxodonta_africana
ENSKMAG00000007707	srp54	100	95.437	ENSMFAG00000044371	SRP54	100	95.437	Macaca_fascicularis
ENSKMAG00000007707	srp54	100	95.437	ENSMMUG00000015073	FAM177A1	100	95.437	Macaca_mulatta
ENSKMAG00000007707	srp54	100	95.437	ENSMNEG00000006947	SRP54	100	95.437	Macaca_nemestrina
ENSKMAG00000007707	srp54	100	95.437	ENSMLEG00000042251	SRP54	100	95.437	Mandrillus_leucophaeus
ENSKMAG00000007707	srp54	100	98.810	ENSMAMG00000004803	srp54	100	98.810	Mastacembelus_armatus
ENSKMAG00000007707	srp54	100	98.810	ENSMZEG00005027528	srp54	100	98.810	Maylandia_zebra
ENSKMAG00000007707	srp54	100	90.514	ENSMGAG00000012481	SRP54	100	90.514	Meleagris_gallopavo
ENSKMAG00000007707	srp54	100	95.635	ENSMAUG00000014447	-	100	95.635	Mesocricetus_auratus
ENSKMAG00000007707	srp54	100	95.437	ENSMICG00000010270	SRP54	100	95.437	Microcebus_murinus
ENSKMAG00000007707	srp54	87	95.455	ENSMOCG00000000948	-	100	95.455	Microtus_ochrogaster
ENSKMAG00000007707	srp54	90	96.256	ENSMMOG00000020303	srp54	99	96.256	Mola_mola
ENSKMAG00000007707	srp54	100	95.437	ENSMODG00000012925	-	100	95.437	Monodelphis_domestica
ENSKMAG00000007707	srp54	100	95.437	ENSMODG00000023150	-	100	95.437	Monodelphis_domestica
ENSKMAG00000007707	srp54	88	98.646	ENSMALG00000009163	srp54	98	98.646	Monopterus_albus
ENSKMAG00000007707	srp54	100	95.635	MGP_CAROLIEiJ_G0017754	-	100	95.635	Mus_caroli
ENSKMAG00000007707	srp54	100	95.635	ENSMUSG00000112449	Srp54b	100	95.635	Mus_musculus
ENSKMAG00000007707	srp54	100	94.841	ENSMUSG00000079108	Srp54c	100	94.841	Mus_musculus
ENSKMAG00000007707	srp54	100	95.635	ENSMUSG00000073079	Srp54a	100	96.364	Mus_musculus
ENSKMAG00000007707	srp54	100	95.635	MGP_PahariEiJ_G0029510	-	100	95.635	Mus_pahari
ENSKMAG00000007707	srp54	100	95.437	ENSMPUG00000016302	SRP54	100	95.437	Mustela_putorius_furo
ENSKMAG00000007707	srp54	100	94.841	ENSMLUG00000008958	SRP54	100	94.841	Myotis_lucifugus
ENSKMAG00000007707	srp54	100	86.310	ENSNGAG00000019806	-	100	86.310	Nannospalax_galili
ENSKMAG00000007707	srp54	87	98.864	ENSNBRG00000006000	srp54	100	98.864	Neolamprologus_brichardi
ENSKMAG00000007707	srp54	100	95.437	ENSNLEG00000003496	SRP54	100	95.437	Nomascus_leucogenys
ENSKMAG00000007707	srp54	67	96.429	ENSMEUG00000000138	-	76	96.429	Notamacropus_eugenii
ENSKMAG00000007707	srp54	58	96.721	ENSOPRG00000014502	-	60	96.721	Ochotona_princeps
ENSKMAG00000007707	srp54	100	95.437	ENSODEG00000004865	SRP54	100	95.437	Octodon_degus
ENSKMAG00000007707	srp54	100	98.810	ENSONIG00000011768	srp54	100	98.810	Oreochromis_niloticus
ENSKMAG00000007707	srp54	100	95.437	ENSOANG00000014051	SRP54	100	95.437	Ornithorhynchus_anatinus
ENSKMAG00000007707	srp54	100	94.841	ENSOCUG00000007838	SRP54	100	94.841	Oryctolagus_cuniculus
ENSKMAG00000007707	srp54	100	98.611	ENSORLG00000010027	srp54	100	98.611	Oryzias_latipes
ENSKMAG00000007707	srp54	100	98.611	ENSORLG00020001878	srp54	100	98.611	Oryzias_latipes_hni
ENSKMAG00000007707	srp54	100	98.611	ENSORLG00015021866	srp54	100	98.611	Oryzias_latipes_hsok
ENSKMAG00000007707	srp54	100	98.413	ENSOMEG00000020952	srp54	100	98.413	Oryzias_melastigma
ENSKMAG00000007707	srp54	100	95.437	ENSOGAG00000012188	SRP54	100	95.437	Otolemur_garnettii
ENSKMAG00000007707	srp54	100	95.437	ENSOARG00000007160	SRP54	100	95.437	Ovis_aries
ENSKMAG00000007707	srp54	100	95.437	ENSPPAG00000017434	SRP54	100	95.437	Pan_paniscus
ENSKMAG00000007707	srp54	100	94.444	ENSPPRG00000014047	SRP54	100	94.444	Panthera_pardus
ENSKMAG00000007707	srp54	100	95.238	ENSPTIG00000000744	SRP54	96	95.238	Panthera_tigris_altaica
ENSKMAG00000007707	srp54	100	95.437	ENSPTRG00000006259	FAM177A1	100	95.437	Pan_troglodytes
ENSKMAG00000007707	srp54	100	95.437	ENSPANG00000023853	SRP54	100	95.437	Papio_anubis
ENSKMAG00000007707	srp54	100	97.421	ENSPKIG00000001953	srp54	100	97.421	Paramormyrops_kingsleyae
ENSKMAG00000007707	srp54	100	95.238	ENSPSIG00000006476	SRP54	100	95.238	Pelodiscus_sinensis
ENSKMAG00000007707	srp54	91	95.870	ENSPMGG00000004127	srp54	99	95.870	Periophthalmus_magnuspinnatus
ENSKMAG00000007707	srp54	100	83.532	ENSPEMG00000019634	-	100	83.532	Peromyscus_maniculatus_bairdii
ENSKMAG00000007707	srp54	100	89.881	ENSPMAG00000006078	-	100	89.881	Petromyzon_marinus
ENSKMAG00000007707	srp54	100	95.437	ENSPCIG00000016175	SRP54	100	95.437	Phascolarctos_cinereus
ENSKMAG00000007707	srp54	100	99.405	ENSPFOG00000008870	srp54	100	99.405	Poecilia_formosa
ENSKMAG00000007707	srp54	100	99.405	ENSPLAG00000009889	srp54	100	99.405	Poecilia_latipinna
ENSKMAG00000007707	srp54	100	99.405	ENSPMEG00000008601	srp54	100	99.405	Poecilia_mexicana
ENSKMAG00000007707	srp54	100	99.405	ENSPREG00000004505	srp54	100	99.405	Poecilia_reticulata
ENSKMAG00000007707	srp54	100	90.476	ENSPPYG00000005739	SRP54	100	90.476	Pongo_abelii
ENSKMAG00000007707	srp54	100	91.865	ENSPCAG00000006268	SRP54	100	91.865	Procavia_capensis
ENSKMAG00000007707	srp54	100	93.465	ENSPCOG00000022473	SRP54	100	93.465	Propithecus_coquereli
ENSKMAG00000007707	srp54	63	96.809	ENSPVAG00000010056	SRP54	82	96.809	Pteropus_vampyrus
ENSKMAG00000007707	srp54	100	98.810	ENSPNYG00000009717	srp54	100	98.810	Pundamilia_nyererei
ENSKMAG00000007707	srp54	100	97.817	ENSPNAG00000008544	srp54	100	97.817	Pygocentrus_nattereri
ENSKMAG00000007707	srp54	100	95.437	ENSRNOG00000032776	Srp54a	100	95.437	Rattus_norvegicus
ENSKMAG00000007707	srp54	100	95.437	ENSRROG00000041292	SRP54	100	95.437	Rhinopithecus_roxellana
ENSKMAG00000007707	srp54	86	51.927	YPR088C	SRP54	95	47.510	Saccharomyces_cerevisiae
ENSKMAG00000007707	srp54	94	95.148	ENSSBOG00000035145	SRP54	100	95.148	Saimiri_boliviensis_boliviensis
ENSKMAG00000007707	srp54	68	94.461	ENSSHAG00000000671	SRP54	100	94.461	Sarcophilus_harrisii
ENSKMAG00000007707	srp54	100	97.817	ENSSFOG00015013920	srp54	100	97.817	Scleropages_formosus
ENSKMAG00000007707	srp54	100	92.884	ENSSMAG00000002441	srp54	100	92.884	Scophthalmus_maximus
ENSKMAG00000007707	srp54	100	98.611	ENSSDUG00000018586	srp54	100	98.611	Seriola_dumerili
ENSKMAG00000007707	srp54	100	98.810	ENSSLDG00000010476	srp54	100	98.810	Seriola_lalandi_dorsalis
ENSKMAG00000007707	srp54	100	95.437	ENSSARG00000002744	SRP54	100	95.437	Sorex_araneus
ENSKMAG00000007707	srp54	100	95.437	ENSSPUG00000013101	SRP54	100	95.437	Sphenodon_punctatus
ENSKMAG00000007707	srp54	100	99.206	ENSSPAG00000002354	srp54	100	99.206	Stegastes_partitus
ENSKMAG00000007707	srp54	100	95.437	ENSSSCG00000001955	SRP54	100	95.437	Sus_scrofa
ENSKMAG00000007707	srp54	94	94.726	ENSTGUG00000011945	-	95	94.726	Taeniopygia_guttata
ENSKMAG00000007707	srp54	100	98.016	ENSTRUG00000007057	srp54	100	98.016	Takifugu_rubripes
ENSKMAG00000007707	srp54	100	97.222	ENSTNIG00000002589	srp54	100	97.222	Tetraodon_nigroviridis
ENSKMAG00000007707	srp54	89	86.801	ENSTBEG00000011409	SRP54	100	86.801	Tupaia_belangeri
ENSKMAG00000007707	srp54	100	86.310	ENSTTRG00000000928	SRP54	100	86.310	Tursiops_truncatus
ENSKMAG00000007707	srp54	52	95.802	ENSUAMG00000012385	SRP54	100	95.802	Ursus_americanus
ENSKMAG00000007707	srp54	100	95.437	ENSUMAG00000011234	SRP54	100	95.437	Ursus_maritimus
ENSKMAG00000007707	srp54	94	94.937	ENSVPAG00000005668	SRP54	100	94.937	Vicugna_pacos
ENSKMAG00000007707	srp54	100	95.437	ENSVVUG00000019962	SRP54	100	95.437	Vulpes_vulpes
ENSKMAG00000007707	srp54	100	81.262	ENSXETG00000012290	srp54	100	81.262	Xenopus_tropicalis
ENSKMAG00000007707	srp54	88	99.323	ENSXCOG00000004658	srp54	96	99.323	Xiphophorus_couchianus
ENSKMAG00000007707	srp54	100	99.405	ENSXMAG00000018315	srp54	100	99.405	Xiphophorus_maculatus