EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000008516 (Gene tree)
Gene ID: 108244057
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 4090 bases
Position: chrLWHD01000130.1:973601-977690
Accession: 108244057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000011363	tRNA_Me_trans	PF03054.16	2e-133	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000011541	-	1921	XM_017429926	ENSKMAP00000011363	416 (aa)	XP_017285415	UPI0007F8E4A8

Gene Model

Click here to download ENSKMAG00000008516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000008516's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000008516	trmu	99	68.841	ENSG00000100416	TRMU	99	75.000	Homo_sapiens
ENSKMAG00000008516	trmu	100	84.892	ENSAPOG00000014458	trmu	100	84.892	Acanthochromis_polyacanthus
ENSKMAG00000008516	trmu	96	70.324	ENSAMEG00000003319	TRMU	96	70.324	Ailuropoda_melanoleuca
ENSKMAG00000008516	trmu	100	83.894	ENSACIG00000002101	trmu	100	83.894	Amphilophus_citrinellus
ENSKMAG00000008516	trmu	100	86.091	ENSAOCG00000013155	trmu	100	86.091	Amphiprion_ocellaris
ENSKMAG00000008516	trmu	100	85.851	ENSAPEG00000013350	trmu	100	85.851	Amphiprion_percula
ENSKMAG00000008516	trmu	100	84.615	ENSATEG00000007814	trmu	100	84.615	Anabas_testudineus
ENSKMAG00000008516	trmu	94	70.437	ENSAPLG00000016380	TRMU	99	70.437	Anas_platyrhynchos
ENSKMAG00000008516	trmu	99	70.290	ENSACAG00000007720	TRMU	99	70.290	Anolis_carolinensis
ENSKMAG00000008516	trmu	99	69.249	ENSANAG00000038053	TRMU	98	69.249	Aotus_nancymaae
ENSKMAG00000008516	trmu	100	85.337	ENSACLG00000005395	trmu	100	85.337	Astatotilapia_calliptera
ENSKMAG00000008516	trmu	99	75.854	ENSAMXG00000005282	trmu	99	75.854	Astyanax_mexicanus
ENSKMAG00000008516	trmu	99	69.880	ENSBTAG00000005595	TRMU	99	69.880	Bos_taurus
ENSKMAG00000008516	trmu	91	40.769	WBGene00007114	mttu-1	98	40.769	Caenorhabditis_elegans
ENSKMAG00000008516	trmu	99	67.229	ENSCJAG00000000198	TRMU	99	67.229	Callithrix_jacchus
ENSKMAG00000008516	trmu	100	68.990	ENSCAFG00000000779	TRMU	98	69.305	Canis_familiaris
ENSKMAG00000008516	trmu	100	68.990	ENSCAFG00020009184	TRMU	98	69.305	Canis_lupus_dingo
ENSKMAG00000008516	trmu	100	69.305	ENSCHIG00000017074	TRMU	100	69.305	Capra_hircus
ENSKMAG00000008516	trmu	96	71.250	ENSTSYG00000003853	TRMU	95	71.250	Carlito_syrichta
ENSKMAG00000008516	trmu	94	66.015	ENSCAPG00000013034	TRMU	96	66.015	Cavia_aperea
ENSKMAG00000008516	trmu	97	70.223	ENSCPOG00000020780	TRMU	96	70.223	Cavia_porcellus
ENSKMAG00000008516	trmu	99	67.797	ENSCCAG00000021641	TRMU	98	67.797	Cebus_capucinus
ENSKMAG00000008516	trmu	96	70.175	ENSCATG00000032800	TRMU	95	70.175	Cercocebus_atys
ENSKMAG00000008516	trmu	98	70.098	ENSCLAG00000017269	TRMU	97	70.098	Chinchilla_lanigera
ENSKMAG00000008516	trmu	99	68.510	ENSCSAG00000005279	TRMU	99	68.510	Chlorocebus_sabaeus
ENSKMAG00000008516	trmu	94	69.309	ENSCPBG00000011621	TRMU	98	69.309	Chrysemys_picta_bellii
ENSKMAG00000008516	trmu	93	47.423	ENSCING00000019371	-	95	47.423	Ciona_intestinalis
ENSKMAG00000008516	trmu	99	68.841	ENSCANG00000041645	TRMU	98	68.841	Colobus_angolensis_palliatus
ENSKMAG00000008516	trmu	99	67.866	ENSCGRG00001001739	Trmu	99	67.866	Cricetulus_griseus_chok1gshd
ENSKMAG00000008516	trmu	99	62.830	ENSCGRG00000002781	Trmu	100	62.830	Cricetulus_griseus_crigri
ENSKMAG00000008516	trmu	99	80.676	ENSCSEG00000012382	trmu	99	80.676	Cynoglossus_semilaevis
ENSKMAG00000008516	trmu	100	85.577	ENSCVAG00000001366	trmu	100	85.577	Cyprinodon_variegatus
ENSKMAG00000008516	trmu	100	73.317	ENSDARG00000043734	trmu	100	73.317	Danio_rerio
ENSKMAG00000008516	trmu	64	56.134	ENSDNOG00000047245	-	84	61.088	Dasypus_novemcinctus
ENSKMAG00000008516	trmu	96	70.750	ENSDORG00000007455	Trmu	97	70.750	Dipodomys_ordii
ENSKMAG00000008516	trmu	93	45.337	FBgn0040337	CG3021	95	45.337	Drosophila_melanogaster
ENSKMAG00000008516	trmu	95	54.750	ENSEBUG00000007454	trmu	100	53.890	Eptatretus_burgeri
ENSKMAG00000008516	trmu	97	69.877	ENSEASG00005021725	TRMU	99	69.065	Equus_asinus_asinus
ENSKMAG00000008516	trmu	97	69.877	ENSECAG00000000467	TRMU	99	69.065	Equus_caballus
ENSKMAG00000008516	trmu	69	52.098	ENSEEUG00000000074	-	68	52.098	Erinaceus_europaeus
ENSKMAG00000008516	trmu	100	78.177	ENSELUG00000009464	trmu	99	80.435	Esox_lucius
ENSKMAG00000008516	trmu	97	70.864	ENSFCAG00000006533	TRMU	98	69.952	Felis_catus
ENSKMAG00000008516	trmu	94	70.025	ENSFALG00000010035	TRMU	100	70.025	Ficedula_albicollis
ENSKMAG00000008516	trmu	91	68.947	ENSFDAG00000017472	TRMU	97	68.947	Fukomys_damarensis
ENSKMAG00000008516	trmu	100	85.817	ENSFHEG00000003162	trmu	100	85.817	Fundulus_heteroclitus
ENSKMAG00000008516	trmu	97	70.762	ENSGMOG00000001323	trmu	100	70.762	Gadus_morhua
ENSKMAG00000008516	trmu	99	69.762	ENSGALG00000031922	TRMU	99	69.762	Gallus_gallus
ENSKMAG00000008516	trmu	98	85.819	ENSGAFG00000013331	trmu	98	85.819	Gambusia_affinis
ENSKMAG00000008516	trmu	100	81.797	ENSGACG00000019024	trmu	100	81.797	Gasterosteus_aculeatus
ENSKMAG00000008516	trmu	99	69.082	ENSGGOG00000000203	TRMU	98	69.082	Gorilla_gorilla
ENSKMAG00000008516	trmu	100	85.337	ENSHBUG00000023421	trmu	100	85.337	Haplochromis_burtoni
ENSKMAG00000008516	trmu	99	68.029	ENSHGLG00000009278	TRMU	99	68.029	Heterocephalus_glaber_female
ENSKMAG00000008516	trmu	99	68.029	ENSHGLG00100018863	TRMU	99	68.029	Heterocephalus_glaber_male
ENSKMAG00000008516	trmu	99	82.367	ENSHCOG00000013459	trmu	99	82.367	Hippocampus_comes
ENSKMAG00000008516	trmu	97	78.713	ENSIPUG00000009785	trmu	99	78.713	Ictalurus_punctatus
ENSKMAG00000008516	trmu	99	69.231	ENSSTOG00000010993	TRMU	99	69.231	Ictidomys_tridecemlineatus
ENSKMAG00000008516	trmu	99	68.106	ENSJJAG00000000667	Trmu	100	68.106	Jaculus_jaculus
ENSKMAG00000008516	trmu	100	83.413	ENSLBEG00000018831	trmu	100	83.413	Labrus_bergylta
ENSKMAG00000008516	trmu	99	74.038	ENSLACG00000013713	TRMU	99	74.038	Latimeria_chalumnae
ENSKMAG00000008516	trmu	96	81.203	ENSLOCG00000016066	trmu	95	81.203	Lepisosteus_oculatus
ENSKMAG00000008516	trmu	99	60.621	ENSLAFG00000005129	TRMU	99	60.621	Loxodonta_africana
ENSKMAG00000008516	trmu	99	68.510	ENSMFAG00000039767	TRMU	99	68.510	Macaca_fascicularis
ENSKMAG00000008516	trmu	99	68.510	ENSMMUG00000000807	TRMU	99	68.510	Macaca_mulatta
ENSKMAG00000008516	trmu	99	68.510	ENSMNEG00000028164	TRMU	99	68.510	Macaca_nemestrina
ENSKMAG00000008516	trmu	96	70.175	ENSMLEG00000033884	TRMU	95	70.175	Mandrillus_leucophaeus
ENSKMAG00000008516	trmu	100	84.615	ENSMAMG00000004717	trmu	100	84.615	Mastacembelus_armatus
ENSKMAG00000008516	trmu	100	85.337	ENSMZEG00005015797	trmu	100	85.337	Maylandia_zebra
ENSKMAG00000008516	trmu	81	68.513	ENSMGAG00000007550	TRMU	100	68.513	Meleagris_gallopavo
ENSKMAG00000008516	trmu	99	67.386	ENSMAUG00000022282	Trmu	100	67.386	Mesocricetus_auratus
ENSKMAG00000008516	trmu	96	69.750	ENSMICG00000029046	TRMU	97	69.750	Microcebus_murinus
ENSKMAG00000008516	trmu	99	67.386	ENSMOCG00000014641	Trmu	100	67.386	Microtus_ochrogaster
ENSKMAG00000008516	trmu	100	81.010	ENSMMOG00000007229	trmu	100	81.010	Mola_mola
ENSKMAG00000008516	trmu	97	66.339	ENSMODG00000007433	TRMU	95	66.339	Monodelphis_domestica
ENSKMAG00000008516	trmu	100	84.375	ENSMALG00000007721	trmu	100	84.375	Monopterus_albus
ENSKMAG00000008516	trmu	100	67.386	MGP_CAROLIEiJ_G0020134	Trmu	100	67.386	Mus_caroli
ENSKMAG00000008516	trmu	100	67.866	ENSMUSG00000022386	Trmu	100	67.866	Mus_musculus
ENSKMAG00000008516	trmu	100	67.626	MGP_PahariEiJ_G0020139	Trmu	100	67.626	Mus_pahari
ENSKMAG00000008516	trmu	100	67.866	MGP_SPRETEiJ_G0021031	Trmu	100	67.866	Mus_spretus
ENSKMAG00000008516	trmu	99	68.990	ENSMPUG00000002523	TRMU	99	68.990	Mustela_putorius_furo
ENSKMAG00000008516	trmu	99	68.841	ENSNGAG00000005132	Trmu	99	68.841	Nannospalax_galili
ENSKMAG00000008516	trmu	100	84.856	ENSNBRG00000022690	trmu	100	84.856	Neolamprologus_brichardi
ENSKMAG00000008516	trmu	99	68.990	ENSNLEG00000015773	TRMU	99	68.990	Nomascus_leucogenys
ENSKMAG00000008516	trmu	79	58.410	ENSMEUG00000000216	TRMU	99	58.410	Notamacropus_eugenii
ENSKMAG00000008516	trmu	99	68.825	ENSODEG00000014745	TRMU	100	68.825	Octodon_degus
ENSKMAG00000008516	trmu	100	85.096	ENSONIG00000009821	trmu	100	85.096	Oreochromis_niloticus
ENSKMAG00000008516	trmu	94	65.217	ENSOANG00000001891	TRMU	99	65.217	Ornithorhynchus_anatinus
ENSKMAG00000008516	trmu	90	71.314	ENSOCUG00000003664	TRMU	94	70.077	Oryctolagus_cuniculus
ENSKMAG00000008516	trmu	99	81.446	ENSORLG00000019015	trmu	99	81.446	Oryzias_latipes
ENSKMAG00000008516	trmu	99	81.687	ENSORLG00020006830	trmu	99	81.687	Oryzias_latipes_hni
ENSKMAG00000008516	trmu	99	81.687	ENSORLG00015003907	trmu	99	81.687	Oryzias_latipes_hsok
ENSKMAG00000008516	trmu	58	83.058	ENSOMEG00000015541	trmu	86	83.058	Oryzias_melastigma
ENSKMAG00000008516	trmu	99	68.510	ENSOGAG00000008096	TRMU	99	68.510	Otolemur_garnettii
ENSKMAG00000008516	trmu	91	68.684	ENSOARG00000019475	TRMU	93	68.684	Ovis_aries
ENSKMAG00000008516	trmu	99	68.841	ENSPPAG00000033944	TRMU	98	68.841	Pan_paniscus
ENSKMAG00000008516	trmu	97	70.617	ENSPPRG00000004197	TRMU	98	69.471	Panthera_pardus
ENSKMAG00000008516	trmu	67	72.563	ENSPTIG00000014122	TRMU	97	74.621	Panthera_tigris_altaica
ENSKMAG00000008516	trmu	99	68.841	ENSPTRG00000014510	TRMU	98	68.841	Pan_troglodytes
ENSKMAG00000008516	trmu	95	70.633	ENSPANG00000023074	TRMU	97	67.671	Papio_anubis
ENSKMAG00000008516	trmu	100	75.240	ENSPKIG00000002849	trmu	100	75.240	Paramormyrops_kingsleyae
ENSKMAG00000008516	trmu	92	70.235	ENSPSIG00000013020	TRMU	100	70.235	Pelodiscus_sinensis
ENSKMAG00000008516	trmu	100	80.769	ENSPMGG00000004083	trmu	100	80.769	Periophthalmus_magnuspinnatus
ENSKMAG00000008516	trmu	99	67.866	ENSPEMG00000014007	Trmu	100	67.866	Peromyscus_maniculatus_bairdii
ENSKMAG00000008516	trmu	96	65.750	ENSPCIG00000009923	TRMU	97	64.819	Phascolarctos_cinereus
ENSKMAG00000008516	trmu	97	80.941	ENSPFOG00000008197	trmu	90	80.941	Poecilia_formosa
ENSKMAG00000008516	trmu	99	85.024	ENSPLAG00000008414	trmu	99	85.024	Poecilia_latipinna
ENSKMAG00000008516	trmu	100	85.096	ENSPMEG00000004326	trmu	100	85.096	Poecilia_mexicana
ENSKMAG00000008516	trmu	99	84.819	ENSPREG00000007980	trmu	99	84.819	Poecilia_reticulata
ENSKMAG00000008516	trmu	99	69.324	ENSPPYG00000011949	TRMU	98	69.324	Pongo_abelii
ENSKMAG00000008516	trmu	93	62.629	ENSPCAG00000013462	TRMU	99	62.629	Procavia_capensis
ENSKMAG00000008516	trmu	96	69.500	ENSPCOG00000016539	TRMU	96	69.500	Propithecus_coquereli
ENSKMAG00000008516	trmu	97	63.457	ENSPVAG00000013202	TRMU	99	62.981	Pteropus_vampyrus
ENSKMAG00000008516	trmu	100	84.856	ENSPNYG00000005629	trmu	100	84.856	Pundamilia_nyererei
ENSKMAG00000008516	trmu	99	77.129	ENSPNAG00000006339	trmu	96	77.129	Pygocentrus_nattereri
ENSKMAG00000008516	trmu	100	67.386	ENSRNOG00000016465	Trmu	100	67.386	Rattus_norvegicus
ENSKMAG00000008516	trmu	99	68.029	ENSRBIG00000038973	TRMU	99	68.029	Rhinopithecus_bieti
ENSKMAG00000008516	trmu	99	68.269	ENSRROG00000004267	TRMU	99	68.269	Rhinopithecus_roxellana
ENSKMAG00000008516	trmu	93	33.007	YDL033C	SLM3	93	33.007	Saccharomyces_cerevisiae
ENSKMAG00000008516	trmu	99	68.434	ENSSBOG00000030184	TRMU	99	68.434	Saimiri_boliviensis_boliviensis
ENSKMAG00000008516	trmu	91	74.670	ENSSFOG00015020664	trmu	99	74.670	Scleropages_formosus
ENSKMAG00000008516	trmu	100	83.654	ENSSMAG00000019450	trmu	100	83.654	Scophthalmus_maximus
ENSKMAG00000008516	trmu	100	84.856	ENSSDUG00000011913	trmu	100	84.856	Seriola_dumerili
ENSKMAG00000008516	trmu	100	84.856	ENSSLDG00000011684	trmu	100	84.856	Seriola_lalandi_dorsalis
ENSKMAG00000008516	trmu	99	59.662	ENSSPUG00000017123	TRMU	98	59.662	Sphenodon_punctatus
ENSKMAG00000008516	trmu	100	83.894	ENSSPAG00000021875	trmu	100	83.894	Stegastes_partitus
ENSKMAG00000008516	trmu	97	69.136	ENSSSCG00000000007	TRMU	99	68.258	Sus_scrofa
ENSKMAG00000008516	trmu	89	73.458	ENSTGUG00000003663	-	100	73.458	Taeniopygia_guttata
ENSKMAG00000008516	trmu	99	83.293	ENSTRUG00000001231	trmu	100	83.293	Takifugu_rubripes
ENSKMAG00000008516	trmu	99	82.734	ENSTNIG00000010484	trmu	98	82.734	Tetraodon_nigroviridis
ENSKMAG00000008516	trmu	72	55.000	ENSTBEG00000011276	-	77	55.000	Tupaia_belangeri
ENSKMAG00000008516	trmu	96	71.429	ENSTTRG00000004160	TRMU	95	71.429	Tursiops_truncatus
ENSKMAG00000008516	trmu	70	74.570	ENSUAMG00000024825	TRMU	97	74.570	Ursus_americanus
ENSKMAG00000008516	trmu	95	58.942	ENSUMAG00000019079	TRMU	97	74.609	Ursus_maritimus
ENSKMAG00000008516	trmu	53	63.927	ENSVPAG00000000685	-	100	63.927	Vicugna_pacos
ENSKMAG00000008516	trmu	100	68.510	ENSVVUG00000024963	TRMU	98	68.510	Vulpes_vulpes
ENSKMAG00000008516	trmu	97	74.631	ENSXETG00000023304	trmu	95	74.631	Xenopus_tropicalis
ENSKMAG00000008516	trmu	99	83.493	ENSXCOG00000015105	trmu	99	83.493	Xiphophorus_couchianus
ENSKMAG00000008516	trmu	99	85.542	ENSXMAG00000006697	trmu	99	85.542	Xiphophorus_maculatus