EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000008813 (Gene tree)
Gene ID: 108230479
Gene Symbol: pan3
Alias: zgc:171628
Full Name: poly(A) specific ribonuclease subunit PAN3
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 16374 bases
Position: chrLWHD01000008.1:1994598-2010971
Accession: 108230479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000011755	zf-CCCH	PF00642.24	0.00024	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000011934	-	5020	XM_017406759	ENSKMAP00000011755	791 (aa)	XP_017262248	UPI0007F91624

Gene Model

Click here to download ENSKMAG00000008813's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000008813's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000008813	pan3	99	83.147	ENSELUG00000014375	pan3	99	83.147	Esox_lucius
ENSKMAG00000008813	pan3	100	70.210	ENSLACG00000017156	PAN3	100	71.744	Latimeria_chalumnae
ENSKMAG00000008813	pan3	100	90.852	ENSORLG00000008758	pan3	100	90.852	Oryzias_latipes
ENSKMAG00000008813	pan3	100	86.842	ENSORLG00015014393	pan3	100	86.842	Oryzias_latipes_hsok
ENSKMAG00000008813	pan3	100	85.589	ENSOMEG00000007798	pan3	100	85.589	Oryzias_melastigma
ENSKMAG00000008813	pan3	74	74.749	ENSPKIG00000008329	-	96	74.749	Paramormyrops_kingsleyae
ENSKMAG00000008813	pan3	97	66.412	ENSPMAG00000002383	pan3	100	66.285	Petromyzon_marinus
ENSKMAG00000008813	pan3	100	91.489	ENSPREG00000019582	pan3	100	90.977	Poecilia_reticulata
ENSKMAG00000008813	pan3	100	93.985	ENSSMAG00000014517	pan3	98	93.860	Scophthalmus_maximus
ENSKMAG00000008813	pan3	100	77.475	ENSXETG00000011794	pan3	100	76.658	Xenopus_tropicalis