EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000008154 (Gene tree)
Gene ID: 108238334
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 4894 bases
Position: chrLWHD01000003.1:6735102-6739995
Accession: 108238334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000010860	RRM_1	PF00076.22	2.5e-39	1	2
ENSKMAP00000010860	RRM_1	PF00076.22	2.5e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000011029	-	2978	XM_017420345	ENSKMAP00000010860	393 (aa)	XP_017275834	UPI0007F8BC81

Gene Model

Click here to download ENSKMAG00000008154's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000008154's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000008154	sf3b4	53	36.957	ENSKMAG00000016847	pabpc1l	64	36.957
ENSKMAG00000008154	sf3b4	54	31.250	ENSKMAG00000014566	-	62	31.250
ENSKMAG00000008154	sf3b4	54	38.372	ENSKMAG00000011643	-	78	36.994

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000008154	sf3b4	58	98.246	ENSG00000143368	SF3B4	100	96.316	Homo_sapiens
ENSKMAG00000008154	sf3b4	58	98.246	ENSAMEG00000010073	SF3B4	56	96.203	Ailuropoda_melanoleuca
ENSKMAG00000008154	sf3b4	59	98.701	ENSACIG00000018455	sf3b4	70	98.312	Amphilophus_citrinellus
ENSKMAG00000008154	sf3b4	62	98.354	ENSATEG00000012844	sf3b4	66	96.629	Anabas_testudineus
ENSKMAG00000008154	sf3b4	54	100.000	ENSACAG00000010019	SF3B4	57	96.624	Anolis_carolinensis
ENSKMAG00000008154	sf3b4	58	98.246	ENSANAG00000031025	SF3B4	56	96.203	Aotus_nancymaae
ENSKMAG00000008154	sf3b4	84	91.239	ENSACLG00000014260	sf3b4	94	89.153	Astatotilapia_calliptera
ENSKMAG00000008154	sf3b4	62	98.354	ENSAMXG00000008282	sf3b4	95	83.420	Astyanax_mexicanus
ENSKMAG00000008154	sf3b4	58	98.246	ENSBTAG00000012495	SF3B4	56	96.203	Bos_taurus
ENSKMAG00000008154	sf3b4	51	96.535	ENSBTAG00000012793	-	52	94.313	Bos_taurus
ENSKMAG00000008154	sf3b4	68	71.429	WBGene00004723	sap-49	68	70.722	Caenorhabditis_elegans
ENSKMAG00000008154	sf3b4	58	98.246	ENSCAFG00000011617	SF3B4	56	96.203	Canis_familiaris
ENSKMAG00000008154	sf3b4	58	98.246	ENSCAFG00020019775	SF3B4	56	96.203	Canis_lupus_dingo
ENSKMAG00000008154	sf3b4	64	65.873	ENSCHIG00000006654	-	50	74.627	Capra_hircus
ENSKMAG00000008154	sf3b4	58	98.246	ENSCHIG00000025663	-	56	96.203	Capra_hircus
ENSKMAG00000008154	sf3b4	58	98.246	ENSTSYG00000009295	SF3B4	56	96.203	Carlito_syrichta
ENSKMAG00000008154	sf3b4	60	94.624	ENSCAPG00000006451	SF3B4	51	95.580	Cavia_aperea
ENSKMAG00000008154	sf3b4	58	98.246	ENSCPOG00000008267	SF3B4	56	96.203	Cavia_porcellus
ENSKMAG00000008154	sf3b4	75	70.000	ENSCCAG00000019823	-	51	86.449	Cebus_capucinus
ENSKMAG00000008154	sf3b4	58	97.368	ENSCCAG00000021751	-	53	95.359	Cebus_capucinus
ENSKMAG00000008154	sf3b4	58	98.246	ENSCATG00000033114	SF3B4	56	96.203	Cercocebus_atys
ENSKMAG00000008154	sf3b4	58	98.246	ENSCLAG00000015851	SF3B4	56	96.203	Chinchilla_lanigera
ENSKMAG00000008154	sf3b4	58	98.246	ENSCSAG00000018129	SF3B4	56	96.203	Chlorocebus_sabaeus
ENSKMAG00000008154	sf3b4	54	100.000	ENSCPBG00000008041	SF3B4	57	96.203	Chrysemys_picta_bellii
ENSKMAG00000008154	sf3b4	57	88.393	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSKMAG00000008154	sf3b4	53	91.429	ENSCSAVG00000007809	-	88	89.697	Ciona_savignyi
ENSKMAG00000008154	sf3b4	58	98.246	ENSCANG00000035579	SF3B4	56	96.203	Colobus_angolensis_palliatus
ENSKMAG00000008154	sf3b4	58	98.246	ENSCGRG00001003590	Sf3b4	56	96.203	Cricetulus_griseus_chok1gshd
ENSKMAG00000008154	sf3b4	58	98.246	ENSCGRG00000016914	Sf3b4	56	96.203	Cricetulus_griseus_crigri
ENSKMAG00000008154	sf3b4	70	94.161	ENSCVAG00000005536	sf3b4	96	87.037	Cyprinodon_variegatus
ENSKMAG00000008154	sf3b4	62	98.354	ENSDARG00000018574	sf3b4	67	96.629	Danio_rerio
ENSKMAG00000008154	sf3b4	56	92.727	ENSDNOG00000048908	-	55	90.830	Dasypus_novemcinctus
ENSKMAG00000008154	sf3b4	95	65.092	ENSDNOG00000037231	-	56	82.143	Dasypus_novemcinctus
ENSKMAG00000008154	sf3b4	58	98.246	ENSDORG00000016366	Sf3b4	56	96.203	Dipodomys_ordii
ENSKMAG00000008154	sf3b4	58	88.158	ENSETEG00000008963	SF3B4	56	86.498	Echinops_telfairi
ENSKMAG00000008154	sf3b4	58	98.246	ENSEASG00005001477	SF3B4	56	96.203	Equus_asinus_asinus
ENSKMAG00000008154	sf3b4	58	98.246	ENSECAG00000024737	SF3B4	56	96.203	Equus_caballus
ENSKMAG00000008154	sf3b4	89	84.571	ENSELUG00000012876	sf3b4	66	96.629	Esox_lucius
ENSKMAG00000008154	sf3b4	58	98.246	ENSFCAG00000010106	SF3B4	56	96.203	Felis_catus
ENSKMAG00000008154	sf3b4	58	98.246	ENSFDAG00000009286	SF3B4	56	96.203	Fukomys_damarensis
ENSKMAG00000008154	sf3b4	62	98.765	ENSFHEG00000008211	sf3b4	55	89.974	Fundulus_heteroclitus
ENSKMAG00000008154	sf3b4	59	97.835	ENSGMOG00000002519	sf3b4	70	96.203	Gadus_morhua
ENSKMAG00000008154	sf3b4	54	100.000	ENSGALG00000013352	SF3B4	57	96.624	Gallus_gallus
ENSKMAG00000008154	sf3b4	67	96.981	ENSGAFG00000010181	sf3b4	96	87.335	Gambusia_affinis
ENSKMAG00000008154	sf3b4	58	100.000	ENSGACG00000003819	sf3b4	60	97.468	Gasterosteus_aculeatus
ENSKMAG00000008154	sf3b4	54	100.000	ENSGAGG00000025055	SF3B4	50	96.203	Gopherus_agassizii
ENSKMAG00000008154	sf3b4	58	98.246	ENSGGOG00000004761	SF3B4	56	96.203	Gorilla_gorilla
ENSKMAG00000008154	sf3b4	79	66.875	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSKMAG00000008154	sf3b4	84	91.239	ENSHBUG00000002028	sf3b4	94	89.153	Haplochromis_burtoni
ENSKMAG00000008154	sf3b4	58	98.246	ENSHGLG00000012360	SF3B4	56	96.203	Heterocephalus_glaber_female
ENSKMAG00000008154	sf3b4	58	98.246	ENSHGLG00100008533	SF3B4	56	96.203	Heterocephalus_glaber_male
ENSKMAG00000008154	sf3b4	58	97.357	ENSHCOG00000003014	sf3b4	61	93.033	Hippocampus_comes
ENSKMAG00000008154	sf3b4	62	98.765	ENSIPUG00000012242	Sf3b4	95	83.862	Ictalurus_punctatus
ENSKMAG00000008154	sf3b4	58	98.246	ENSSTOG00000000684	-	56	96.203	Ictidomys_tridecemlineatus
ENSKMAG00000008154	sf3b4	74	66.000	ENSSTOG00000029627	-	52	73.043	Ictidomys_tridecemlineatus
ENSKMAG00000008154	sf3b4	57	71.852	ENSJJAG00000022500	Sf3b4	58	70.139	Jaculus_jaculus
ENSKMAG00000008154	sf3b4	59	98.283	ENSLBEG00000026818	sf3b4	59	97.468	Labrus_bergylta
ENSKMAG00000008154	sf3b4	61	95.000	ENSLACG00000004436	SF3B4	66	95.000	Latimeria_chalumnae
ENSKMAG00000008154	sf3b4	61	97.083	ENSLOCG00000009048	sf3b4	57	97.083	Lepisosteus_oculatus
ENSKMAG00000008154	sf3b4	58	98.246	ENSLAFG00000008531	SF3B4	56	96.203	Loxodonta_africana
ENSKMAG00000008154	sf3b4	58	98.246	ENSMFAG00000042395	SF3B4	56	96.203	Macaca_fascicularis
ENSKMAG00000008154	sf3b4	95	60.686	ENSMFAG00000039067	-	60	78.125	Macaca_fascicularis
ENSKMAG00000008154	sf3b4	58	98.246	ENSMMUG00000007256	SF3B4	56	96.203	Macaca_mulatta
ENSKMAG00000008154	sf3b4	58	98.246	ENSMNEG00000031839	SF3B4	56	96.203	Macaca_nemestrina
ENSKMAG00000008154	sf3b4	95	60.158	ENSMNEG00000031526	-	60	77.679	Macaca_nemestrina
ENSKMAG00000008154	sf3b4	58	98.246	ENSMLEG00000038667	SF3B4	56	96.203	Mandrillus_leucophaeus
ENSKMAG00000008154	sf3b4	62	97.942	ENSMAMG00000014692	sf3b4	95	89.737	Mastacembelus_armatus
ENSKMAG00000008154	sf3b4	84	91.239	ENSMZEG00005026741	sf3b4	94	89.153	Maylandia_zebra
ENSKMAG00000008154	sf3b4	54	100.000	ENSMGAG00000000653	SF3B4	57	96.624	Meleagris_gallopavo
ENSKMAG00000008154	sf3b4	58	98.246	ENSMAUG00000015266	Sf3b4	56	96.203	Mesocricetus_auratus
ENSKMAG00000008154	sf3b4	58	98.246	ENSMICG00000044961	SF3B4	56	96.203	Microcebus_murinus
ENSKMAG00000008154	sf3b4	58	98.246	ENSMOCG00000013658	-	56	96.203	Microtus_ochrogaster
ENSKMAG00000008154	sf3b4	52	98.049	ENSMOCG00000014155	-	56	93.860	Microtus_ochrogaster
ENSKMAG00000008154	sf3b4	58	98.246	ENSMODG00000018767	SF3B4	56	96.203	Monodelphis_domestica
ENSKMAG00000008154	sf3b4	68	95.522	ENSMALG00000006174	sf3b4	67	95.522	Monopterus_albus
ENSKMAG00000008154	sf3b4	58	98.246	MGP_CAROLIEiJ_G0025365	Sf3b4	56	96.203	Mus_caroli
ENSKMAG00000008154	sf3b4	58	98.246	ENSMUSG00000068856	Sf3b4	56	96.203	Mus_musculus
ENSKMAG00000008154	sf3b4	58	98.246	MGP_PahariEiJ_G0026809	Sf3b4	56	96.203	Mus_pahari
ENSKMAG00000008154	sf3b4	58	98.246	MGP_SPRETEiJ_G0026309	Sf3b4	56	96.203	Mus_spretus
ENSKMAG00000008154	sf3b4	58	98.246	ENSMPUG00000005563	SF3B4	56	96.203	Mustela_putorius_furo
ENSKMAG00000008154	sf3b4	58	98.246	ENSMLUG00000010789	SF3B4	56	96.203	Myotis_lucifugus
ENSKMAG00000008154	sf3b4	58	98.246	ENSNGAG00000016337	Sf3b4	56	96.203	Nannospalax_galili
ENSKMAG00000008154	sf3b4	84	91.843	ENSNBRG00000013865	sf3b4	94	89.683	Neolamprologus_brichardi
ENSKMAG00000008154	sf3b4	92	66.402	ENSNLEG00000000537	-	60	86.920	Nomascus_leucogenys
ENSKMAG00000008154	sf3b4	100	47.775	ENSNLEG00000009693	-	98	47.775	Nomascus_leucogenys
ENSKMAG00000008154	sf3b4	58	93.860	ENSOPRG00000010808	SF3B4	56	91.983	Ochotona_princeps
ENSKMAG00000008154	sf3b4	61	80.083	ENSODEG00000003597	-	59	80.083	Octodon_degus
ENSKMAG00000008154	sf3b4	92	57.979	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSKMAG00000008154	sf3b4	88	90.462	ENSONIG00000002730	sf3b4	94	89.153	Oreochromis_niloticus
ENSKMAG00000008154	sf3b4	66	71.642	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSKMAG00000008154	sf3b4	58	98.246	ENSOCUG00000004614	SF3B4	56	96.203	Oryctolagus_cuniculus
ENSKMAG00000008154	sf3b4	76	88.704	ENSORLG00000003062	sf3b4	61	98.312	Oryzias_latipes
ENSKMAG00000008154	sf3b4	76	88.704	ENSORLG00020000687	sf3b4	59	98.312	Oryzias_latipes_hni
ENSKMAG00000008154	sf3b4	76	88.704	ENSORLG00015010989	sf3b4	59	98.312	Oryzias_latipes_hsok
ENSKMAG00000008154	sf3b4	59	98.707	ENSOMEG00000013694	sf3b4	68	95.941	Oryzias_melastigma
ENSKMAG00000008154	sf3b4	58	98.246	ENSOGAG00000006265	SF3B4	56	96.203	Otolemur_garnettii
ENSKMAG00000008154	sf3b4	63	78.629	ENSOARG00000007368	-	57	79.828	Ovis_aries
ENSKMAG00000008154	sf3b4	58	98.246	ENSOARG00000020718	-	56	96.203	Ovis_aries
ENSKMAG00000008154	sf3b4	58	98.246	ENSPPAG00000040904	SF3B4	56	96.203	Pan_paniscus
ENSKMAG00000008154	sf3b4	78	73.968	ENSPPAG00000030024	-	58	86.076	Pan_paniscus
ENSKMAG00000008154	sf3b4	58	98.246	ENSPPRG00000007384	SF3B4	56	96.203	Panthera_pardus
ENSKMAG00000008154	sf3b4	58	98.246	ENSPTIG00000014530	SF3B4	56	96.203	Panthera_tigris_altaica
ENSKMAG00000008154	sf3b4	58	98.246	ENSPTRG00000001243	SF3B4	56	96.203	Pan_troglodytes
ENSKMAG00000008154	sf3b4	78	74.026	ENSPTRG00000049727	-	59	86.498	Pan_troglodytes
ENSKMAG00000008154	sf3b4	58	98.246	ENSPANG00000005126	SF3B4	56	96.203	Papio_anubis
ENSKMAG00000008154	sf3b4	62	97.942	ENSPKIG00000020669	sf3b4	95	84.656	Paramormyrops_kingsleyae
ENSKMAG00000008154	sf3b4	58	98.246	ENSPEMG00000017568	Sf3b4	56	96.203	Peromyscus_maniculatus_bairdii
ENSKMAG00000008154	sf3b4	54	95.305	ENSPMAG00000007842	-	55	90.717	Petromyzon_marinus
ENSKMAG00000008154	sf3b4	58	98.246	ENSPCIG00000008765	SF3B4	56	96.203	Phascolarctos_cinereus
ENSKMAG00000008154	sf3b4	68	97.026	ENSPFOG00000005754	sf3b4	96	88.127	Poecilia_formosa
ENSKMAG00000008154	sf3b4	68	97.026	ENSPLAG00000001401	sf3b4	74	97.026	Poecilia_latipinna
ENSKMAG00000008154	sf3b4	68	96.654	ENSPMEG00000014452	sf3b4	55	87.599	Poecilia_mexicana
ENSKMAG00000008154	sf3b4	70	96.350	ENSPREG00000011076	sf3b4	67	97.026	Poecilia_reticulata
ENSKMAG00000008154	sf3b4	53	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSKMAG00000008154	sf3b4	58	98.246	ENSPCOG00000015399	SF3B4	56	96.203	Propithecus_coquereli
ENSKMAG00000008154	sf3b4	58	98.246	ENSPVAG00000014171	SF3B4	56	96.203	Pteropus_vampyrus
ENSKMAG00000008154	sf3b4	84	91.239	ENSPNYG00000012700	sf3b4	94	89.153	Pundamilia_nyererei
ENSKMAG00000008154	sf3b4	62	97.531	ENSPNAG00000000686	sf3b4	95	82.850	Pygocentrus_nattereri
ENSKMAG00000008154	sf3b4	58	98.246	ENSRNOG00000021181	Sf3b4	56	96.203	Rattus_norvegicus
ENSKMAG00000008154	sf3b4	58	98.246	ENSRBIG00000043392	SF3B4	56	96.203	Rhinopithecus_bieti
ENSKMAG00000008154	sf3b4	93	58.031	ENSRROG00000028213	-	58	73.362	Rhinopithecus_roxellana
ENSKMAG00000008154	sf3b4	58	98.246	ENSRROG00000029366	SF3B4	56	96.203	Rhinopithecus_roxellana
ENSKMAG00000008154	sf3b4	58	97.807	ENSSBOG00000012310	-	56	95.781	Saimiri_boliviensis_boliviensis
ENSKMAG00000008154	sf3b4	78	63.636	ENSSBOG00000025174	-	51	74.684	Saimiri_boliviensis_boliviensis
ENSKMAG00000008154	sf3b4	58	93.421	ENSSHAG00000004043	SF3B4	55	91.561	Sarcophilus_harrisii
ENSKMAG00000008154	sf3b4	62	98.354	ENSSFOG00015008864	sf3b4	66	96.629	Scleropages_formosus
ENSKMAG00000008154	sf3b4	76	91.946	ENSSMAG00000006837	sf3b4	67	96.642	Scophthalmus_maximus
ENSKMAG00000008154	sf3b4	67	96.981	ENSSDUG00000012064	sf3b4	66	96.629	Seriola_dumerili
ENSKMAG00000008154	sf3b4	67	96.970	ENSSLDG00000014226	sf3b4	94	90.526	Seriola_lalandi_dorsalis
ENSKMAG00000008154	sf3b4	63	94.715	ENSSPUG00000001028	SF3B4	59	96.610	Sphenodon_punctatus
ENSKMAG00000008154	sf3b4	62	97.942	ENSSPAG00000019219	sf3b4	94	89.182	Stegastes_partitus
ENSKMAG00000008154	sf3b4	81	55.937	ENSSSCG00000039440	-	58	62.869	Sus_scrofa
ENSKMAG00000008154	sf3b4	58	98.246	ENSSSCG00000006665	-	56	96.203	Sus_scrofa
ENSKMAG00000008154	sf3b4	62	95.041	ENSTGUG00000004470	SF3B4	93	96.203	Taeniopygia_guttata
ENSKMAG00000008154	sf3b4	81	87.421	ENSTRUG00000004516	sf3b4	67	94.030	Takifugu_rubripes
ENSKMAG00000008154	sf3b4	59	98.696	ENSTNIG00000009156	sf3b4	61	97.468	Tetraodon_nigroviridis
ENSKMAG00000008154	sf3b4	58	98.246	ENSTTRG00000005217	SF3B4	56	96.203	Tursiops_truncatus
ENSKMAG00000008154	sf3b4	58	98.246	ENSUAMG00000022468	SF3B4	56	96.203	Ursus_americanus
ENSKMAG00000008154	sf3b4	58	98.246	ENSUMAG00000003802	SF3B4	56	96.203	Ursus_maritimus
ENSKMAG00000008154	sf3b4	55	98.148	ENSVPAG00000008152	SF3B4	55	96.000	Vicugna_pacos
ENSKMAG00000008154	sf3b4	58	98.246	ENSVVUG00000007732	-	61	96.203	Vulpes_vulpes
ENSKMAG00000008154	sf3b4	77	78.618	ENSXETG00000011038	sf3b4	58	94.118	Xenopus_tropicalis
ENSKMAG00000008154	sf3b4	68	96.654	ENSXCOG00000019895	sf3b4	96	91.029	Xiphophorus_couchianus
ENSKMAG00000008154	sf3b4	67	97.727	ENSXMAG00000003772	sf3b4	96	91.293	Xiphophorus_maculatus