EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000008010 (Gene tree)
Gene ID: 108248705
Gene Symbol: dkc1
Alias: fc87a02|fi24a05|fv62a07|wu:fa28f10|wu:fc87a02|wu:fi24a05|wu:fv62a07|zgc:110395
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 5806 bases
Position: chrLWHD01000367.1:244297-250102
Accession: 108248705
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000010671	TruB_N	PF01509.18	9.3e-22	1	1
ENSKMAP00000010671	PUA	PF01472.20	1.4e-16	1	1
ENSKMAP00000010671	DKCLD	PF08068.12	1.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000010833	-	1987	XM_017437652	ENSKMAP00000010671	497 (aa)	XP_017293141	UPI0007F93073

Gene Model

Click here to download ENSKMAG00000008010's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000008010's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000008010	dkc1	92	76.321	ENSG00000130826	DKC1	99	82.927	Homo_sapiens
ENSKMAG00000008010	dkc1	90	89.556	ENSAPOG00000007799	dkc1	89	88.222	Acanthochromis_polyacanthus
ENSKMAG00000008010	dkc1	85	79.263	ENSAMEG00000002776	DKC1	86	79.080	Ailuropoda_melanoleuca
ENSKMAG00000008010	dkc1	91	87.445	ENSACIG00000022614	dkc1	86	88.290	Amphilophus_citrinellus
ENSKMAG00000008010	dkc1	90	89.333	ENSAOCG00000013159	dkc1	87	88.112	Amphiprion_ocellaris
ENSKMAG00000008010	dkc1	90	89.333	ENSAPEG00000002284	dkc1	87	90.164	Amphiprion_percula
ENSKMAG00000008010	dkc1	87	86.005	ENSATEG00000013682	dkc1	86	86.499	Anabas_testudineus
ENSKMAG00000008010	dkc1	86	80.405	ENSACAG00000015600	DKC1	76	80.769	Anolis_carolinensis
ENSKMAG00000008010	dkc1	91	76.874	ENSANAG00000022732	DKC1	86	78.781	Aotus_nancymaae
ENSKMAG00000008010	dkc1	92	85.900	ENSACLG00000015605	dkc1	80	92.152	Astatotilapia_calliptera
ENSKMAG00000008010	dkc1	86	86.175	ENSAMXG00000017108	dkc1	85	86.247	Astyanax_mexicanus
ENSKMAG00000008010	dkc1	86	78.636	ENSBTAG00000013045	DKC1	87	78.458	Bos_taurus
ENSKMAG00000008010	dkc1	82	65.025	WBGene00010478	K01G5.5	97	62.500	Caenorhabditis_elegans
ENSKMAG00000008010	dkc1	85	79.909	ENSCJAG00000004210	DKC1	85	79.727	Callithrix_jacchus
ENSKMAG00000008010	dkc1	81	73.945	ENSCAFG00000009311	-	79	73.945	Canis_familiaris
ENSKMAG00000008010	dkc1	81	83.333	ENSCAFG00000019620	-	78	83.127	Canis_familiaris
ENSKMAG00000008010	dkc1	81	83.333	ENSCAFG00020008918	-	78	83.127	Canis_lupus_dingo
ENSKMAG00000008010	dkc1	85	69.767	ENSCAFG00020009379	-	82	69.767	Canis_lupus_dingo
ENSKMAG00000008010	dkc1	86	78.719	ENSCHIG00000017392	DKC1	87	78.458	Capra_hircus
ENSKMAG00000008010	dkc1	93	76.522	ENSTSYG00000007681	DKC1	86	77.212	Carlito_syrichta
ENSKMAG00000008010	dkc1	80	79.607	ENSCAPG00000003342	DKC1	92	80.597	Cavia_aperea
ENSKMAG00000008010	dkc1	87	77.955	ENSCPOG00000008825	DKC1	85	78.490	Cavia_porcellus
ENSKMAG00000008010	dkc1	86	69.910	ENSCCAG00000027418	DKC1	85	69.752	Cebus_capucinus
ENSKMAG00000008010	dkc1	92	76.110	ENSCATG00000033602	DKC1	86	78.555	Cercocebus_atys
ENSKMAG00000008010	dkc1	87	78.959	ENSCLAG00000000720	DKC1	86	79.499	Chinchilla_lanigera
ENSKMAG00000008010	dkc1	92	76.110	ENSCSAG00000006706	DKC1	86	78.555	Chlorocebus_sabaeus
ENSKMAG00000008010	dkc1	88	77.978	ENSCPBG00000005858	DKC1	86	84.119	Chrysemys_picta_bellii
ENSKMAG00000008010	dkc1	79	78.316	ENSCING00000004599	-	83	73.349	Ciona_intestinalis
ENSKMAG00000008010	dkc1	79	78.061	ENSCSAVG00000010047	-	91	75.366	Ciona_savignyi
ENSKMAG00000008010	dkc1	92	76.110	ENSCANG00000027987	DKC1	86	78.555	Colobus_angolensis_palliatus
ENSKMAG00000008010	dkc1	94	56.559	ENSCGRG00001016789	-	94	59.302	Cricetulus_griseus_chok1gshd
ENSKMAG00000008010	dkc1	86	78.054	ENSCGRG00001014574	-	86	78.588	Cricetulus_griseus_chok1gshd
ENSKMAG00000008010	dkc1	86	78.054	ENSCGRG00000016075	-	86	78.588	Cricetulus_griseus_crigri
ENSKMAG00000008010	dkc1	99	54.990	ENSCGRG00000014809	-	92	59.302	Cricetulus_griseus_crigri
ENSKMAG00000008010	dkc1	95	85.053	ENSCSEG00000012633	dkc1	89	87.529	Cynoglossus_semilaevis
ENSKMAG00000008010	dkc1	87	89.450	ENSCVAG00000010155	dkc1	84	90.867	Cyprinodon_variegatus
ENSKMAG00000008010	dkc1	87	85.648	ENSDARG00000016484	dkc1	87	85.227	Danio_rerio
ENSKMAG00000008010	dkc1	86	78.507	ENSDNOG00000004218	DKC1	86	79.043	Dasypus_novemcinctus
ENSKMAG00000008010	dkc1	56	71.326	ENSDORG00000013566	-	91	72.101	Dipodomys_ordii
ENSKMAG00000008010	dkc1	86	66.667	FBgn0259937	Nop60B	88	68.000	Drosophila_melanogaster
ENSKMAG00000008010	dkc1	79	83.544	ENSETEG00000016095	DKC1	80	83.544	Echinops_telfairi
ENSKMAG00000008010	dkc1	66	74.772	ENSEBUG00000015962	dkc1	98	78.694	Eptatretus_burgeri
ENSKMAG00000008010	dkc1	86	76.940	ENSEASG00005007484	DKC1	87	76.770	Equus_asinus_asinus
ENSKMAG00000008010	dkc1	89	78.281	ENSECAG00000023524	DKC1	87	76.770	Equus_caballus
ENSKMAG00000008010	dkc1	79	83.797	ENSEEUG00000003323	DKC1	93	83.797	Erinaceus_europaeus
ENSKMAG00000008010	dkc1	90	85.523	ENSELUG00000014538	dkc1	84	87.150	Esox_lucius
ENSKMAG00000008010	dkc1	86	78.947	ENSFCAG00000006577	DKC1	86	79.540	Felis_catus
ENSKMAG00000008010	dkc1	85	79.634	ENSFALG00000011496	DKC1	85	78.829	Ficedula_albicollis
ENSKMAG00000008010	dkc1	86	78.458	ENSFDAG00000002516	DKC1	86	79.907	Fukomys_damarensis
ENSKMAG00000008010	dkc1	90	88.814	ENSFHEG00000004627	dkc1	89	88.839	Fundulus_heteroclitus
ENSKMAG00000008010	dkc1	79	87.724	ENSGMOG00000017277	dkc1	100	87.724	Gadus_morhua
ENSKMAG00000008010	dkc1	85	81.439	ENSGALG00000005054	DKC1	84	81.293	Gallus_gallus
ENSKMAG00000008010	dkc1	90	88.914	ENSGAFG00000011486	dkc1	77	89.509	Gambusia_affinis
ENSKMAG00000008010	dkc1	80	90.955	ENSGACG00000004373	dkc1	96	92.401	Gasterosteus_aculeatus
ENSKMAG00000008010	dkc1	88	78.876	ENSGAGG00000011330	DKC1	85	80.365	Gopherus_agassizii
ENSKMAG00000008010	dkc1	92	76.321	ENSGGOG00000001045	DKC1	86	78.781	Gorilla_gorilla
ENSKMAG00000008010	dkc1	95	87.579	ENSHBUG00000012436	dkc1	90	87.082	Haplochromis_burtoni
ENSKMAG00000008010	dkc1	95	73.967	ENSHGLG00000000649	DKC1	93	74.428	Heterocephalus_glaber_female
ENSKMAG00000008010	dkc1	95	73.967	ENSHGLG00100001153	DKC1	94	74.428	Heterocephalus_glaber_male
ENSKMAG00000008010	dkc1	94	82.479	ENSHCOG00000021099	dkc1	85	86.916	Hippocampus_comes
ENSKMAG00000008010	dkc1	86	85.845	ENSIPUG00000010309	dkc1	84	86.009	Ictalurus_punctatus
ENSKMAG00000008010	dkc1	87	78.027	ENSSTOG00000001074	-	91	78.555	Ictidomys_tridecemlineatus
ENSKMAG00000008010	dkc1	93	65.272	ENSSTOG00000011904	-	82	67.793	Ictidomys_tridecemlineatus
ENSKMAG00000008010	dkc1	90	69.890	ENSSTOG00000020149	-	85	71.759	Ictidomys_tridecemlineatus
ENSKMAG00000008010	dkc1	56	72.464	ENSJJAG00000010086	-	91	72.464	Jaculus_jaculus
ENSKMAG00000008010	dkc1	86	88.318	ENSLBEG00000019122	dkc1	92	87.333	Labrus_bergylta
ENSKMAG00000008010	dkc1	90	78.271	ENSLACG00000014025	DKC1	90	84.596	Latimeria_chalumnae
ENSKMAG00000008010	dkc1	87	85.517	ENSLOCG00000013713	dkc1	88	86.525	Lepisosteus_oculatus
ENSKMAG00000008010	dkc1	87	78.781	ENSLAFG00000000221	DKC1	86	79.138	Loxodonta_africana
ENSKMAG00000008010	dkc1	92	75.899	ENSMFAG00000032398	DKC1	74	78.330	Macaca_fascicularis
ENSKMAG00000008010	dkc1	92	76.110	ENSMMUG00000005768	DKC1	86	78.555	Macaca_mulatta
ENSKMAG00000008010	dkc1	92	76.110	ENSMNEG00000034503	DKC1	86	78.555	Macaca_nemestrina
ENSKMAG00000008010	dkc1	92	76.110	ENSMLEG00000034422	DKC1	86	78.555	Mandrillus_leucophaeus
ENSKMAG00000008010	dkc1	82	90.709	ENSMAMG00000005427	dkc1	90	91.771	Mastacembelus_armatus
ENSKMAG00000008010	dkc1	95	87.789	ENSMZEG00005014503	dkc1	90	87.305	Maylandia_zebra
ENSKMAG00000008010	dkc1	77	83.503	ENSMGAG00000009238	DKC1	87	82.957	Meleagris_gallopavo
ENSKMAG00000008010	dkc1	56	70.609	ENSMAUG00000016454	-	91	71.377	Mesocricetus_auratus
ENSKMAG00000008010	dkc1	86	78.588	ENSMICG00000038751	-	87	78.588	Microcebus_murinus
ENSKMAG00000008010	dkc1	85	71.101	ENSMICG00000002818	-	99	76.374	Microcebus_murinus
ENSKMAG00000008010	dkc1	56	68.100	ENSMOCG00000001169	-	91	68.841	Microtus_ochrogaster
ENSKMAG00000008010	dkc1	82	92.195	ENSMMOG00000020348	dkc1	86	92.172	Mola_mola
ENSKMAG00000008010	dkc1	84	81.075	ENSMODG00000009243	DKC1	74	81.797	Monodelphis_domestica
ENSKMAG00000008010	dkc1	89	88.235	ENSMALG00000009454	dkc1	84	88.785	Monopterus_albus
ENSKMAG00000008010	dkc1	86	67.937	MGP_CAROLIEiJ_G0033191	Dkc1	86	80.952	Mus_caroli
ENSKMAG00000008010	dkc1	86	78.281	ENSMUSG00000031403	Dkc1	86	78.815	Mus_musculus
ENSKMAG00000008010	dkc1	87	77.252	MGP_PahariEiJ_G0031735	Dkc1	86	77.778	Mus_pahari
ENSKMAG00000008010	dkc1	86	78.054	MGP_SPRETEiJ_G0034351	Dkc1	85	78.588	Mus_spretus
ENSKMAG00000008010	dkc1	89	78.005	ENSMPUG00000016136	DKC1	83	77.303	Mustela_putorius_furo
ENSKMAG00000008010	dkc1	87	74.330	ENSMLUG00000011918	DKC1	86	74.664	Myotis_lucifugus
ENSKMAG00000008010	dkc1	56	71.685	ENSNGAG00000015724	-	91	72.464	Nannospalax_galili
ENSKMAG00000008010	dkc1	80	92.191	ENSNBRG00000005638	dkc1	80	92.405	Neolamprologus_brichardi
ENSKMAG00000008010	dkc1	86	78.733	ENSNLEG00000014323	DKC1	86	78.555	Nomascus_leucogenys
ENSKMAG00000008010	dkc1	82	80.098	ENSMEUG00000001066	DKC1	96	75.799	Notamacropus_eugenii
ENSKMAG00000008010	dkc1	70	77.522	ENSOPRG00000005248	DKC1	69	77.299	Ochotona_princeps
ENSKMAG00000008010	dkc1	82	83.863	ENSODEG00000011816	-	86	79.863	Octodon_degus
ENSKMAG00000008010	dkc1	56	71.326	ENSODEG00000000549	-	91	72.101	Octodon_degus
ENSKMAG00000008010	dkc1	95	87.789	ENSONIG00000013889	dkc1	89	87.723	Oreochromis_niloticus
ENSKMAG00000008010	dkc1	84	81.542	ENSOANG00000008713	-	88	81.542	Ornithorhynchus_anatinus
ENSKMAG00000008010	dkc1	56	60.133	ENSOANG00000022295	-	84	60.066	Ornithorhynchus_anatinus
ENSKMAG00000008010	dkc1	86	78.733	ENSOCUG00000012646	DKC1	86	78.733	Oryctolagus_cuniculus
ENSKMAG00000008010	dkc1	92	83.983	ENSORLG00000018748	dkc1	84	85.116	Oryzias_latipes
ENSKMAG00000008010	dkc1	92	85.839	ENSOMEG00000005786	dkc1	82	89.121	Oryzias_melastigma
ENSKMAG00000008010	dkc1	86	77.212	ENSOGAG00000003399	DKC1	87	77.042	Otolemur_garnettii
ENSKMAG00000008010	dkc1	86	78.947	ENSOARG00000003047	DKC1	87	78.685	Ovis_aries
ENSKMAG00000008010	dkc1	85	80.998	ENSPPAG00000023820	DKC1	86	79.007	Pan_paniscus
ENSKMAG00000008010	dkc1	86	78.947	ENSPPRG00000009104	DKC1	86	79.540	Panthera_pardus
ENSKMAG00000008010	dkc1	86	80.000	ENSPTIG00000017469	DKC1	85	80.569	Panthera_tigris_altaica
ENSKMAG00000008010	dkc1	93	75.840	ENSPTRG00000043416	-	75	78.781	Pan_troglodytes
ENSKMAG00000008010	dkc1	92	76.321	ENSPTRG00000022449	DKC1	86	78.781	Pan_troglodytes
ENSKMAG00000008010	dkc1	92	76.110	ENSPANG00000011978	DKC1	86	78.555	Papio_anubis
ENSKMAG00000008010	dkc1	86	84.722	ENSPKIG00000008443	dkc1	91	84.722	Paramormyrops_kingsleyae
ENSKMAG00000008010	dkc1	72	87.709	ENSPSIG00000013765	DKC1	86	87.709	Pelodiscus_sinensis
ENSKMAG00000008010	dkc1	92	75.519	ENSPMGG00000004097	dkc1	72	86.076	Periophthalmus_magnuspinnatus
ENSKMAG00000008010	dkc1	68	83.978	ENSPEMG00000013348	Dkc1	82	84.795	Peromyscus_maniculatus_bairdii
ENSKMAG00000008010	dkc1	82	83.744	ENSPCIG00000016706	DKC1	72	81.542	Phascolarctos_cinereus
ENSKMAG00000008010	dkc1	90	89.800	ENSPFOG00000018653	dkc1	90	90.179	Poecilia_formosa
ENSKMAG00000008010	dkc1	90	89.800	ENSPLAG00000003272	dkc1	81	90.179	Poecilia_latipinna
ENSKMAG00000008010	dkc1	90	89.579	ENSPMEG00000010413	dkc1	90	89.955	Poecilia_mexicana
ENSKMAG00000008010	dkc1	90	89.357	ENSPREG00000004100	dkc1	85	88.657	Poecilia_reticulata
ENSKMAG00000008010	dkc1	92	76.321	ENSPPYG00000020892	DKC1	87	78.781	Pongo_abelii
ENSKMAG00000008010	dkc1	75	84.492	ENSPCAG00000015034	DKC1	73	84.492	Procavia_capensis
ENSKMAG00000008010	dkc1	86	78.281	ENSPCOG00000026874	DKC1	86	78.104	Propithecus_coquereli
ENSKMAG00000008010	dkc1	85	80.425	ENSPVAG00000009222	DKC1	85	80.235	Pteropus_vampyrus
ENSKMAG00000008010	dkc1	92	84.861	ENSPNYG00000020063	dkc1	88	85.714	Pundamilia_nyererei
ENSKMAG00000008010	dkc1	86	85.287	ENSPNAG00000005780	dkc1	85	85.151	Pygocentrus_nattereri
ENSKMAG00000008010	dkc1	95	71.458	ENSRNOG00000055562	Dkc1	94	70.637	Rattus_norvegicus
ENSKMAG00000008010	dkc1	92	76.110	ENSRBIG00000028457	DKC1	74	78.555	Rhinopithecus_bieti
ENSKMAG00000008010	dkc1	92	76.110	ENSRROG00000044780	DKC1	86	78.555	Rhinopithecus_roxellana
ENSKMAG00000008010	dkc1	77	71.279	YLR175W	-	85	67.718	Saccharomyces_cerevisiae
ENSKMAG00000008010	dkc1	86	78.959	ENSSBOG00000033746	DKC1	86	78.781	Saimiri_boliviensis_boliviensis
ENSKMAG00000008010	dkc1	86	79.634	ENSSHAG00000002463	DKC1	92	80.184	Sarcophilus_harrisii
ENSKMAG00000008010	dkc1	90	82.826	ENSSFOG00015009585	dkc1	86	84.738	Scleropages_formosus
ENSKMAG00000008010	dkc1	90	86.099	ENSSMAG00000002552	dkc1	87	86.099	Scophthalmus_maximus
ENSKMAG00000008010	dkc1	86	90.845	ENSSDUG00000009963	dkc1	89	90.179	Seriola_dumerili
ENSKMAG00000008010	dkc1	86	88.941	ENSSLDG00000019342	dkc1	86	88.993	Seriola_lalandi_dorsalis
ENSKMAG00000008010	dkc1	86	75.854	ENSSARG00000001822	DKC1	87	76.147	Sorex_araneus
ENSKMAG00000008010	dkc1	92	77.778	ENSSPUG00000018907	DKC1	95	75.100	Sphenodon_punctatus
ENSKMAG00000008010	dkc1	87	91.395	ENSSPAG00000002585	dkc1	81	91.335	Stegastes_partitus
ENSKMAG00000008010	dkc1	93	75.862	ENSSSCG00000012823	DKC1	86	82.439	Sus_scrofa
ENSKMAG00000008010	dkc1	77	83.797	ENSTGUG00000006781	DKC1	88	83.123	Taeniopygia_guttata
ENSKMAG00000008010	dkc1	86	87.822	ENSTRUG00000004413	dkc1	86	87.822	Takifugu_rubripes
ENSKMAG00000008010	dkc1	86	69.595	ENSTNIG00000002582	dkc1	86	69.910	Tetraodon_nigroviridis
ENSKMAG00000008010	dkc1	59	78.644	ENSTBEG00000011262	DKC1	87	75.556	Tupaia_belangeri
ENSKMAG00000008010	dkc1	56	85.560	ENSTTRG00000008089	DKC1	55	85.560	Tursiops_truncatus
ENSKMAG00000008010	dkc1	94	75.855	ENSUAMG00000022721	DKC1	88	81.295	Ursus_americanus
ENSKMAG00000008010	dkc1	94	75.427	ENSUMAG00000016899	DKC1	98	81.955	Ursus_maritimus
ENSKMAG00000008010	dkc1	81	68.983	ENSVVUG00000021671	-	74	68.983	Vulpes_vulpes
ENSKMAG00000008010	dkc1	81	81.907	ENSVVUG00000020734	-	71	81.707	Vulpes_vulpes
ENSKMAG00000008010	dkc1	96	78.216	ENSXETG00000032517	DKC1	85	84.941	Xenopus_tropicalis
ENSKMAG00000008010	dkc1	87	87.414	ENSXCOG00000005498	dkc1	92	88.605	Xiphophorus_couchianus
ENSKMAG00000008010	dkc1	90	88.248	ENSXMAG00000004919	dkc1	90	88.839	Xiphophorus_maculatus