EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000008468 (Gene tree)
Gene ID: 108251741
Gene Symbol: -
Alias: -
Full Name: serrate RNA effector molecule homolog
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 9276 bases
Position: chrLWHD01001019.1:13498-22773
Accession: 108251741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000011266	ARS2	PF04959.13	8.3e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000011438	-	4972	XM_017442146	ENSKMAP00000011266	868 (aa)	XP_017297635	UPI0007F923AF

Gene Model

Click here to download ENSKMAG00000008468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000008468's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000008468	-	94	55.529	ENSKMAG00000013599	srrt	55	64.092

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000008468	-	53	63.257	ENSG00000087087	SRRT	98	69.565	Homo_sapiens
ENSKMAG00000008468	-	53	65.053	ENSAPOG00000002304	srrt	55	62.012	Acanthochromis_polyacanthus
ENSKMAG00000008468	-	94	52.982	ENSAMEG00000014506	SRRT	53	61.647	Ailuropoda_melanoleuca
ENSKMAG00000008468	-	94	53.349	ENSACIG00000015795	srrt	82	64.301	Amphilophus_citrinellus
ENSKMAG00000008468	-	78	64.842	ENSAOCG00000009693	srrt	80	64.509	Amphiprion_ocellaris
ENSKMAG00000008468	-	93	81.296	ENSAOCG00000009189	-	93	81.540	Amphiprion_ocellaris
ENSKMAG00000008468	-	93	81.296	ENSAPEG00000020016	-	93	81.540	Amphiprion_percula
ENSKMAG00000008468	-	78	64.346	ENSAPEG00000003646	srrt	82	63.278	Amphiprion_percula
ENSKMAG00000008468	-	60	85.905	ENSATEG00000003652	-	95	86.434	Anabas_testudineus
ENSKMAG00000008468	-	79	65.190	ENSATEG00000014425	srrt	80	64.644	Anabas_testudineus
ENSKMAG00000008468	-	54	61.777	ENSACAG00000001014	SRRT	93	52.721	Anolis_carolinensis
ENSKMAG00000008468	-	53	62.346	ENSANAG00000031718	SRRT	93	54.181	Aotus_nancymaae
ENSKMAG00000008468	-	53	64.211	ENSACLG00000013156	srrt	50	64.092	Astatotilapia_calliptera
ENSKMAG00000008468	-	93	80.923	ENSACLG00000009423	-	93	81.166	Astatotilapia_calliptera
ENSKMAG00000008468	-	52	62.845	ENSAMXG00000016671	srrt	52	62.012	Astyanax_mexicanus
ENSKMAG00000008468	-	53	62.140	ENSBTAG00000001134	SRRT	93	52.061	Bos_taurus
ENSKMAG00000008468	-	58	43.089	WBGene00017085	E01A2.2	87	38.353	Caenorhabditis_elegans
ENSKMAG00000008468	-	53	62.140	ENSCJAG00000014917	SRRT	93	54.009	Callithrix_jacchus
ENSKMAG00000008468	-	96	55.251	ENSCAFG00000023538	SRRT	93	53.664	Canis_familiaris
ENSKMAG00000008468	-	96	55.212	ENSCAFG00020013358	SRRT	97	52.751	Canis_lupus_dingo
ENSKMAG00000008468	-	53	61.934	ENSCHIG00000010495	SRRT	93	53.546	Capra_hircus
ENSKMAG00000008468	-	53	62.319	ENSTSYG00000036426	SRRT	59	60.792	Carlito_syrichta
ENSKMAG00000008468	-	53	63.025	ENSCAPG00000013586	SRRT	94	56.286	Cavia_aperea
ENSKMAG00000008468	-	53	62.012	ENSCPOG00000001739	SRRT	93	52.948	Cavia_porcellus
ENSKMAG00000008468	-	53	62.346	ENSCCAG00000015877	SRRT	93	54.064	Cebus_capucinus
ENSKMAG00000008468	-	53	62.346	ENSCATG00000036306	SRRT	94	53.279	Cercocebus_atys
ENSKMAG00000008468	-	96	53.281	ENSCLAG00000007568	SRRT	94	55.969	Chinchilla_lanigera
ENSKMAG00000008468	-	53	62.346	ENSCSAG00000017996	SRRT	93	53.901	Chlorocebus_sabaeus
ENSKMAG00000008468	-	69	59.535	ENSCPBG00000011553	SRRT	75	57.488	Chrysemys_picta_bellii
ENSKMAG00000008468	-	100	39.739	ENSCING00000003506	-	55	48.367	Ciona_intestinalis
ENSKMAG00000008468	-	100	39.286	ENSCSAVG00000008394	-	77	53.602	Ciona_savignyi
ENSKMAG00000008468	-	53	62.319	ENSCANG00000034556	SRRT	93	53.964	Colobus_angolensis_palliatus
ENSKMAG00000008468	-	96	56.028	ENSCGRG00001001594	Srrt	93	54.481	Cricetulus_griseus_chok1gshd
ENSKMAG00000008468	-	89	62.987	ENSCGRG00000007292	Srrt	94	56.725	Cricetulus_griseus_crigri
ENSKMAG00000008468	-	83	88.235	ENSCSEG00000005233	-	88	85.398	Cynoglossus_semilaevis
ENSKMAG00000008468	-	96	52.661	ENSCSEG00000017878	srrt	50	59.205	Cynoglossus_semilaevis
ENSKMAG00000008468	-	90	78.907	ENSCVAG00000017344	-	91	79.024	Cyprinodon_variegatus
ENSKMAG00000008468	-	94	56.465	ENSCVAG00000019848	srrt	55	64.509	Cyprinodon_variegatus
ENSKMAG00000008468	-	54	63.883	ENSDARG00000017762	srrt	52	63.673	Danio_rerio
ENSKMAG00000008468	-	53	62.346	ENSDNOG00000003851	SRRT	93	53.828	Dasypus_novemcinctus
ENSKMAG00000008468	-	96	55.916	ENSDORG00000005584	Srrt	94	58.103	Dipodomys_ordii
ENSKMAG00000008468	-	75	51.707	FBgn0033062	Ars2	56	51.288	Drosophila_melanogaster
ENSKMAG00000008468	-	75	59.919	ENSETEG00000016175	SRRT	63	70.769	Echinops_telfairi
ENSKMAG00000008468	-	63	58.859	ENSEBUG00000008517	-	77	58.316	Eptatretus_burgeri
ENSKMAG00000008468	-	96	55.287	ENSEASG00005016956	SRRT	93	53.254	Equus_asinus_asinus
ENSKMAG00000008468	-	96	55.287	ENSECAG00000012292	SRRT	93	53.254	Equus_caballus
ENSKMAG00000008468	-	80	65.385	ENSEEUG00000009117	SRRT	70	58.453	Erinaceus_europaeus
ENSKMAG00000008468	-	93	67.062	ENSELUG00000021216	-	93	65.610	Esox_lucius
ENSKMAG00000008468	-	96	55.402	ENSFCAG00000006855	SRRT	93	52.588	Felis_catus
ENSKMAG00000008468	-	53	60.127	ENSFDAG00000021347	SRRT	93	55.444	Fukomys_damarensis
ENSKMAG00000008468	-	54	77.572	ENSFHEG00000004105	-	96	76.955	Fundulus_heteroclitus
ENSKMAG00000008468	-	75	65.083	ENSFHEG00000002756	srrt	82	64.846	Fundulus_heteroclitus
ENSKMAG00000008468	-	96	53.846	ENSGMOG00000018619	srrt	51	61.474	Gadus_morhua
ENSKMAG00000008468	-	93	73.608	ENSGAFG00000020383	-	93	75.339	Gambusia_affinis
ENSKMAG00000008468	-	53	65.116	ENSGAFG00000005423	srrt	53	63.786	Gambusia_affinis
ENSKMAG00000008468	-	93	71.651	ENSGACG00000001100	-	93	71.362	Gasterosteus_aculeatus
ENSKMAG00000008468	-	96	55.204	ENSGACG00000020387	srrt	52	63.410	Gasterosteus_aculeatus
ENSKMAG00000008468	-	53	62.346	ENSGGOG00000001508	SRRT	93	53.974	Gorilla_gorilla
ENSKMAG00000008468	-	53	64.211	ENSHBUG00000002942	srrt	50	64.092	Haplochromis_burtoni
ENSKMAG00000008468	-	96	54.400	ENSHGLG00000008344	Srrt	94	55.773	Heterocephalus_glaber_female
ENSKMAG00000008468	-	96	55.006	ENSHGLG00100018857	Srrt	94	56.634	Heterocephalus_glaber_male
ENSKMAG00000008468	-	98	54.463	ENSHCOG00000005403	srrt	57	61.633	Hippocampus_comes
ENSKMAG00000008468	-	93	68.850	ENSHCOG00000008904	-	93	68.850	Hippocampus_comes
ENSKMAG00000008468	-	54	63.941	ENSIPUG00000021150	srrt	53	63.599	Ictalurus_punctatus
ENSKMAG00000008468	-	53	62.319	ENSSTOG00000013776	SRRT	93	53.563	Ictidomys_tridecemlineatus
ENSKMAG00000008468	-	96	54.879	ENSJJAG00000010446	Srrt	93	58.218	Jaculus_jaculus
ENSKMAG00000008468	-	79	65.957	ENSLBEG00000016308	srrt	78	63.825	Labrus_bergylta
ENSKMAG00000008468	-	65	74.419	ENSLBEG00000028983	-	97	72.990	Labrus_bergylta
ENSKMAG00000008468	-	94	46.071	ENSLACG00000001089	SRRT	51	49.894	Latimeria_chalumnae
ENSKMAG00000008468	-	77	66.875	ENSLOCG00000013658	srrt	72	68.345	Lepisosteus_oculatus
ENSKMAG00000008468	-	53	62.346	ENSLAFG00000007725	SRRT	93	53.791	Loxodonta_africana
ENSKMAG00000008468	-	53	62.319	ENSMFAG00000033745	SRRT	97	53.279	Macaca_fascicularis
ENSKMAG00000008468	-	53	62.346	ENSMMUG00000021255	SRRT	93	53.901	Macaca_mulatta
ENSKMAG00000008468	-	53	62.346	ENSMNEG00000041864	SRRT	94	53.279	Macaca_nemestrina
ENSKMAG00000008468	-	53	62.319	ENSMLEG00000029479	SRRT	95	53.279	Mandrillus_leucophaeus
ENSKMAG00000008468	-	98	81.439	ENSMAMG00000010681	-	93	81.941	Mastacembelus_armatus
ENSKMAG00000008468	-	53	63.214	ENSMAMG00000014311	srrt	52	63.598	Mastacembelus_armatus
ENSKMAG00000008468	-	53	64.211	ENSMZEG00005016135	srrt	50	64.092	Maylandia_zebra
ENSKMAG00000008468	-	93	81.045	ENSMZEG00005028002	-	93	81.288	Maylandia_zebra
ENSKMAG00000008468	-	96	55.069	ENSMAUG00000011386	Srrt	94	57.480	Mesocricetus_auratus
ENSKMAG00000008468	-	53	62.551	ENSMICG00000009471	SRRT	95	53.513	Microcebus_murinus
ENSKMAG00000008468	-	96	55.363	ENSMOCG00000001971	Srrt	94	57.874	Microtus_ochrogaster
ENSKMAG00000008468	-	84	74.459	ENSMMOG00000011137	-	88	72.377	Mola_mola
ENSKMAG00000008468	-	53	60.370	ENSMODG00000004862	SRRT	94	58.721	Monodelphis_domestica
ENSKMAG00000008468	-	65	61.639	ENSMALG00000005567	-	87	63.928	Monopterus_albus
ENSKMAG00000008468	-	88	53.043	ENSMALG00000018604	srrt	55	60.041	Monopterus_albus
ENSKMAG00000008468	-	96	55.814	MGP_CAROLIEiJ_G0027870	Srrt	93	61.508	Mus_caroli
ENSKMAG00000008468	-	96	55.814	ENSMUSG00000037364	Srrt	92	61.508	Mus_musculus
ENSKMAG00000008468	-	53	62.343	MGP_PahariEiJ_G0024456	Srrt	96	60.076	Mus_pahari
ENSKMAG00000008468	-	96	55.814	MGP_SPRETEiJ_G0028875	Srrt	93	61.508	Mus_spretus
ENSKMAG00000008468	-	96	55.696	ENSMPUG00000015839	SRRT	93	53.901	Mustela_putorius_furo
ENSKMAG00000008468	-	96	55.530	ENSMLUG00000009975	SRRT	93	53.719	Myotis_lucifugus
ENSKMAG00000008468	-	96	54.913	ENSNGAG00000023715	Srrt	100	53.806	Nannospalax_galili
ENSKMAG00000008468	-	53	63.713	ENSNBRG00000019100	srrt	52	64.226	Neolamprologus_brichardi
ENSKMAG00000008468	-	95	51.185	ENSNLEG00000011987	SRRT	97	47.821	Nomascus_leucogenys
ENSKMAG00000008468	-	94	46.737	ENSMEUG00000011941	SRRT	52	51.646	Notamacropus_eugenii
ENSKMAG00000008468	-	62	60.150	ENSOPRG00000002502	-	67	58.275	Ochotona_princeps
ENSKMAG00000008468	-	96	55.491	ENSODEG00000016856	SRRT	93	56.832	Octodon_degus
ENSKMAG00000008468	-	93	80.242	ENSONIG00000016080	-	93	81.939	Oreochromis_niloticus
ENSKMAG00000008468	-	53	64.632	ENSONIG00000004242	srrt	52	63.599	Oreochromis_niloticus
ENSKMAG00000008468	-	96	55.581	ENSORLG00000008120	srrt	52	64.718	Oryzias_latipes
ENSKMAG00000008468	-	96	55.645	ENSORLG00020003058	srrt	52	64.509	Oryzias_latipes_hni
ENSKMAG00000008468	-	96	55.466	ENSORLG00015008062	srrt	52	64.718	Oryzias_latipes_hsok
ENSKMAG00000008468	-	96	56.264	ENSOMEG00000003155	srrt	82	64.718	Oryzias_melastigma
ENSKMAG00000008468	-	98	77.843	ENSOMEG00000006963	-	93	76.876	Oryzias_melastigma
ENSKMAG00000008468	-	53	62.551	ENSOGAG00000017242	SRRT	93	54.255	Otolemur_garnettii
ENSKMAG00000008468	-	53	61.905	ENSOARG00000015645	SRRT	93	52.066	Ovis_aries
ENSKMAG00000008468	-	53	62.319	ENSPPAG00000041090	SRRT	93	53.800	Pan_paniscus
ENSKMAG00000008468	-	96	55.363	ENSPPRG00000009557	SRRT	93	52.538	Panthera_pardus
ENSKMAG00000008468	-	96	55.402	ENSPTIG00000014355	SRRT	93	52.588	Panthera_tigris_altaica
ENSKMAG00000008468	-	53	62.319	ENSPTRG00000019511	SRRT	98	51.756	Pan_troglodytes
ENSKMAG00000008468	-	53	61.134	ENSPANG00000020763	SRRT	94	53.279	Papio_anubis
ENSKMAG00000008468	-	96	55.944	ENSPKIG00000005434	srrt	55	63.450	Paramormyrops_kingsleyae
ENSKMAG00000008468	-	94	57.059	ENSPKIG00000022212	-	93	56.257	Paramormyrops_kingsleyae
ENSKMAG00000008468	-	53	62.105	ENSPSIG00000016311	SRRT	52	61.895	Pelodiscus_sinensis
ENSKMAG00000008468	-	96	55.128	ENSPMGG00000002841	srrt	56	62.397	Periophthalmus_magnuspinnatus
ENSKMAG00000008468	-	53	62.316	ENSPEMG00000010834	Srrt	93	57.426	Peromyscus_maniculatus_bairdii
ENSKMAG00000008468	-	96	48.917	ENSPMAG00000009614	-	56	55.865	Petromyzon_marinus
ENSKMAG00000008468	-	53	61.224	ENSPCIG00000000816	SRRT	93	53.286	Phascolarctos_cinereus
ENSKMAG00000008468	-	53	65.328	ENSPFOG00000005704	srrt	52	64.990	Poecilia_formosa
ENSKMAG00000008468	-	93	74.056	ENSPFOG00000016554	-	93	76.267	Poecilia_formosa
ENSKMAG00000008468	-	94	54.918	ENSPLAG00000021992	srrt	51	63.941	Poecilia_latipinna
ENSKMAG00000008468	-	93	73.934	ENSPLAG00000004526	-	93	74.663	Poecilia_latipinna
ENSKMAG00000008468	-	77	64.706	ENSPMEG00000001182	srrt	82	64.375	Poecilia_mexicana
ENSKMAG00000008468	-	90	73.651	ENSPMEG00000001520	-	90	76.852	Poecilia_mexicana
ENSKMAG00000008468	-	94	56.992	ENSPREG00000022308	srrt	54	64.358	Poecilia_reticulata
ENSKMAG00000008468	-	53	62.551	ENSPCOG00000025751	SRRT	93	54.137	Propithecus_coquereli
ENSKMAG00000008468	-	61	58.333	ENSPVAG00000000834	SRRT	100	45.619	Pteropus_vampyrus
ENSKMAG00000008468	-	53	64.211	ENSPNYG00000018710	srrt	52	64.092	Pundamilia_nyererei
ENSKMAG00000008468	-	74	62.264	ENSPNAG00000010629	srrt	68	58.209	Pygocentrus_nattereri
ENSKMAG00000008468	-	53	52.292	ENSRNOG00000048277	AABR07035787.1	97	52.087	Rattus_norvegicus
ENSKMAG00000008468	-	53	62.346	ENSRBIG00000035718	SRRT	94	53.279	Rhinopithecus_bieti
ENSKMAG00000008468	-	53	62.346	ENSRROG00000030622	SRRT	95	53.279	Rhinopithecus_roxellana
ENSKMAG00000008468	-	53	62.346	ENSSBOG00000033570	SRRT	94	53.910	Saimiri_boliviensis_boliviensis
ENSKMAG00000008468	-	72	52.537	ENSSHAG00000007349	-	77	60.904	Sarcophilus_harrisii
ENSKMAG00000008468	-	53	65.962	ENSSFOG00015017293	srrt	52	65.102	Scleropages_formosus
ENSKMAG00000008468	-	53	81.663	ENSSMAG00000018195	-	93	72.039	Scophthalmus_maximus
ENSKMAG00000008468	-	94	54.816	ENSSMAG00000015342	srrt	52	64.780	Scophthalmus_maximus
ENSKMAG00000008468	-	53	65.053	ENSSDUG00000012049	srrt	54	64.718	Seriola_dumerili
ENSKMAG00000008468	-	54	68.944	ENSSDUG00000002051	-	96	68.583	Seriola_dumerili
ENSKMAG00000008468	-	78	65.319	ENSSLDG00000017477	srrt	79	64.768	Seriola_lalandi_dorsalis
ENSKMAG00000008468	-	85	82.314	ENSSPAG00000018943	-	93	82.487	Stegastes_partitus
ENSKMAG00000008468	-	53	64.644	ENSSPAG00000005665	srrt	51	64.108	Stegastes_partitus
ENSKMAG00000008468	-	51	62.069	ENSSSCG00000024789	SRRT	98	53.230	Sus_scrofa
ENSKMAG00000008468	-	90	74.841	ENSTRUG00000000023	-	89	74.934	Takifugu_rubripes
ENSKMAG00000008468	-	96	54.650	ENSTRUG00000016075	srrt	93	53.919	Takifugu_rubripes
ENSKMAG00000008468	-	93	67.895	ENSTNIG00000003111	-	93	68.483	Tetraodon_nigroviridis
ENSKMAG00000008468	-	75	50.657	ENSTNIG00000011779	srrt	72	61.507	Tetraodon_nigroviridis
ENSKMAG00000008468	-	100	56.181	ENSTTRG00000011104	SRRT	93	53.184	Tursiops_truncatus
ENSKMAG00000008468	-	96	55.097	ENSUAMG00000027997	SRRT	95	52.297	Ursus_americanus
ENSKMAG00000008468	-	96	55.137	ENSUMAG00000011295	SRRT	93	53.901	Ursus_maritimus
ENSKMAG00000008468	-	96	55.251	ENSVVUG00000023572	SRRT	93	53.664	Vulpes_vulpes
ENSKMAG00000008468	-	71	58.958	ENSXETG00000025124	srrt	73	58.571	Xenopus_tropicalis
ENSKMAG00000008468	-	54	66.385	ENSXCOG00000013105	-	93	66.808	Xiphophorus_couchianus
ENSKMAG00000008468	-	98	76.588	ENSXMAG00000002090	-	93	76.449	Xiphophorus_maculatus
ENSKMAG00000008468	-	96	57.439	ENSXMAG00000007627	srrt	52	64.780	Xiphophorus_maculatus