EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000007762 (Gene tree)
Gene ID: 108249819
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 578-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 6202 bases
Position: chrLWHD01000500.1:94582-100783
Accession: 108249819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000010313	zf-C2H2	PF00096.26	1.1e-34	1	6
ENSKMAP00000010313	zf-C2H2	PF00096.26	1.1e-34	2	6
ENSKMAP00000010313	zf-C2H2	PF00096.26	1.1e-34	3	6
ENSKMAP00000010313	zf-C2H2	PF00096.26	1.1e-34	4	6
ENSKMAP00000010313	zf-C2H2	PF00096.26	1.1e-34	5	6
ENSKMAP00000010313	zf-C2H2	PF00096.26	1.1e-34	6	6
ENSKMAP00000010313	zf-met	PF12874.7	3.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000010475	-	3917	XM_017439441	ENSKMAP00000010313	859 (aa)	XP_017294930	UPI0007F86592

Gene Model

Click here to download ENSKMAG00000007762's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000007762's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000007762	-	50	31.524	ENSKMAG00000001186	-	61	33.763
ENSKMAG00000007762	-	63	39.003	ENSKMAG00000010996	-	59	39.458
ENSKMAG00000007762	-	52	39.175	ENSKMAG00000003940	-	97	40.678
ENSKMAG00000007762	-	51	32.667	ENSKMAG00000003402	-	55	32.487
ENSKMAG00000007762	-	51	39.785	ENSKMAG00000002093	-	82	39.785
ENSKMAG00000007762	-	50	63.251	ENSKMAG00000008319	-	75	63.251
ENSKMAG00000007762	-	53	40.351	ENSKMAG00000000597	-	95	37.459

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000007762	-	64	49.640	ENSAOCG00000013038	-	96	44.444	Amphiprion_ocellaris
ENSKMAG00000007762	-	89	60.484	ENSAPEG00000018660	-	89	60.484	Amphiprion_percula
ENSKMAG00000007762	-	66	49.720	ENSFHEG00000000789	-	99	50.659	Fundulus_heteroclitus
ENSKMAG00000007762	-	73	61.429	ENSPLAG00000015715	-	95	54.545	Poecilia_latipinna
ENSKMAG00000007762	-	73	60.714	ENSPMEG00000017323	-	95	53.896	Poecilia_mexicana
ENSKMAG00000007762	-	84	78.947	ENSSDUG00000000315	-	80	78.947	Seriola_dumerili
ENSKMAG00000007762	-	73	57.047	ENSXMAG00000029138	-	95	51.592	Xiphophorus_maculatus