EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000008912 (Gene tree)
Gene ID: 108243004
Gene Symbol: alyref
Alias: tho4|thoc4|zgc:171753
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 4062 bases
Position: chrLWHD01000109.1:1085366-1089427
Accession: 108243004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000011844	RRM_1	PF00076.22	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000012024	-	1768	XM_017428179	ENSKMAP00000011844	273 (aa)	XP_017283668	UPI0007F8A7FC

Gene Model

Click here to download ENSKMAG00000008912's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03013	RNA transport	KEGG
kmr03015	mRNA surveillance pathway	KEGG
kmr03040	Spliceosome	KEGG
kmr05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000008912's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000008912	alyref	100	53.261	ENSKMAG00000006462	-	100	51.449

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000008912	alyref	100	53.430	ENSAPOG00000000183	-	100	52.899	Acanthochromis_polyacanthus
ENSKMAG00000008912	alyref	100	52.098	ENSACIG00000020351	-	100	51.042	Amphilophus_citrinellus
ENSKMAG00000008912	alyref	99	77.574	ENSACIG00000006351	alyref	98	75.547	Amphilophus_citrinellus
ENSKMAG00000008912	alyref	100	53.069	ENSAOCG00000019305	-	100	50.725	Amphiprion_ocellaris
ENSKMAG00000008912	alyref	100	85.036	ENSAOCG00000014012	alyref	100	85.401	Amphiprion_ocellaris
ENSKMAG00000008912	alyref	100	54.513	ENSAPEG00000013527	-	100	50.362	Amphiprion_percula
ENSKMAG00000008912	alyref	100	85.036	ENSAPEG00000014603	alyref	100	85.401	Amphiprion_percula
ENSKMAG00000008912	alyref	100	56.272	ENSATEG00000000382	-	100	53.597	Anabas_testudineus
ENSKMAG00000008912	alyref	100	76.344	ENSATEG00000004307	alyref	100	82.437	Anabas_testudineus
ENSKMAG00000008912	alyref	50	74.101	ENSAPLG00000014745	-	100	72.535	Anas_platyrhynchos
ENSKMAG00000008912	alyref	100	56.228	ENSACLG00000010184	-	100	53.381	Astatotilapia_calliptera
ENSKMAG00000008912	alyref	100	81.818	ENSACLG00000008432	alyref	100	80.364	Astatotilapia_calliptera
ENSKMAG00000008912	alyref	100	75.357	ENSAMXG00000007359	alyref	100	76.157	Astyanax_mexicanus
ENSKMAG00000008912	alyref	99	47.826	ENSCING00000013568	-	99	45.936	Ciona_intestinalis
ENSKMAG00000008912	alyref	99	45.091	ENSCSAVG00000003324	-	99	42.958	Ciona_savignyi
ENSKMAG00000008912	alyref	100	80.072	ENSCSEG00000017800	alyref	100	82.909	Cynoglossus_semilaevis
ENSKMAG00000008912	alyref	100	81.685	ENSCVAG00000014869	alyref	100	80.657	Cyprinodon_variegatus
ENSKMAG00000008912	alyref	100	47.653	ENSCVAG00000007789	-	100	46.739	Cyprinodon_variegatus
ENSKMAG00000008912	alyref	100	81.979	ENSDARG00000077732	alyref	100	76.868	Danio_rerio
ENSKMAG00000008912	alyref	97	44.444	FBgn0010774	Ref1	65	50.276	Drosophila_melanogaster
ENSKMAG00000008912	alyref	99	51.111	ENSEBUG00000008253	alyref	95	49.640	Eptatretus_burgeri
ENSKMAG00000008912	alyref	71	47.500	ENSEBUG00000006305	alyref	85	42.925	Eptatretus_burgeri
ENSKMAG00000008912	alyref	100	69.149	ENSELUG00000008849	-	100	68.571	Esox_lucius
ENSKMAG00000008912	alyref	100	78.261	ENSELUG00000017178	alyref	100	73.551	Esox_lucius
ENSKMAG00000008912	alyref	58	76.543	ENSFALG00000011923	-	99	74.847	Ficedula_albicollis
ENSKMAG00000008912	alyref	100	49.104	ENSFHEG00000004698	-	100	47.101	Fundulus_heteroclitus
ENSKMAG00000008912	alyref	100	83.150	ENSFHEG00000019426	alyref	100	83.516	Fundulus_heteroclitus
ENSKMAG00000008912	alyref	100	72.727	ENSGMOG00000009882	alyref	100	69.455	Gadus_morhua
ENSKMAG00000008912	alyref	69	58.549	ENSGMOG00000013122	-	100	57.513	Gadus_morhua
ENSKMAG00000008912	alyref	100	80.072	ENSGAFG00000006014	alyref	100	78.261	Gambusia_affinis
ENSKMAG00000008912	alyref	100	48.188	ENSGAFG00000007573	-	100	47.464	Gambusia_affinis
ENSKMAG00000008912	alyref	100	81.818	ENSHBUG00000020196	alyref	100	80.364	Haplochromis_burtoni
ENSKMAG00000008912	alyref	100	56.429	ENSHBUG00000001454	-	100	55.124	Haplochromis_burtoni
ENSKMAG00000008912	alyref	98	50.368	ENSHCOG00000012825	-	94	48.529	Hippocampus_comes
ENSKMAG00000008912	alyref	100	75.451	ENSIPUG00000009469	alyref	100	73.285	Ictalurus_punctatus
ENSKMAG00000008912	alyref	73	65.025	ENSSTOG00000016570	-	99	65.049	Ictidomys_tridecemlineatus
ENSKMAG00000008912	alyref	100	46.711	ENSLBEG00000005387	-	66	51.256	Labrus_bergylta
ENSKMAG00000008912	alyref	99	49.462	ENSLBEG00000012930	-	99	46.182	Labrus_bergylta
ENSKMAG00000008912	alyref	100	78.853	ENSLBEG00000023118	alyref	90	79.422	Labrus_bergylta
ENSKMAG00000008912	alyref	78	73.272	ENSLOCG00000013879	alyref	87	74.528	Lepisosteus_oculatus
ENSKMAG00000008912	alyref	100	52.878	ENSMAMG00000005464	-	100	49.281	Mastacembelus_armatus
ENSKMAG00000008912	alyref	100	84.727	ENSMAMG00000003034	alyref	100	81.522	Mastacembelus_armatus
ENSKMAG00000008912	alyref	100	81.818	ENSMZEG00005008639	alyref	100	80.364	Maylandia_zebra
ENSKMAG00000008912	alyref	100	56.383	ENSMZEG00005012096	-	100	53.025	Maylandia_zebra
ENSKMAG00000008912	alyref	99	83.333	ENSMMOG00000012458	alyref	97	79.853	Mola_mola
ENSKMAG00000008912	alyref	99	48.162	ENSMMOG00000007032	-	98	40.278	Mola_mola
ENSKMAG00000008912	alyref	100	52.249	ENSMALG00000006054	-	100	50.883	Monopterus_albus
ENSKMAG00000008912	alyref	98	54.945	ENSMLUG00000009247	-	74	59.512	Myotis_lucifugus
ENSKMAG00000008912	alyref	100	58.929	ENSMLUG00000014372	-	100	57.348	Myotis_lucifugus
ENSKMAG00000008912	alyref	98	57.246	ENSMLUG00000030671	-	71	58.333	Myotis_lucifugus
ENSKMAG00000008912	alyref	100	57.092	ENSMLUG00000006521	-	100	57.401	Myotis_lucifugus
ENSKMAG00000008912	alyref	98	56.786	ENSMLUG00000022467	-	98	53.214	Myotis_lucifugus
ENSKMAG00000008912	alyref	98	55.396	ENSMLUG00000028605	-	98	56.475	Myotis_lucifugus
ENSKMAG00000008912	alyref	100	60.073	ENSMLUG00000004098	-	100	58.974	Myotis_lucifugus
ENSKMAG00000008912	alyref	98	55.351	ENSMLUG00000022178	-	98	54.613	Myotis_lucifugus
ENSKMAG00000008912	alyref	100	70.803	ENSNGAG00000022014	-	100	68.498	Nannospalax_galili
ENSKMAG00000008912	alyref	100	81.159	ENSNBRG00000001747	alyref	100	81.159	Neolamprologus_brichardi
ENSKMAG00000008912	alyref	100	56.989	ENSNBRG00000017460	-	100	54.122	Neolamprologus_brichardi
ENSKMAG00000008912	alyref	100	57.971	ENSONIG00000003296	-	100	56.159	Oreochromis_niloticus
ENSKMAG00000008912	alyref	100	83.154	ENSONIG00000019434	alyref	100	81.362	Oreochromis_niloticus
ENSKMAG00000008912	alyref	99	42.405	ENSORLG00000001620	-	58	47.887	Oryzias_latipes
ENSKMAG00000008912	alyref	100	81.387	ENSORLG00020011942	alyref	100	79.927	Oryzias_latipes_hni
ENSKMAG00000008912	alyref	100	50.000	ENSORLG00020015673	-	99	48.727	Oryzias_latipes_hni
ENSKMAG00000008912	alyref	100	50.903	ENSORLG00015015143	-	99	45.918	Oryzias_latipes_hsok
ENSKMAG00000008912	alyref	100	85.714	ENSORLG00015022664	alyref	100	80.952	Oryzias_latipes_hsok
ENSKMAG00000008912	alyref	99	50.719	ENSOMEG00000007158	-	97	45.455	Oryzias_melastigma
ENSKMAG00000008912	alyref	100	84.615	ENSOMEG00000019176	alyref	100	83.883	Oryzias_melastigma
ENSKMAG00000008912	alyref	71	74.611	ENSPPAG00000036403	-	73	70.936	Pan_paniscus
ENSKMAG00000008912	alyref	100	74.182	ENSPKIG00000007070	alyref	100	73.285	Paramormyrops_kingsleyae
ENSKMAG00000008912	alyref	99	72.464	ENSPKIG00000006233	-	80	69.597	Paramormyrops_kingsleyae
ENSKMAG00000008912	alyref	99	80.741	ENSPMGG00000016600	alyref	91	81.319	Periophthalmus_magnuspinnatus
ENSKMAG00000008912	alyref	72	48.731	ENSPMGG00000012994	-	99	46.667	Periophthalmus_magnuspinnatus
ENSKMAG00000008912	alyref	100	66.667	ENSPEMG00000016628	-	100	64.469	Peromyscus_maniculatus_bairdii
ENSKMAG00000008912	alyref	100	79.061	ENSPFOG00000022825	alyref	99	77.978	Poecilia_formosa
ENSKMAG00000008912	alyref	100	46.429	ENSPFOG00000017094	-	100	46.014	Poecilia_formosa
ENSKMAG00000008912	alyref	100	79.348	ENSPLAG00000006948	alyref	100	77.899	Poecilia_latipinna
ENSKMAG00000008912	alyref	100	46.429	ENSPLAG00000014380	-	100	46.014	Poecilia_latipinna
ENSKMAG00000008912	alyref	100	46.429	ENSPMEG00000023039	-	100	46.014	Poecilia_mexicana
ENSKMAG00000008912	alyref	100	79.061	ENSPMEG00000003547	alyref	100	77.978	Poecilia_mexicana
ENSKMAG00000008912	alyref	100	47.985	ENSPREG00000003649	-	100	47.080	Poecilia_reticulata
ENSKMAG00000008912	alyref	100	80.072	ENSPREG00000015795	alyref	100	77.899	Poecilia_reticulata
ENSKMAG00000008912	alyref	99	53.091	ENSPNYG00000002879	-	98	52.174	Pundamilia_nyererei
ENSKMAG00000008912	alyref	100	81.818	ENSPNYG00000017498	alyref	100	80.364	Pundamilia_nyererei
ENSKMAG00000008912	alyref	100	77.419	ENSPNAG00000002531	alyref	100	76.534	Pygocentrus_nattereri
ENSKMAG00000008912	alyref	73	73.869	ENSSBOG00000030924	-	87	72.727	Saimiri_boliviensis_boliviensis
ENSKMAG00000008912	alyref	99	56.940	ENSSHAG00000000609	-	99	52.482	Sarcophilus_harrisii
ENSKMAG00000008912	alyref	99	57.143	ENSSHAG00000012866	-	74	57.635	Sarcophilus_harrisii
ENSKMAG00000008912	alyref	70	76.440	ENSSFOG00015003678	alyref	83	76.440	Scleropages_formosus
ENSKMAG00000008912	alyref	78	79.343	ENSSFOG00015003923	alyref	71	80.311	Scleropages_formosus
ENSKMAG00000008912	alyref	100	52.297	ENSSMAG00000011169	-	100	51.000	Scophthalmus_maximus
ENSKMAG00000008912	alyref	100	81.091	ENSSMAG00000009283	alyref	100	80.364	Scophthalmus_maximus
ENSKMAG00000008912	alyref	100	84.307	ENSSDUG00000016158	alyref	100	84.672	Seriola_dumerili
ENSKMAG00000008912	alyref	100	83.636	ENSSLDG00000017803	alyref	100	81.818	Seriola_lalandi_dorsalis
ENSKMAG00000008912	alyref	99	54.015	ENSSPAG00000017028	-	96	52.015	Stegastes_partitus
ENSKMAG00000008912	alyref	100	50.526	ENSTRUG00000003051	-	100	49.648	Takifugu_rubripes
ENSKMAG00000008912	alyref	100	51.254	ENSTNIG00000014136	-	100	47.273	Tetraodon_nigroviridis
ENSKMAG00000008912	alyref	100	73.477	ENSTNIG00000011595	alyref	100	68.231	Tetraodon_nigroviridis
ENSKMAG00000008912	alyref	71	76.166	ENSVVUG00000000272	-	82	76.042	Vulpes_vulpes
ENSKMAG00000008912	alyref	99	79.121	ENSXCOG00000018047	alyref	99	76.449	Xiphophorus_couchianus
ENSKMAG00000008912	alyref	99	79.121	ENSXMAG00000012218	alyref	99	76.449	Xiphophorus_maculatus
ENSKMAG00000008912	alyref	100	47.122	ENSXMAG00000018086	-	100	47.101	Xiphophorus_maculatus