EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000008260 (Gene tree)
Gene ID: 108236678
Gene Symbol: npm1b
Alias: npm4
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 21673 bases
Position: chrLWHD01000041.1:509585-531257
Accession: 108236678
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000010998	Nucleoplasmin	PF03066.15	1.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000011168	-	3768	XM_017417524	ENSKMAP00000010998	294 (aa)	XP_017273013	UPI0007F8B027

Gene Model

Click here to download ENSKMAG00000008260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000008260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000008260	npm1b	57	32.353	ENSKMAG00000020800	npm3	65	37.838
ENSKMAG00000008260	npm1b	98	42.333	ENSKMAG00000010709	npm1a	97	41.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000008260	npm1b	99	84.694	ENSAPOG00000004268	npm1b	99	83.618	Acanthochromis_polyacanthus
ENSKMAG00000008260	npm1b	99	83.333	ENSAOCG00000012549	npm1b	99	80.546	Amphiprion_ocellaris
ENSKMAG00000008260	npm1b	99	82.313	ENSAPEG00000000868	npm1b	99	79.863	Amphiprion_percula
ENSKMAG00000008260	npm1b	99	81.356	ENSATEG00000006254	npm1b	99	81.017	Anabas_testudineus
ENSKMAG00000008260	npm1b	99	44.000	ENSACAG00000015626	-	96	44.674	Anolis_carolinensis
ENSKMAG00000008260	npm1b	99	61.589	ENSAMXG00000042148	npm1b	99	62.252	Astyanax_mexicanus
ENSKMAG00000008260	npm1b	64	37.000	ENSCAFG00000023359	-	67	37.079	Canis_familiaris
ENSKMAG00000008260	npm1b	96	44.898	ENSCPBG00000021221	-	58	44.369	Chrysemys_picta_bellii
ENSKMAG00000008260	npm1b	99	73.311	ENSCSEG00000004530	npm1b	99	72.973	Cynoglossus_semilaevis
ENSKMAG00000008260	npm1b	99	83.729	ENSCVAG00000013016	npm1b	99	82.034	Cyprinodon_variegatus
ENSKMAG00000008260	npm1b	100	64.686	ENSDARG00000037675	npm1b	100	65.017	Danio_rerio
ENSKMAG00000008260	npm1b	99	63.880	ENSELUG00000022123	npm1b	98	61.204	Esox_lucius
ENSKMAG00000008260	npm1b	95	45.105	ENSFALG00000003320	-	94	45.105	Ficedula_albicollis
ENSKMAG00000008260	npm1b	99	83.502	ENSFHEG00000020794	npm1b	99	81.481	Fundulus_heteroclitus
ENSKMAG00000008260	npm1b	99	61.433	ENSGMOG00000002689	npm1b	100	58.194	Gadus_morhua
ENSKMAG00000008260	npm1b	99	45.246	ENSGALG00000002197	-	73	44.590	Gallus_gallus
ENSKMAG00000008260	npm1b	99	85.034	ENSGAFG00000017709	npm1b	99	84.354	Gambusia_affinis
ENSKMAG00000008260	npm1b	99	77.055	ENSGACG00000016706	npm1b	100	77.055	Gasterosteus_aculeatus
ENSKMAG00000008260	npm1b	96	44.863	ENSGAGG00000020250	-	96	42.907	Gopherus_agassizii
ENSKMAG00000008260	npm1b	99	81.695	ENSHBUG00000019903	npm1b	94	81.356	Haplochromis_burtoni
ENSKMAG00000008260	npm1b	99	70.270	ENSHCOG00000003895	npm1b	99	69.932	Hippocampus_comes
ENSKMAG00000008260	npm1b	100	59.333	ENSIPUG00000020165	npm1b	100	60.000	Ictalurus_punctatus
ENSKMAG00000008260	npm1b	95	38.291	ENSLACG00000001779	-	100	37.500	Latimeria_chalumnae
ENSKMAG00000008260	npm1b	94	50.338	ENSLOCG00000001942	npm1b	99	51.689	Lepisosteus_oculatus
ENSKMAG00000008260	npm1b	71	77.674	ENSMAMG00000015335	npm1b	98	74.419	Mastacembelus_armatus
ENSKMAG00000008260	npm1b	94	44.014	ENSMGAG00000001591	-	100	43.816	Meleagris_gallopavo
ENSKMAG00000008260	npm1b	81	81.933	ENSMALG00000015383	npm1b	98	81.513	Monopterus_albus
ENSKMAG00000008260	npm1b	99	73.038	ENSONIG00000001397	npm1b	98	73.038	Oreochromis_niloticus
ENSKMAG00000008260	npm1b	99	68.707	ENSOMEG00000003414	npm1b	99	65.529	Oryzias_melastigma
ENSKMAG00000008260	npm1b	99	59.807	ENSPKIG00000020050	npm1b	98	57.419	Paramormyrops_kingsleyae
ENSKMAG00000008260	npm1b	97	44.444	ENSPSIG00000011204	-	92	43.448	Pelodiscus_sinensis
ENSKMAG00000008260	npm1b	99	85.424	ENSPFOG00000018357	npm1b	99	83.729	Poecilia_formosa
ENSKMAG00000008260	npm1b	99	63.087	ENSPNAG00000005498	npm1b	99	63.758	Pygocentrus_nattereri
ENSKMAG00000008260	npm1b	98	59.524	ENSSFOG00015005064	npm1b	99	57.143	Scleropages_formosus
ENSKMAG00000008260	npm1b	99	78.157	ENSSMAG00000008088	npm1b	99	77.816	Scophthalmus_maximus
ENSKMAG00000008260	npm1b	99	85.034	ENSSDUG00000007726	npm1b	99	84.014	Seriola_dumerili
ENSKMAG00000008260	npm1b	99	85.374	ENSSLDG00000021396	npm1b	99	84.354	Seriola_lalandi_dorsalis
ENSKMAG00000008260	npm1b	99	83.276	ENSSPAG00000011152	npm1b	99	83.276	Stegastes_partitus
ENSKMAG00000008260	npm1b	94	43.902	ENSTGUG00000014970	-	100	43.902	Taeniopygia_guttata
ENSKMAG00000008260	npm1b	99	74.662	ENSTRUG00000008105	npm1b	94	72.542	Takifugu_rubripes
ENSKMAG00000008260	npm1b	99	71.959	ENSTNIG00000013057	npm1b	99	71.959	Tetraodon_nigroviridis
ENSKMAG00000008260	npm1b	99	43.234	ENSXETG00000008403	npm1	99	37.748	Xenopus_tropicalis
ENSKMAG00000008260	npm1b	99	85.085	ENSXMAG00000001986	npm1b	99	83.390	Xiphophorus_maculatus