EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000008157 (Gene tree)
Gene ID: 108231440
Gene Symbol: patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 9037 bases
Position: chrLWHD01000011.1:6433146-6442182
Accession: 108231440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000010877	zf-C2H2	PF00096.26	1.1e-30	1	4
ENSKMAP00000010877	zf-C2H2	PF00096.26	1.1e-30	2	4
ENSKMAP00000010877	zf-C2H2	PF00096.26	1.1e-30	3	4
ENSKMAP00000010877	zf-C2H2	PF00096.26	1.1e-30	4	4
ENSKMAP00000010877	zf-met	PF12874.7	4.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000011046	-	1935	XM_017408514	ENSKMAP00000010877	644 (aa)	XP_017264003	-

Gene Model

Click here to download ENSKMAG00000008157's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000008157's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000008157	patz1	51	34.483	ENSKMAG00000010499	-	84	34.483
ENSKMAG00000008157	patz1	56	36.095	ENSKMAG00000009979	-	65	36.095
ENSKMAG00000008157	patz1	50	33.939	ENSKMAG00000010411	PRDM15	50	33.939
ENSKMAG00000008157	patz1	55	35.652	ENSKMAG00000013166	zbtb16b	61	35.652
ENSKMAG00000008157	patz1	50	35.593	ENSKMAG00000001186	-	55	36.170
ENSKMAG00000008157	patz1	50	32.857	ENSKMAG00000012202	-	73	31.905
ENSKMAG00000008157	patz1	78	30.612	ENSKMAG00000022244	znf131	80	30.612
ENSKMAG00000008157	patz1	52	30.385	ENSKMAG00000007699	-	68	30.588
ENSKMAG00000008157	patz1	54	33.475	ENSKMAG00000005747	-	86	32.510
ENSKMAG00000008157	patz1	51	35.096	ENSKMAG00000004988	-	85	35.096
ENSKMAG00000008157	patz1	50	35.632	ENSKMAG00000004080	zbtb17	53	33.195
ENSKMAG00000008157	patz1	50	36.893	ENSKMAG00000003940	-	97	36.893
ENSKMAG00000008157	patz1	50	31.963	ENSKMAG00000013843	-	73	36.145
ENSKMAG00000008157	patz1	52	31.356	ENSKMAG00000007657	-	59	30.508
ENSKMAG00000008157	patz1	51	33.333	ENSKMAG00000000689	-	94	33.083
ENSKMAG00000008157	patz1	52	35.039	ENSKMAG00000003766	-	96	36.747
ENSKMAG00000008157	patz1	50	33.854	ENSKMAG00000002606	-	79	38.068
ENSKMAG00000008157	patz1	69	31.933	ENSKMAG00000017553	zbtb16a	60	31.933
ENSKMAG00000008157	patz1	50	33.613	ENSKMAG00000000529	-	71	33.871
ENSKMAG00000008157	patz1	60	37.037	ENSKMAG00000021817	znf236	63	37.037
ENSKMAG00000008157	patz1	58	31.868	ENSKMAG00000021194	-	80	31.835
ENSKMAG00000008157	patz1	53	32.143	ENSKMAG00000013663	prdm5	68	38.150
ENSKMAG00000008157	patz1	60	39.181	ENSKMAG00000010903	-	57	33.333
ENSKMAG00000008157	patz1	51	34.579	ENSKMAG00000013745	-	60	32.599
ENSKMAG00000008157	patz1	56	32.174	ENSKMAG00000001192	-	80	36.158
ENSKMAG00000008157	patz1	52	36.842	ENSKMAG00000000371	-	69	35.398
ENSKMAG00000008157	patz1	59	32.653	ENSKMAG00000014939	-	60	32.203
ENSKMAG00000008157	patz1	50	33.690	ENSKMAG00000012934	-	95	33.690
ENSKMAG00000008157	patz1	59	36.095	ENSKMAG00000000597	-	95	31.897
ENSKMAG00000008157	patz1	54	30.321	ENSKMAG00000013863	-	55	33.099
ENSKMAG00000008157	patz1	52	35.437	ENSKMAG00000020025	-	92	35.294
ENSKMAG00000008157	patz1	50	31.214	ENSKMAG00000000462	-	83	30.636
ENSKMAG00000008157	patz1	72	40.206	ENSKMAG00000003820	ZBTB14	94	40.278
ENSKMAG00000008157	patz1	54	33.871	ENSKMAG00000018636	-	80	33.871
ENSKMAG00000008157	patz1	60	33.577	ENSKMAG00000002087	bcl6ab	54	36.893
ENSKMAG00000008157	patz1	50	34.043	ENSKMAG00000014002	si:ch211-79k12.2	62	33.908
ENSKMAG00000008157	patz1	50	35.961	ENSKMAG00000013290	-	91	34.483
ENSKMAG00000008157	patz1	50	32.819	ENSKMAG00000000543	-	94	36.170
ENSKMAG00000008157	patz1	51	37.438	ENSKMAG00000006633	-	68	41.791
ENSKMAG00000008157	patz1	59	36.134	ENSKMAG00000000073	-	82	50.847
ENSKMAG00000008157	patz1	65	30.721	ENSKMAG00000021716	-	74	32.389
ENSKMAG00000008157	patz1	65	33.068	ENSKMAG00000006231	-	94	38.690
ENSKMAG00000008157	patz1	59	34.127	ENSKMAG00000019130	-	83	34.127
ENSKMAG00000008157	patz1	89	31.600	ENSKMAG00000004732	zbtb41	77	30.859
ENSKMAG00000008157	patz1	51	33.143	ENSKMAG00000001171	-	76	32.743
ENSKMAG00000008157	patz1	62	32.979	ENSKMAG00000012909	-	59	33.520
ENSKMAG00000008157	patz1	50	33.908	ENSKMAG00000008319	-	70	33.908
ENSKMAG00000008157	patz1	53	33.333	ENSKMAG00000020046	-	74	33.540
ENSKMAG00000008157	patz1	64	32.512	ENSKMAG00000006450	-	80	30.412
ENSKMAG00000008157	patz1	55	33.824	ENSKMAG00000010330	zbtb47b	77	40.146
ENSKMAG00000008157	patz1	61	30.233	ENSKMAG00000000795	-	98	33.987
ENSKMAG00000008157	patz1	66	34.799	ENSKMAG00000021184	-	83	33.824
ENSKMAG00000008157	patz1	51	30.650	ENSKMAG00000015304	-	64	30.605
ENSKMAG00000008157	patz1	70	36.404	ENSKMAG00000010996	-	60	37.363
ENSKMAG00000008157	patz1	50	38.514	ENSKMAG00000002583	-	97	31.792
ENSKMAG00000008157	patz1	51	33.333	ENSKMAG00000003186	-	85	31.984

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000008157	patz1	100	57.627	ENSG00000100105	PATZ1	100	57.670	Homo_sapiens
ENSKMAG00000008157	patz1	99	88.073	ENSAPOG00000018447	patz1	100	80.514	Acanthochromis_polyacanthus
ENSKMAG00000008157	patz1	100	57.687	ENSAMEG00000007074	PATZ1	100	57.670	Ailuropoda_melanoleuca
ENSKMAG00000008157	patz1	100	88.532	ENSACIG00000016779	patz1	100	88.055	Amphilophus_citrinellus
ENSKMAG00000008157	patz1	100	82.164	ENSAPEG00000013354	patz1	100	81.259	Amphiprion_percula
ENSKMAG00000008157	patz1	100	90.943	ENSATEG00000011260	patz1	100	86.248	Anabas_testudineus
ENSKMAG00000008157	patz1	87	55.684	ENSAPLG00000003934	PATZ1	99	56.449	Anas_platyrhynchos
ENSKMAG00000008157	patz1	100	57.627	ENSANAG00000029603	PATZ1	100	57.670	Aotus_nancymaae
ENSKMAG00000008157	patz1	99	69.703	ENSAMXG00000002273	patz1	84	69.145	Astyanax_mexicanus
ENSKMAG00000008157	patz1	100	57.627	ENSBTAG00000005478	PATZ1	100	57.670	Bos_taurus
ENSKMAG00000008157	patz1	100	57.627	ENSCJAG00000010978	PATZ1	100	57.670	Callithrix_jacchus
ENSKMAG00000008157	patz1	100	57.486	ENSCAFG00000013087	PATZ1	100	57.528	Canis_familiaris
ENSKMAG00000008157	patz1	100	57.627	ENSCHIG00000020203	PATZ1	100	57.670	Capra_hircus
ENSKMAG00000008157	patz1	100	57.627	ENSTSYG00000033183	PATZ1	100	57.670	Carlito_syrichta
ENSKMAG00000008157	patz1	100	57.627	ENSCCAG00000028772	PATZ1	100	57.670	Cebus_capucinus
ENSKMAG00000008157	patz1	100	58.192	ENSCATG00000006101	PATZ1	100	57.812	Cercocebus_atys
ENSKMAG00000008157	patz1	100	57.082	ENSCPBG00000011277	PATZ1	100	57.407	Chrysemys_picta_bellii
ENSKMAG00000008157	patz1	100	58.192	ENSCANG00000024972	PATZ1	100	57.812	Colobus_angolensis_palliatus
ENSKMAG00000008157	patz1	100	56.028	ENSCGRG00001004071	Patz1	100	55.920	Cricetulus_griseus_chok1gshd
ENSKMAG00000008157	patz1	93	56.127	ENSCGRG00000004814	Patz1	100	56.012	Cricetulus_griseus_crigri
ENSKMAG00000008157	patz1	100	80.854	ENSCSEG00000001385	patz1	100	80.236	Cynoglossus_semilaevis
ENSKMAG00000008157	patz1	100	83.929	ENSCVAG00000007684	patz1	100	84.054	Cyprinodon_variegatus
ENSKMAG00000008157	patz1	100	68.868	ENSDARG00000076584	patz1	100	63.650	Danio_rerio
ENSKMAG00000008157	patz1	89	57.008	ENSDNOG00000003183	PATZ1	100	56.894	Dasypus_novemcinctus
ENSKMAG00000008157	patz1	100	57.627	ENSDORG00000023834	Patz1	100	57.670	Dipodomys_ordii
ENSKMAG00000008157	patz1	100	57.627	ENSECAG00000025030	PATZ1	100	57.670	Equus_caballus
ENSKMAG00000008157	patz1	98	74.865	ENSELUG00000002333	patz1	100	67.500	Esox_lucius
ENSKMAG00000008157	patz1	100	57.486	ENSFCAG00000030253	PATZ1	100	57.528	Felis_catus
ENSKMAG00000008157	patz1	88	56.837	ENSFALG00000007450	PATZ1	100	56.716	Ficedula_albicollis
ENSKMAG00000008157	patz1	96	54.985	ENSFDAG00000005614	PATZ1	100	54.720	Fukomys_damarensis
ENSKMAG00000008157	patz1	100	83.158	ENSFHEG00000014755	patz1	100	82.982	Fundulus_heteroclitus
ENSKMAG00000008157	patz1	100	66.949	ENSGMOG00000001062	patz1	100	66.620	Gadus_morhua
ENSKMAG00000008157	patz1	100	55.432	ENSGALG00000006934	PATZ1	100	56.497	Gallus_gallus
ENSKMAG00000008157	patz1	100	88.785	ENSGAFG00000010053	patz1	100	79.613	Gambusia_affinis
ENSKMAG00000008157	patz1	87	57.667	ENSGAGG00000003214	PATZ1	100	57.550	Gopherus_agassizii
ENSKMAG00000008157	patz1	100	57.627	ENSGGOG00000017171	PATZ1	100	57.670	Gorilla_gorilla
ENSKMAG00000008157	patz1	99	80.183	ENSHCOG00000017644	patz1	93	73.383	Hippocampus_comes
ENSKMAG00000008157	patz1	99	69.963	ENSIPUG00000017653	patz1	99	59.033	Ictalurus_punctatus
ENSKMAG00000008157	patz1	100	57.486	ENSSTOG00000020707	PATZ1	100	57.528	Ictidomys_tridecemlineatus
ENSKMAG00000008157	patz1	98	57.720	ENSJJAG00000015259	Patz1	99	58.055	Jaculus_jaculus
ENSKMAG00000008157	patz1	100	59.281	ENSLAFG00000002317	PATZ1	100	58.900	Loxodonta_africana
ENSKMAG00000008157	patz1	100	58.333	ENSMFAG00000040968	PATZ1	100	57.955	Macaca_fascicularis
ENSKMAG00000008157	patz1	100	58.333	ENSMNEG00000037588	PATZ1	100	57.955	Macaca_nemestrina
ENSKMAG00000008157	patz1	100	58.192	ENSMLEG00000030938	PATZ1	100	57.812	Mandrillus_leucophaeus
ENSKMAG00000008157	patz1	100	82.153	ENSMAMG00000023652	patz1	100	81.560	Mastacembelus_armatus
ENSKMAG00000008157	patz1	88	52.796	ENSMGAG00000008439	PATZ1	100	53.512	Meleagris_gallopavo
ENSKMAG00000008157	patz1	100	57.730	ENSMAUG00000004129	Patz1	100	57.632	Mesocricetus_auratus
ENSKMAG00000008157	patz1	100	57.768	ENSMICG00000005430	PATZ1	100	57.812	Microcebus_murinus
ENSKMAG00000008157	patz1	100	57.730	ENSMOCG00000014488	Patz1	100	57.632	Microtus_ochrogaster
ENSKMAG00000008157	patz1	99	85.321	ENSMMOG00000021679	patz1	85	85.321	Mola_mola
ENSKMAG00000008157	patz1	100	80.030	ENSMALG00000021172	patz1	100	79.586	Monopterus_albus
ENSKMAG00000008157	patz1	100	57.872	MGP_CAROLIEiJ_G0016007	Patz1	100	57.775	Mus_caroli
ENSKMAG00000008157	patz1	100	57.872	ENSMUSG00000020453	Patz1	100	57.775	Mus_musculus
ENSKMAG00000008157	patz1	100	57.872	MGP_PahariEiJ_G0016884	Patz1	100	57.775	Mus_pahari
ENSKMAG00000008157	patz1	100	57.872	MGP_SPRETEiJ_G0016846	Patz1	100	57.775	Mus_spretus
ENSKMAG00000008157	patz1	100	57.627	ENSMLUG00000009942	PATZ1	100	57.528	Myotis_lucifugus
ENSKMAG00000008157	patz1	100	57.589	ENSNGAG00000010268	Patz1	100	57.489	Nannospalax_galili
ENSKMAG00000008157	patz1	99	85.321	ENSNBRG00000016032	patz1	100	82.692	Neolamprologus_brichardi
ENSKMAG00000008157	patz1	68	57.500	ENSMEUG00000016293	PATZ1	100	57.143	Notamacropus_eugenii
ENSKMAG00000008157	patz1	100	57.203	ENSODEG00000003589	PATZ1	100	57.386	Octodon_degus
ENSKMAG00000008157	patz1	100	79.970	ENSONIG00000004248	patz1	100	79.970	Oreochromis_niloticus
ENSKMAG00000008157	patz1	100	57.746	ENSOANG00000014654	PATZ1	100	58.215	Ornithorhynchus_anatinus
ENSKMAG00000008157	patz1	100	78.704	ENSORLG00020010937	patz1	100	78.053	Oryzias_latipes_hni
ENSKMAG00000008157	patz1	100	78.298	ENSORLG00015007396	patz1	100	77.983	Oryzias_latipes_hsok
ENSKMAG00000008157	patz1	100	83.486	ENSOMEG00000006636	patz1	100	77.727	Oryzias_melastigma
ENSKMAG00000008157	patz1	100	57.768	ENSOGAG00000027905	PATZ1	100	57.812	Otolemur_garnettii
ENSKMAG00000008157	patz1	100	57.627	ENSPPAG00000033227	PATZ1	100	57.670	Pan_paniscus
ENSKMAG00000008157	patz1	100	57.486	ENSPPRG00000001573	PATZ1	100	57.528	Panthera_pardus
ENSKMAG00000008157	patz1	88	57.895	ENSPTIG00000007937	PATZ1	90	57.426	Panthera_tigris_altaica
ENSKMAG00000008157	patz1	100	57.627	ENSPTRG00000014268	PATZ1	100	57.670	Pan_troglodytes
ENSKMAG00000008157	patz1	100	58.192	ENSPANG00000006821	PATZ1	100	57.812	Papio_anubis
ENSKMAG00000008157	patz1	100	68.023	ENSPKIG00000019584	patz1	100	67.733	Paramormyrops_kingsleyae
ENSKMAG00000008157	patz1	65	57.077	ENSPSIG00000016553	-	92	56.909	Pelodiscus_sinensis
ENSKMAG00000008157	patz1	66	59.635	ENSPSIG00000011562	-	100	59.474	Pelodiscus_sinensis
ENSKMAG00000008157	patz1	100	73.490	ENSPMGG00000010196	patz1	100	73.560	Periophthalmus_magnuspinnatus
ENSKMAG00000008157	patz1	100	57.447	ENSPEMG00000005321	Patz1	100	57.632	Peromyscus_maniculatus_bairdii
ENSKMAG00000008157	patz1	100	78.761	ENSPLAG00000010425	patz1	100	80.750	Poecilia_latipinna
ENSKMAG00000008157	patz1	100	86.239	ENSPMEG00000000255	patz1	100	79.315	Poecilia_mexicana
ENSKMAG00000008157	patz1	100	79.281	ENSPREG00000002440	patz1	100	79.251	Poecilia_reticulata
ENSKMAG00000008157	patz1	100	57.627	ENSPPYG00000011732	PATZ1	100	57.670	Pongo_abelii
ENSKMAG00000008157	patz1	100	57.768	ENSPCOG00000019729	PATZ1	100	57.812	Propithecus_coquereli
ENSKMAG00000008157	patz1	100	57.486	ENSPVAG00000001749	PATZ1	100	57.528	Pteropus_vampyrus
ENSKMAG00000008157	patz1	100	82.723	ENSPNYG00000013542	patz1	100	82.698	Pundamilia_nyererei
ENSKMAG00000008157	patz1	87	63.047	ENSPNAG00000017222	patz1	100	62.561	Pygocentrus_nattereri
ENSKMAG00000008157	patz1	100	58.192	ENSRBIG00000044231	PATZ1	100	57.812	Rhinopithecus_bieti
ENSKMAG00000008157	patz1	100	58.192	ENSRROG00000037155	PATZ1	100	57.812	Rhinopithecus_roxellana
ENSKMAG00000008157	patz1	100	57.627	ENSSBOG00000003894	PATZ1	100	57.670	Saimiri_boliviensis_boliviensis
ENSKMAG00000008157	patz1	72	90.431	ENSSFOG00015013244	patz1	62	90.431	Scleropages_formosus
ENSKMAG00000008157	patz1	99	56.590	ENSSPUG00000015298	PATZ1	97	56.916	Sphenodon_punctatus
ENSKMAG00000008157	patz1	87	57.807	ENSSSCG00000010027	PATZ1	100	57.358	Sus_scrofa
ENSKMAG00000008157	patz1	100	79.598	ENSTRUG00000015366	patz1	100	79.598	Takifugu_rubripes
ENSKMAG00000008157	patz1	100	57.345	ENSTTRG00000010279	PATZ1	100	57.386	Tursiops_truncatus
ENSKMAG00000008157	patz1	100	56.535	ENSUAMG00000015014	PATZ1	100	56.573	Ursus_americanus
ENSKMAG00000008157	patz1	100	56.324	ENSXETG00000004190	patz1	100	56.701	Xenopus_tropicalis
ENSKMAG00000008157	patz1	100	88.073	ENSXMAG00000015531	patz1	100	79.228	Xiphophorus_maculatus