EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000007932 (Gene tree)
Gene ID: 108235376
Gene Symbol: -
Alias: -
Full Name: chromodomain-helicase-DNA-binding protein 4
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 22373 bases
Position: chrLWHD01000034.1:1356706-1379078
Accession: 108235376
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000010565	ResIII	PF04851.15	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000010727	-	7121	XM_017415329	ENSKMAP00000010565	1969 (aa)	XP_017270818	UPI0007F88691

Gene Model

Click here to download ENSKMAG00000007932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000007932's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000007932	-	91	86.486	ENSKMAG00000019286	chd4a	99	76.943
ENSKMAG00000007932	-	81	79.724	ENSKMAG00000017827	-	90	78.733
ENSKMAG00000007932	-	82	79.612	ENSKMAG00000019292	chd3	87	66.274

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000007932	-	92	77.372	ENSG00000111642	CHD4	99	80.215	Homo_sapiens
ENSKMAG00000007932	-	92	80.978	ENSAPOG00000008935	chd4a	99	80.815	Acanthochromis_polyacanthus
ENSKMAG00000007932	-	89	98.630	ENSACIG00000012387	-	97	98.630	Amphilophus_citrinellus
ENSKMAG00000007932	-	96	80.021	ENSACIG00000019310	chd4a	94	87.952	Amphilophus_citrinellus
ENSKMAG00000007932	-	100	89.713	ENSAOCG00000000507	-	100	90.066	Amphiprion_ocellaris
ENSKMAG00000007932	-	94	82.932	ENSAOCG00000016412	-	97	82.896	Amphiprion_ocellaris
ENSKMAG00000007932	-	84	80.465	ENSAPEG00000020306	-	85	80.465	Amphiprion_percula
ENSKMAG00000007932	-	97	87.188	ENSAPEG00000005957	-	100	87.396	Amphiprion_percula
ENSKMAG00000007932	-	96	79.409	ENSAPEG00000001757	chd4a	99	79.638	Amphiprion_percula
ENSKMAG00000007932	-	99	75.848	ENSATEG00000016428	chd4a	96	87.805	Anabas_testudineus
ENSKMAG00000007932	-	74	89.662	ENSATEG00000021141	-	88	89.595	Anabas_testudineus
ENSKMAG00000007932	-	95	74.381	ENSAPLG00000014146	-	96	73.578	Anas_platyrhynchos
ENSKMAG00000007932	-	92	76.141	ENSACAG00000006231	-	99	73.460	Anolis_carolinensis
ENSKMAG00000007932	-	92	76.806	ENSANAG00000035685	-	99	74.233	Aotus_nancymaae
ENSKMAG00000007932	-	95	79.296	ENSACLG00000015837	chd4a	99	78.454	Astatotilapia_calliptera
ENSKMAG00000007932	-	96	88.709	ENSACLG00000024468	-	100	88.883	Astatotilapia_calliptera
ENSKMAG00000007932	-	96	79.958	ENSAMXG00000010614	-	99	83.455	Astyanax_mexicanus
ENSKMAG00000007932	-	96	79.706	ENSAMXG00000019969	chd4a	98	79.674	Astyanax_mexicanus
ENSKMAG00000007932	-	92	77.126	ENSBTAG00000014734	CHD4	99	73.968	Bos_taurus
ENSKMAG00000007932	-	92	76.764	ENSCJAG00000008114	-	99	74.046	Callithrix_jacchus
ENSKMAG00000007932	-	73	80.703	ENSCAFG00000014929	CHD4	99	74.033	Canis_familiaris
ENSKMAG00000007932	-	73	80.456	ENSCAFG00020002892	-	99	73.804	Canis_lupus_dingo
ENSKMAG00000007932	-	92	76.948	ENSCHIG00000020766	-	99	74.117	Capra_hircus
ENSKMAG00000007932	-	92	76.754	ENSTSYG00000006069	-	97	74.770	Carlito_syrichta
ENSKMAG00000007932	-	92	77.235	ENSCPOG00000008504	-	99	74.569	Cavia_porcellus
ENSKMAG00000007932	-	92	77.040	ENSCCAG00000009686	-	99	74.083	Cebus_capucinus
ENSKMAG00000007932	-	92	76.835	ENSCATG00000006345	-	99	74.156	Cercocebus_atys
ENSKMAG00000007932	-	92	77.315	ENSCLAG00000012244	-	99	74.195	Chinchilla_lanigera
ENSKMAG00000007932	-	92	76.656	ENSCSAG00000010429	-	99	74.233	Chlorocebus_sabaeus
ENSKMAG00000007932	-	72	94.690	ENSCHOG00000000277	-	77	88.976	Choloepus_hoffmanni
ENSKMAG00000007932	-	95	76.127	ENSCPBG00000027716	-	92	75.493	Chrysemys_picta_bellii
ENSKMAG00000007932	-	86	62.963	ENSCSAVG00000004448	-	99	58.896	Ciona_savignyi
ENSKMAG00000007932	-	92	72.752	ENSCANG00000035317	-	97	76.433	Colobus_angolensis_palliatus
ENSKMAG00000007932	-	73	80.261	ENSCGRG00001020662	Chd4	99	73.843	Cricetulus_griseus_chok1gshd
ENSKMAG00000007932	-	73	80.743	ENSCGRG00000015920	Chd4	99	74.694	Cricetulus_griseus_crigri
ENSKMAG00000007932	-	89	88.306	ENSCSEG00000017173	chd4a	93	88.306	Cynoglossus_semilaevis
ENSKMAG00000007932	-	97	86.299	ENSCSEG00000019943	-	100	86.758	Cynoglossus_semilaevis
ENSKMAG00000007932	-	92	66.449	ENSCSEG00000018096	-	92	66.302	Cynoglossus_semilaevis
ENSKMAG00000007932	-	89	91.139	ENSCVAG00000004940	chd4a	96	91.139	Cyprinodon_variegatus
ENSKMAG00000007932	-	89	68.384	ENSCVAG00000016412	-	88	76.957	Cyprinodon_variegatus
ENSKMAG00000007932	-	99	76.730	ENSDARG00000063535	chd4a	87	81.206	Danio_rerio
ENSKMAG00000007932	-	99	73.438	ENSDNOG00000001134	-	99	74.296	Dasypus_novemcinctus
ENSKMAG00000007932	-	92	77.208	ENSEASG00005016150	-	99	74.083	Equus_asinus_asinus
ENSKMAG00000007932	-	92	77.208	ENSECAG00000022005	CHD4	99	74.083	Equus_caballus
ENSKMAG00000007932	-	86	90.040	ENSELUG00000021276	chd4a	92	85.496	Esox_lucius
ENSKMAG00000007932	-	95	83.263	ENSELUG00000018086	-	99	82.968	Esox_lucius
ENSKMAG00000007932	-	88	80.703	ENSFCAG00000006877	-	99	74.158	Felis_catus
ENSKMAG00000007932	-	73	81.146	ENSFALG00000004785	-	92	78.756	Ficedula_albicollis
ENSKMAG00000007932	-	73	78.434	ENSFDAG00000020219	-	99	72.478	Fukomys_damarensis
ENSKMAG00000007932	-	92	93.188	ENSFHEG00000012736	-	99	93.188	Fundulus_heteroclitus
ENSKMAG00000007932	-	96	77.543	ENSFHEG00000002013	chd4a	99	77.146	Fundulus_heteroclitus
ENSKMAG00000007932	-	92	65.049	ENSFHEG00000003253	-	92	79.186	Fundulus_heteroclitus
ENSKMAG00000007932	-	67	95.238	ENSGMOG00000017923	-	78	83.302	Gadus_morhua
ENSKMAG00000007932	-	54	89.587	ENSGMOG00000015722	chd4a	95	89.717	Gadus_morhua
ENSKMAG00000007932	-	50	86.290	ENSGMOG00000003394	-	78	86.290	Gadus_morhua
ENSKMAG00000007932	-	57	78.234	ENSGALG00000013565	-	97	75.783	Gallus_gallus
ENSKMAG00000007932	-	99	76.904	ENSGAFG00000002778	chd4a	99	76.838	Gambusia_affinis
ENSKMAG00000007932	-	83	97.817	ENSGAFG00000014337	-	100	97.447	Gambusia_affinis
ENSKMAG00000007932	-	96	76.230	ENSGACG00000018705	chd4a	99	78.609	Gasterosteus_aculeatus
ENSKMAG00000007932	-	54	87.219	ENSGACG00000010099	-	98	84.656	Gasterosteus_aculeatus
ENSKMAG00000007932	-	95	76.023	ENSGAGG00000001416	-	93	75.545	Gopherus_agassizii
ENSKMAG00000007932	-	92	77.154	ENSGGOG00000001930	CHD4	99	74.031	Gorilla_gorilla
ENSKMAG00000007932	-	96	89.011	ENSHBUG00000016000	-	100	88.976	Haplochromis_burtoni
ENSKMAG00000007932	-	96	75.118	ENSHBUG00000019146	chd4a	96	79.464	Haplochromis_burtoni
ENSKMAG00000007932	-	92	77.260	ENSHGLG00000003093	-	99	74.195	Heterocephalus_glaber_female
ENSKMAG00000007932	-	92	77.260	ENSHGLG00100007450	-	99	74.046	Heterocephalus_glaber_male
ENSKMAG00000007932	-	88	79.862	ENSHCOG00000017525	-	96	91.282	Hippocampus_comes
ENSKMAG00000007932	-	73	69.823	ENSHCOG00000014308	-	88	69.005	Hippocampus_comes
ENSKMAG00000007932	-	99	79.022	ENSIPUG00000005694	chd4	99	79.284	Ictalurus_punctatus
ENSKMAG00000007932	-	73	80.703	ENSSTOG00000007601	-	99	74.345	Ictidomys_tridecemlineatus
ENSKMAG00000007932	-	99	73.845	ENSJJAG00000012394	Chd4	99	74.506	Jaculus_jaculus
ENSKMAG00000007932	-	99	90.267	ENSLBEG00000012434	CHD4	100	90.095	Labrus_bergylta
ENSKMAG00000007932	-	78	70.459	ENSLBEG00000026652	-	95	69.860	Labrus_bergylta
ENSKMAG00000007932	-	99	73.645	ENSLOCG00000007438	chd4a	99	77.875	Lepisosteus_oculatus
ENSKMAG00000007932	-	92	74.374	ENSLAFG00000022842	-	99	71.414	Loxodonta_africana
ENSKMAG00000007932	-	92	76.839	ENSMFAG00000003188	-	99	74.156	Macaca_fascicularis
ENSKMAG00000007932	-	92	75.901	ENSMMUG00000018685	-	99	73.493	Macaca_mulatta
ENSKMAG00000007932	-	92	75.095	ENSMNEG00000044776	-	99	72.370	Macaca_nemestrina
ENSKMAG00000007932	-	92	75.695	ENSMLEG00000024661	-	99	72.874	Mandrillus_leucophaeus
ENSKMAG00000007932	-	93	64.846	ENSMAMG00000002137	-	88	76.419	Mastacembelus_armatus
ENSKMAG00000007932	-	100	91.224	ENSMAMG00000002584	-	100	91.324	Mastacembelus_armatus
ENSKMAG00000007932	-	99	79.511	ENSMAMG00000018954	chd4a	97	86.454	Mastacembelus_armatus
ENSKMAG00000007932	-	96	88.808	ENSMZEG00005017761	-	100	88.930	Maylandia_zebra
ENSKMAG00000007932	-	99	79.305	ENSMZEG00005001706	chd4a	100	79.300	Maylandia_zebra
ENSKMAG00000007932	-	92	77.121	ENSMGAG00000014084	-	95	75.773	Meleagris_gallopavo
ENSKMAG00000007932	-	92	76.852	ENSMICG00000006588	-	99	73.981	Microcebus_murinus
ENSKMAG00000007932	-	73	80.772	ENSMOCG00000020624	Chd4	99	74.145	Microtus_ochrogaster
ENSKMAG00000007932	-	95	78.825	ENSMMOG00000000073	chd4a	99	78.293	Mola_mola
ENSKMAG00000007932	-	82	64.878	ENSMMOG00000013429	-	87	69.059	Mola_mola
ENSKMAG00000007932	-	82	78.849	ENSMODG00000018094	-	99	78.875	Monodelphis_domestica
ENSKMAG00000007932	-	97	76.625	ENSMALG00000005766	chd4a	83	80.330	Monopterus_albus
ENSKMAG00000007932	-	100	91.512	ENSMALG00000022494	-	100	91.411	Monopterus_albus
ENSKMAG00000007932	-	73	80.743	ENSMUSG00000063870	Chd4	99	74.294	Mus_musculus
ENSKMAG00000007932	-	92	77.265	MGP_SPRETEiJ_G0029911	Chd4	99	74.294	Mus_spretus
ENSKMAG00000007932	-	92	77.095	ENSMPUG00000016859	-	99	74.134	Mustela_putorius_furo
ENSKMAG00000007932	-	92	76.547	ENSMLUG00000014343	-	99	74.020	Myotis_lucifugus
ENSKMAG00000007932	-	80	74.266	ENSNGAG00000016920	Chd4	99	72.636	Nannospalax_galili
ENSKMAG00000007932	-	96	89.069	ENSNBRG00000021576	-	100	89.244	Neolamprologus_brichardi
ENSKMAG00000007932	-	92	76.839	ENSNLEG00000004330	-	96	74.021	Nomascus_leucogenys
ENSKMAG00000007932	-	71	89.764	ENSMEUG00000015294	-	80	89.764	Notamacropus_eugenii
ENSKMAG00000007932	-	75	96.296	ENSOPRG00000003477	-	80	96.296	Ochotona_princeps
ENSKMAG00000007932	-	92	76.982	ENSODEG00000003114	-	99	74.469	Octodon_degus
ENSKMAG00000007932	-	99	79.567	ENSONIG00000006992	chd4a	100	79.381	Oreochromis_niloticus
ENSKMAG00000007932	-	99	90.127	ENSONIG00000012953	-	99	91.286	Oreochromis_niloticus
ENSKMAG00000007932	-	99	78.546	ENSORLG00000006310	chd4a	100	78.679	Oryzias_latipes
ENSKMAG00000007932	-	86	76.395	ENSORLG00000017190	-	91	76.395	Oryzias_latipes
ENSKMAG00000007932	-	100	91.511	ENSORLG00000012477	-	100	91.561	Oryzias_latipes
ENSKMAG00000007932	-	73	70.839	ENSORLG00020011739	-	87	70.110	Oryzias_latipes_hni
ENSKMAG00000007932	-	99	78.596	ENSORLG00020006529	chd4a	100	78.729	Oryzias_latipes_hni
ENSKMAG00000007932	-	100	91.511	ENSORLG00020004891	-	100	91.511	Oryzias_latipes_hni
ENSKMAG00000007932	-	100	91.713	ENSORLG00015010692	-	100	91.713	Oryzias_latipes_hsok
ENSKMAG00000007932	-	99	78.496	ENSORLG00015019674	chd4a	100	78.629	Oryzias_latipes_hsok
ENSKMAG00000007932	-	99	79.010	ENSOMEG00000016394	chd4a	98	86.873	Oryzias_melastigma
ENSKMAG00000007932	-	89	67.568	ENSOMEG00000014929	-	90	77.632	Oryzias_melastigma
ENSKMAG00000007932	-	92	76.278	ENSOGAG00000010031	-	99	73.284	Otolemur_garnettii
ENSKMAG00000007932	-	92	77.041	ENSOARG00000007398	-	97	75.773	Ovis_aries
ENSKMAG00000007932	-	92	77.372	ENSPPAG00000029007	-	99	74.095	Pan_paniscus
ENSKMAG00000007932	-	92	77.179	ENSPPRG00000001388	-	99	74.134	Panthera_pardus
ENSKMAG00000007932	-	73	80.772	ENSPTIG00000010979	-	99	74.184	Panthera_tigris_altaica
ENSKMAG00000007932	-	92	77.154	ENSPTRG00000004580	CHD4	99	74.031	Pan_troglodytes
ENSKMAG00000007932	-	92	77.426	ENSPANG00000025409	-	99	74.132	Papio_anubis
ENSKMAG00000007932	-	96	69.942	ENSPKIG00000012023	-	90	73.111	Paramormyrops_kingsleyae
ENSKMAG00000007932	-	99	81.335	ENSPKIG00000008268	chd4a	99	80.614	Paramormyrops_kingsleyae
ENSKMAG00000007932	-	95	74.487	ENSPSIG00000015546	-	76	78.746	Pelodiscus_sinensis
ENSKMAG00000007932	-	80	80.723	ENSPMGG00000007681	-	94	80.723	Periophthalmus_magnuspinnatus
ENSKMAG00000007932	-	93	78.498	ENSPMGG00000022981	chd4a	97	77.748	Periophthalmus_magnuspinnatus
ENSKMAG00000007932	-	92	88.462	ENSPEMG00000010290	Chd4	99	72.622	Peromyscus_maniculatus_bairdii
ENSKMAG00000007932	-	72	80.641	ENSPCIG00000001846	-	99	76.915	Phascolarctos_cinereus
ENSKMAG00000007932	-	97	92.344	ENSPFOG00000013889	-	99	92.708	Poecilia_formosa
ENSKMAG00000007932	-	99	79.210	ENSPFOG00000009089	chd4a	100	78.955	Poecilia_formosa
ENSKMAG00000007932	-	98	76.875	ENSPLAG00000012712	chd4a	96	95.025	Poecilia_latipinna
ENSKMAG00000007932	-	100	92.436	ENSPLAG00000004006	-	100	92.637	Poecilia_latipinna
ENSKMAG00000007932	-	89	69.313	ENSPMEG00000015657	-	76	69.199	Poecilia_mexicana
ENSKMAG00000007932	-	92	89.851	ENSPMEG00000006064	-	91	89.188	Poecilia_mexicana
ENSKMAG00000007932	-	92	81.588	ENSPMEG00000009633	chd4a	96	86.853	Poecilia_mexicana
ENSKMAG00000007932	-	100	92.789	ENSPREG00000011359	-	100	93.041	Poecilia_reticulata
ENSKMAG00000007932	-	86	67.568	ENSPREG00000014285	-	87	80.120	Poecilia_reticulata
ENSKMAG00000007932	-	88	95.025	ENSPREG00000001202	chd4a	95	95.025	Poecilia_reticulata
ENSKMAG00000007932	-	92	75.569	ENSPPYG00000004192	-	99	73.044	Pongo_abelii
ENSKMAG00000007932	-	52	87.952	ENSPCAG00000007120	-	83	87.349	Procavia_capensis
ENSKMAG00000007932	-	92	76.881	ENSPCOG00000018635	-	99	73.705	Propithecus_coquereli
ENSKMAG00000007932	-	92	75.589	ENSPVAG00000012574	-	97	75.026	Pteropus_vampyrus
ENSKMAG00000007932	-	95	80.190	ENSPNYG00000002663	chd4a	97	79.767	Pundamilia_nyererei
ENSKMAG00000007932	-	100	91.696	ENSPNYG00000023020	-	100	91.444	Pundamilia_nyererei
ENSKMAG00000007932	-	92	88.123	ENSPNAG00000009629	chd4a	97	86.567	Pygocentrus_nattereri
ENSKMAG00000007932	-	96	79.885	ENSPNAG00000011129	-	99	80.010	Pygocentrus_nattereri
ENSKMAG00000007932	-	80	76.452	ENSRNOG00000018309	Chd4	99	74.294	Rattus_norvegicus
ENSKMAG00000007932	-	90	76.372	ENSRBIG00000041491	-	99	73.843	Rhinopithecus_bieti
ENSKMAG00000007932	-	92	76.952	ENSRROG00000042446	-	99	74.305	Rhinopithecus_roxellana
ENSKMAG00000007932	-	88	80.703	ENSSBOG00000020782	-	99	74.545	Saimiri_boliviensis_boliviensis
ENSKMAG00000007932	-	62	86.087	ENSSHAG00000015079	-	90	86.087	Sarcophilus_harrisii
ENSKMAG00000007932	-	99	80.611	ENSSFOG00015002908	chd4	97	89.723	Scleropages_formosus
ENSKMAG00000007932	-	83	80.012	ENSSMAG00000012594	chd4a	99	78.268	Scophthalmus_maximus
ENSKMAG00000007932	-	96	86.795	ENSSMAG00000010969	-	99	86.813	Scophthalmus_maximus
ENSKMAG00000007932	-	92	64.843	ENSSMAG00000017926	-	72	72.274	Scophthalmus_maximus
ENSKMAG00000007932	-	87	92.952	ENSSDUG00000002891	chd4a	97	79.945	Seriola_dumerili
ENSKMAG00000007932	-	93	92.432	ENSSDUG00000012051	-	99	91.774	Seriola_dumerili
ENSKMAG00000007932	-	93	66.505	ENSSLDG00000019750	-	85	77.293	Seriola_lalandi_dorsalis
ENSKMAG00000007932	-	88	90.638	ENSSLDG00000018645	chd4a	98	75.827	Seriola_lalandi_dorsalis
ENSKMAG00000007932	-	93	94.796	ENSSLDG00000023821	-	98	94.697	Seriola_lalandi_dorsalis
ENSKMAG00000007932	-	60	90.173	ENSSARG00000012988	-	65	90.173	Sorex_araneus
ENSKMAG00000007932	-	92	76.170	ENSSPUG00000015131	-	98	73.860	Sphenodon_punctatus
ENSKMAG00000007932	-	92	67.049	ENSSPAG00000018749	-	94	66.576	Stegastes_partitus
ENSKMAG00000007932	-	92	81.238	ENSSPAG00000013983	chd4a	99	81.470	Stegastes_partitus
ENSKMAG00000007932	-	92	77.166	ENSSSCG00000000697	-	99	74.233	Sus_scrofa
ENSKMAG00000007932	-	96	74.586	ENSTGUG00000013329	-	96	75.259	Taeniopygia_guttata
ENSKMAG00000007932	-	85	77.632	ENSTRUG00000007623	-	87	77.632	Takifugu_rubripes
ENSKMAG00000007932	-	96	85.095	ENSTRUG00000007202	-	98	88.658	Takifugu_rubripes
ENSKMAG00000007932	-	97	88.110	ENSTNIG00000008031	-	99	87.246	Tetraodon_nigroviridis
ENSKMAG00000007932	-	82	81.060	ENSTNIG00000004095	-	87	82.151	Tetraodon_nigroviridis
ENSKMAG00000007932	-	83	77.981	ENSTBEG00000011379	-	90	77.740	Tupaia_belangeri
ENSKMAG00000007932	-	94	94.872	ENSTTRG00000016102	-	97	71.251	Tursiops_truncatus
ENSKMAG00000007932	-	92	75.619	ENSUAMG00000016452	-	96	86.559	Ursus_americanus
ENSKMAG00000007932	-	89	81.944	ENSUMAG00000005336	-	96	82.506	Ursus_maritimus
ENSKMAG00000007932	-	73	80.703	ENSVVUG00000011414	-	99	74.033	Vulpes_vulpes
ENSKMAG00000007932	-	63	80.533	ENSXETG00000026410	chd4	99	85.844	Xenopus_tropicalis
ENSKMAG00000007932	-	52	70.097	ENSXETG00000018961	-	99	68.569	Xenopus_tropicalis
ENSKMAG00000007932	-	96	85.804	ENSXCOG00000019269	-	90	88.686	Xiphophorus_couchianus
ENSKMAG00000007932	-	96	85.542	ENSXMAG00000011263	-	90	88.391	Xiphophorus_maculatus
ENSKMAG00000007932	-	81	80.556	ENSXMAG00000014686	-	93	79.545	Xiphophorus_maculatus
ENSKMAG00000007932	-	77	82.831	ENSXMAG00000001037	chd4a	93	82.003	Xiphophorus_maculatus