EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000009135 (Gene tree)
Gene ID: 108241251
Gene Symbol: RNPS1
Alias: wu:fa19a11|zgc:65775
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 2997 bases
Position: chrLWHD01000084.1:64520-67516
Accession: 108241251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000012156	RRM_1	PF00076.22	8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000012340	RNPS1-201	1386	XM_017425272	ENSKMAP00000012156	279 (aa)	XP_017280761	UPI0007F8DA75

Gene Model

Click here to download ENSKMAG00000009135's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03013	RNA transport	KEGG
kmr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000009135's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000009135	RNPS1	84	67.220	ENSG00000205937	RNPS1	85	71.784	Homo_sapiens
ENSKMAG00000009135	RNPS1	82	76.087	ENSAPOG00000017310	RNPS1	74	75.983	Acanthochromis_polyacanthus
ENSKMAG00000009135	RNPS1	77	72.430	ENSACIG00000014367	-	76	73.832	Amphilophus_citrinellus
ENSKMAG00000009135	RNPS1	82	76.623	ENSAOCG00000002404	RNPS1	83	78.788	Amphiprion_ocellaris
ENSKMAG00000009135	RNPS1	82	76.522	ENSAPEG00000006497	RNPS1	80	78.696	Amphiprion_percula
ENSKMAG00000009135	RNPS1	82	78.355	ENSATEG00000024267	RNPS1	83	80.952	Anabas_testudineus
ENSKMAG00000009135	RNPS1	84	66.805	ENSANAG00000028802	RNPS1	85	71.369	Aotus_nancymaae
ENSKMAG00000009135	RNPS1	82	83.478	ENSACLG00000025942	RNPS1	82	77.826	Astatotilapia_calliptera
ENSKMAG00000009135	RNPS1	82	67.965	ENSACLG00000021537	-	86	72.294	Astatotilapia_calliptera
ENSKMAG00000009135	RNPS1	82	74.249	ENSAMXG00000006330	-	82	70.386	Astyanax_mexicanus
ENSKMAG00000009135	RNPS1	85	67.213	ENSBTAG00000009969	RNPS1	86	71.721	Bos_taurus
ENSKMAG00000009135	RNPS1	84	67.220	ENSCJAG00000014969	RNPS1	90	68.837	Callithrix_jacchus
ENSKMAG00000009135	RNPS1	84	67.220	ENSTSYG00000001629	RNPS1	85	71.784	Carlito_syrichta
ENSKMAG00000009135	RNPS1	84	67.220	ENSCPOG00000002066	RNPS1	85	71.784	Cavia_porcellus
ENSKMAG00000009135	RNPS1	71	64.039	ENSCCAG00000034480	RNPS1	85	71.784	Cebus_capucinus
ENSKMAG00000009135	RNPS1	93	62.121	ENSCATG00000042361	-	57	76.923	Cercocebus_atys
ENSKMAG00000009135	RNPS1	84	67.220	ENSCATG00000013756	RNPS1	85	71.784	Cercocebus_atys
ENSKMAG00000009135	RNPS1	84	67.220	ENSCLAG00000015546	RNPS1	85	71.784	Chinchilla_lanigera
ENSKMAG00000009135	RNPS1	97	71.739	ENSCSAG00000005219	-	81	68.880	Chlorocebus_sabaeus
ENSKMAG00000009135	RNPS1	84	67.220	ENSCANG00000041307	RNPS1	85	71.784	Colobus_angolensis_palliatus
ENSKMAG00000009135	RNPS1	84	67.220	ENSCGRG00001020431	Rnps1	85	71.784	Cricetulus_griseus_chok1gshd
ENSKMAG00000009135	RNPS1	76	66.359	ENSCGRG00000014021	Rnps1	77	71.429	Cricetulus_griseus_crigri
ENSKMAG00000009135	RNPS1	82	77.922	ENSCSEG00000000402	RNPS1	76	70.130	Cynoglossus_semilaevis
ENSKMAG00000009135	RNPS1	77	93.488	ENSCVAG00000010868	RNPS1	76	93.427	Cyprinodon_variegatus
ENSKMAG00000009135	RNPS1	82	68.803	ENSDARG00000100188	RNPS1	83	73.077	Danio_rerio
ENSKMAG00000009135	RNPS1	82	68.803	ENSDARG00000116743	rnps1	83	73.077	Danio_rerio
ENSKMAG00000009135	RNPS1	84	66.805	ENSDORG00000001755	Rnps1	85	71.369	Dipodomys_ordii
ENSKMAG00000009135	RNPS1	84	67.635	ENSFCAG00000007690	RNPS1	85	72.199	Felis_catus
ENSKMAG00000009135	RNPS1	84	66.805	ENSFDAG00000003386	RNPS1	85	71.369	Fukomys_damarensis
ENSKMAG00000009135	RNPS1	79	82.301	ENSFHEG00000011705	RNPS1	68	91.414	Fundulus_heteroclitus
ENSKMAG00000009135	RNPS1	84	67.635	ENSGALG00000009288	RNPS1	85	72.199	Gallus_gallus
ENSKMAG00000009135	RNPS1	77	92.558	ENSGAFG00000005457	RNPS1	76	92.488	Gambusia_affinis
ENSKMAG00000009135	RNPS1	82	67.241	ENSGACG00000005641	-	82	68.103	Gasterosteus_aculeatus
ENSKMAG00000009135	RNPS1	82	77.586	ENSGACG00000011261	RNPS1	83	86.207	Gasterosteus_aculeatus
ENSKMAG00000009135	RNPS1	84	67.220	ENSGGOG00000014275	RNPS1	85	71.784	Gorilla_gorilla
ENSKMAG00000009135	RNPS1	82	83.043	ENSHBUG00000002494	RNPS1	82	77.391	Haplochromis_burtoni
ENSKMAG00000009135	RNPS1	82	67.965	ENSHBUG00000017337	-	82	72.294	Haplochromis_burtoni
ENSKMAG00000009135	RNPS1	84	67.220	ENSHGLG00000013957	RNPS1	85	71.784	Heterocephalus_glaber_female
ENSKMAG00000009135	RNPS1	78	64.444	ENSHGLG00000006292	-	87	69.124	Heterocephalus_glaber_female
ENSKMAG00000009135	RNPS1	75	57.746	ENSHGLG00000013666	-	72	61.033	Heterocephalus_glaber_female
ENSKMAG00000009135	RNPS1	84	67.220	ENSHGLG00100003539	RNPS1	85	71.784	Heterocephalus_glaber_male
ENSKMAG00000009135	RNPS1	84	67.083	ENSHGLG00100001721	-	78	63.598	Heterocephalus_glaber_male
ENSKMAG00000009135	RNPS1	75	57.746	ENSHGLG00100011327	-	72	61.033	Heterocephalus_glaber_male
ENSKMAG00000009135	RNPS1	82	83.475	ENSHCOG00000004424	RNPS1	83	85.593	Hippocampus_comes
ENSKMAG00000009135	RNPS1	84	67.220	ENSJJAG00000015576	-	85	71.784	Jaculus_jaculus
ENSKMAG00000009135	RNPS1	75	74.762	ENSLBEG00000024091	RNPS1	76	75.000	Labrus_bergylta
ENSKMAG00000009135	RNPS1	82	66.524	ENSLOCG00000001758	RNPS1	83	66.524	Lepisosteus_oculatus
ENSKMAG00000009135	RNPS1	84	67.220	ENSMFAG00000042142	RNPS1	85	71.784	Macaca_fascicularis
ENSKMAG00000009135	RNPS1	84	67.083	ENSMFAG00000044121	-	83	63.071	Macaca_fascicularis
ENSKMAG00000009135	RNPS1	84	67.220	ENSMLEG00000036928	RNPS1	85	71.784	Mandrillus_leucophaeus
ENSKMAG00000009135	RNPS1	82	78.788	ENSMAMG00000021609	-	83	81.385	Mastacembelus_armatus
ENSKMAG00000009135	RNPS1	82	79.221	ENSMAMG00000021148	-	81	74.892	Mastacembelus_armatus
ENSKMAG00000009135	RNPS1	82	68.103	ENSMZEG00005006256	-	83	72.414	Maylandia_zebra
ENSKMAG00000009135	RNPS1	82	83.478	ENSMZEG00005012742	RNPS1	82	77.826	Maylandia_zebra
ENSKMAG00000009135	RNPS1	84	66.805	ENSMICG00000031543	RNPS1	85	71.369	Microcebus_murinus
ENSKMAG00000009135	RNPS1	84	67.220	ENSMOCG00000003429	Rnps1	85	71.784	Microtus_ochrogaster
ENSKMAG00000009135	RNPS1	76	75.472	ENSMMOG00000010863	RNPS1	76	75.943	Mola_mola
ENSKMAG00000009135	RNPS1	84	67.220	ENSMUSG00000034681	Rnps1	85	71.784	Mus_musculus
ENSKMAG00000009135	RNPS1	84	67.220	MGP_PahariEiJ_G0023498	Rnps1	85	71.784	Mus_pahari
ENSKMAG00000009135	RNPS1	84	67.220	MGP_SPRETEiJ_G0022092	Rnps1	85	71.784	Mus_spretus
ENSKMAG00000009135	RNPS1	84	67.220	ENSNGAG00000023702	Rnps1	85	71.784	Nannospalax_galili
ENSKMAG00000009135	RNPS1	77	77.103	ENSNBRG00000023437	RNPS1	76	77.358	Neolamprologus_brichardi
ENSKMAG00000009135	RNPS1	82	68.103	ENSNBRG00000014540	-	85	72.414	Neolamprologus_brichardi
ENSKMAG00000009135	RNPS1	87	66.400	ENSNLEG00000009243	RNPS1	98	68.163	Nomascus_leucogenys
ENSKMAG00000009135	RNPS1	60	55.689	ENSODEG00000002513	-	52	51.261	Octodon_degus
ENSKMAG00000009135	RNPS1	82	68.103	ENSONIG00000019627	-	83	72.414	Oreochromis_niloticus
ENSKMAG00000009135	RNPS1	82	76.087	ENSORLG00000008033	RNPS1	94	73.171	Oryzias_latipes
ENSKMAG00000009135	RNPS1	82	75.983	ENSORLG00020020207	RNPS1	82	73.799	Oryzias_latipes_hni
ENSKMAG00000009135	RNPS1	82	76.419	ENSORLG00015000305	-	82	74.236	Oryzias_latipes_hsok
ENSKMAG00000009135	RNPS1	87	63.306	ENSPPAG00000011845	RNPS1	86	66.805	Pan_paniscus
ENSKMAG00000009135	RNPS1	84	67.635	ENSPPRG00000011255	RNPS1	85	72.199	Panthera_pardus
ENSKMAG00000009135	RNPS1	58	63.190	ENSPTIG00000015643	RNPS1	65	79.032	Panthera_tigris_altaica
ENSKMAG00000009135	RNPS1	84	67.220	ENSPTRG00000031310	RNPS1	85	71.784	Pan_troglodytes
ENSKMAG00000009135	RNPS1	84	67.220	ENSPANG00000015748	RNPS1	85	71.784	Papio_anubis
ENSKMAG00000009135	RNPS1	82	72.340	ENSPKIG00000023465	RNPS1	83	68.936	Paramormyrops_kingsleyae
ENSKMAG00000009135	RNPS1	84	67.220	ENSPEMG00000012797	Rnps1	85	71.784	Peromyscus_maniculatus_bairdii
ENSKMAG00000009135	RNPS1	58	67.485	ENSPCIG00000016114	-	60	77.419	Phascolarctos_cinereus
ENSKMAG00000009135	RNPS1	84	66.805	ENSPCIG00000025012	RNPS1	85	71.784	Phascolarctos_cinereus
ENSKMAG00000009135	RNPS1	77	93.488	ENSPFOG00000009978	RNPS1	76	93.427	Poecilia_formosa
ENSKMAG00000009135	RNPS1	77	93.488	ENSPLAG00000009343	RNPS1	76	93.427	Poecilia_latipinna
ENSKMAG00000009135	RNPS1	77	93.488	ENSPMEG00000008552	RNPS1	76	93.427	Poecilia_mexicana
ENSKMAG00000009135	RNPS1	77	93.488	ENSPREG00000001843	RNPS1	76	93.427	Poecilia_reticulata
ENSKMAG00000009135	RNPS1	84	66.805	ENSPCOG00000005478	RNPS1	85	71.369	Propithecus_coquereli
ENSKMAG00000009135	RNPS1	82	83.478	ENSPNYG00000000585	RNPS1	82	77.826	Pundamilia_nyererei
ENSKMAG00000009135	RNPS1	82	75.536	ENSPNAG00000025479	RNPS1	82	71.674	Pygocentrus_nattereri
ENSKMAG00000009135	RNPS1	84	67.220	ENSRROG00000041252	RNPS1	85	69.710	Rhinopithecus_roxellana
ENSKMAG00000009135	RNPS1	84	67.220	ENSSBOG00000027927	RNPS1	85	71.784	Saimiri_boliviensis_boliviensis
ENSKMAG00000009135	RNPS1	82	76.596	ENSSFOG00015022746	RNPS1	85	72.340	Scleropages_formosus
ENSKMAG00000009135	RNPS1	82	78.879	ENSSFOG00015019341	-	73	78.879	Scleropages_formosus
ENSKMAG00000009135	RNPS1	82	80.000	ENSSMAG00000016933	RNPS1	82	78.261	Scophthalmus_maximus
ENSKMAG00000009135	RNPS1	82	77.922	ENSSDUG00000011453	RNPS1	83	80.519	Seriola_dumerili
ENSKMAG00000009135	RNPS1	80	77.578	ENSSLDG00000021341	RNPS1	81	77.578	Seriola_lalandi_dorsalis
ENSKMAG00000009135	RNPS1	82	77.056	ENSSPAG00000009383	RNPS1	83	79.654	Stegastes_partitus
ENSKMAG00000009135	RNPS1	84	66.667	ENSTGUG00000003237	RNPS1	84	71.250	Taeniopygia_guttata
ENSKMAG00000009135	RNPS1	82	74.678	ENSTRUG00000008602	RNPS1	83	85.837	Takifugu_rubripes
ENSKMAG00000009135	RNPS1	82	75.431	ENSTNIG00000009753	RNPS1	81	78.017	Tetraodon_nigroviridis
ENSKMAG00000009135	RNPS1	80	68.831	ENSXETG00000024439	rnps1	71	68.807	Xenopus_tropicalis
ENSKMAG00000009135	RNPS1	82	93.043	ENSXMAG00000004827	RNPS1	82	93.043	Xiphophorus_maculatus