EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000008864 (Gene tree)
Gene ID: 108251754
Gene Symbol: -
Alias: -
Full Name: ADP ribosylation factor 5
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 4027 bases
Position: chrLWHD01001023.1:19150-23176
Accession: 108251754
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000011795	MMR_HSR1	PF01926.23	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000011975	-	1154	-	ENSKMAP00000011795	169 (aa)	-	-
ENSKMAT00000011966	-	462	XM_017442167	ENSKMAP00000011786	153 (aa)	XP_017297656	-

Gene Model

Click here to download ENSKMAG00000008864's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000008864's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000008864	-	96	44.444	ENSKMAG00000013576	arl8	90	44.444
ENSKMAG00000008864	-	88	32.000	ENSKMAG00000002898	arl8a	80	32.000
ENSKMAG00000008864	-	78	51.128	ENSKMAG00000020389	-	64	51.128
ENSKMAG00000008864	-	81	49.275	ENSKMAG00000007118	arl2	74	49.275
ENSKMAG00000008864	-	78	33.588	ENSKMAG00000014875	-	78	33.663
ENSKMAG00000008864	-	80	39.041	ENSKMAG00000016837	arfrp1	71	39.041
ENSKMAG00000008864	-	85	37.908	ENSKMAG00000000815	-	79	37.908
ENSKMAG00000008864	-	78	47.059	ENSKMAG00000020210	arl4aa	70	47.059
ENSKMAG00000008864	-	90	92.763	ENSKMAG00000012816	-	84	92.763
ENSKMAG00000008864	-	83	33.099	ENSKMAG00000018006	sar1ab	72	33.099
ENSKMAG00000008864	-	79	47.445	ENSKMAG00000010409	arl14	68	47.445
ENSKMAG00000008864	-	88	85.235	ENSKMAG00000018315	-	83	85.235
ENSKMAG00000008864	-	86	46.259	ENSKMAG00000004435	arl3l2	79	46.259
ENSKMAG00000008864	-	87	44.898	ENSKMAG00000009772	arl3	81	44.898
ENSKMAG00000008864	-	67	30.081	ENSKMAG00000006810	rab1ba	58	30.081
ENSKMAG00000008864	-	89	45.513	ENSKMAG00000011334	arl4cb	81	45.513
ENSKMAG00000008864	-	85	37.500	ENSKMAG00000000362	ARL6	82	37.500
ENSKMAG00000008864	-	88	34.000	ENSKMAG00000006196	arl8ba	81	34.000
ENSKMAG00000008864	-	96	43.827	ENSKMAG00000005826	ARL5A	90	43.827
ENSKMAG00000008864	-	81	48.175	ENSKMAG00000017791	-	82	45.638
ENSKMAG00000008864	-	90	85.526	ENSKMAG00000007316	arf2b	84	85.526
ENSKMAG00000008864	-	79	44.030	ENSKMAG00000001256	arl11	64	44.030
ENSKMAG00000008864	-	79	31.579	ENSKMAG00000019693	sar1b	67	31.579
ENSKMAG00000008864	-	90	83.553	ENSKMAG00000021494	-	84	83.553
ENSKMAG00000008864	-	90	83.553	ENSKMAG00000019525	arf3b	84	83.553
ENSKMAG00000008864	-	79	61.940	ENSKMAG00000005931	arl1	72	61.940
ENSKMAG00000008864	-	88	33.333	ENSKMAG00000020329	arl8bb	81	33.333
ENSKMAG00000008864	-	96	42.593	ENSKMAG00000011323	arl5c	90	42.593
ENSKMAG00000008864	-	90	84.868	ENSKMAG00000004334	-	84	84.868

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000008864	-	91	91.503	ENSCAFG00000001726	ARF5	84	91.447	Canis_familiaris
ENSKMAG00000008864	-	94	91.195	ENSELUG00000019582	-	84	93.377	Esox_lucius
ENSKMAG00000008864	-	90	91.447	ENSGALG00000043476	-	100	91.447	Gallus_gallus
ENSKMAG00000008864	-	91	78.431	ENSLACG00000012168	-	97	78.431	Latimeria_chalumnae
ENSKMAG00000008864	-	78	92.424	ENSMGAG00000008562	-	100	92.424	Meleagris_gallopavo
ENSKMAG00000008864	-	94	96.855	ENSORLG00020003354	-	94	96.855	Oryzias_latipes_hni
ENSKMAG00000008864	-	94	96.226	ENSORLG00015002471	-	79	96.226	Oryzias_latipes_hsok
ENSKMAG00000008864	-	79	79.259	ENSPMAG00000005571	-	100	79.259	Petromyzon_marinus
ENSKMAG00000008864	-	95	88.415	ENSSDUG00000014675	-	91	88.415	Seriola_dumerili
ENSKMAG00000008864	-	66	95.495	ENSSLDG00000005491	-	98	95.495	Seriola_lalandi_dorsalis
ENSKMAG00000008864	-	91	91.558	ENSSPUG00000004465	-	86	91.558	Sphenodon_punctatus
ENSKMAG00000008864	-	90	88.816	ENSTBEG00000007415	-	100	88.816	Tupaia_belangeri