EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000009329 (Gene tree)
Gene ID: 108230935
Gene Symbol: ptcd2
Alias: zgc:112401
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 3762 bases
Position: chrLWHD01000010.1:1183801-1187562
Accession: 108230935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000012413	MRP-S27	PF10037.9	6.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000012598	-	1910	XM_025004043	ENSKMAP00000012413	381 (aa)	XP_024859811	UPI000D52F679

Gene Model

Click here to download ENSKMAG00000009329's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000009329's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000009329	ptcd2	97	42.246	ENSG00000049883	PTCD2	100	41.379	Homo_sapiens
ENSKMAG00000009329	ptcd2	99	64.211	ENSAPOG00000020682	ptcd2	99	64.211	Acanthochromis_polyacanthus
ENSKMAG00000009329	ptcd2	96	42.473	ENSAMEG00000007194	PTCD2	96	42.473	Ailuropoda_melanoleuca
ENSKMAG00000009329	ptcd2	89	56.140	ENSACIG00000002053	ptcd2	98	56.140	Amphilophus_citrinellus
ENSKMAG00000009329	ptcd2	99	64.737	ENSAOCG00000006616	ptcd2	98	64.737	Amphiprion_ocellaris
ENSKMAG00000009329	ptcd2	99	65.000	ENSAPEG00000022926	ptcd2	98	65.000	Amphiprion_percula
ENSKMAG00000009329	ptcd2	91	44.602	ENSACAG00000009747	PTCD2	89	44.602	Anolis_carolinensis
ENSKMAG00000009329	ptcd2	98	40.318	ENSANAG00000029353	PTCD2	97	40.318	Aotus_nancymaae
ENSKMAG00000009329	ptcd2	99	63.158	ENSACLG00000027742	ptcd2	98	63.158	Astatotilapia_calliptera
ENSKMAG00000009329	ptcd2	92	48.295	ENSAMXG00000029404	ptcd2	94	48.295	Astyanax_mexicanus
ENSKMAG00000009329	ptcd2	91	43.466	ENSBTAG00000014675	PTCD2	91	43.466	Bos_taurus
ENSKMAG00000009329	ptcd2	93	40.947	ENSCJAG00000016364	PTCD2	93	40.947	Callithrix_jacchus
ENSKMAG00000009329	ptcd2	94	44.751	ENSCAFG00000007982	PTCD2	85	44.751	Canis_familiaris
ENSKMAG00000009329	ptcd2	90	45.665	ENSCAFG00020019147	PTCD2	97	45.665	Canis_lupus_dingo
ENSKMAG00000009329	ptcd2	91	43.182	ENSCHIG00000017118	PTCD2	91	43.182	Capra_hircus
ENSKMAG00000009329	ptcd2	90	42.274	ENSCPOG00000040168	PTCD2	90	42.274	Cavia_porcellus
ENSKMAG00000009329	ptcd2	69	46.388	ENSCCAG00000021996	-	84	46.388	Cebus_capucinus
ENSKMAG00000009329	ptcd2	97	39.733	ENSCCAG00000029389	-	97	39.733	Cebus_capucinus
ENSKMAG00000009329	ptcd2	97	42.781	ENSCATG00000019069	PTCD2	98	42.781	Cercocebus_atys
ENSKMAG00000009329	ptcd2	91	44.193	ENSCLAG00000000072	PTCD2	92	44.193	Chinchilla_lanigera
ENSKMAG00000009329	ptcd2	91	43.590	ENSCSAG00000015623	PTCD2	94	43.454	Chlorocebus_sabaeus
ENSKMAG00000009329	ptcd2	75	48.824	ENSCHOG00000010634	PTCD2	79	48.824	Choloepus_hoffmanni
ENSKMAG00000009329	ptcd2	92	42.493	ENSCPBG00000000216	PTCD2	90	42.493	Chrysemys_picta_bellii
ENSKMAG00000009329	ptcd2	94	43.251	ENSCANG00000035636	PTCD2	94	43.251	Colobus_angolensis_palliatus
ENSKMAG00000009329	ptcd2	94	44.231	ENSCGRG00001015289	Ptcd2	78	44.231	Cricetulus_griseus_chok1gshd
ENSKMAG00000009329	ptcd2	94	44.231	ENSCGRG00000006193	Ptcd2	78	44.231	Cricetulus_griseus_crigri
ENSKMAG00000009329	ptcd2	100	66.057	ENSCVAG00000001285	ptcd2	98	66.057	Cyprinodon_variegatus
ENSKMAG00000009329	ptcd2	96	47.411	ENSDARG00000035391	ptcd2	96	47.411	Danio_rerio
ENSKMAG00000009329	ptcd2	97	43.817	ENSDNOG00000008719	PTCD2	97	43.817	Dasypus_novemcinctus
ENSKMAG00000009329	ptcd2	93	42.817	ENSDORG00000004921	Ptcd2	91	42.817	Dipodomys_ordii
ENSKMAG00000009329	ptcd2	92	40.845	ENSETEG00000016542	PTCD2	91	40.845	Echinops_telfairi
ENSKMAG00000009329	ptcd2	100	41.818	ENSEASG00005018038	PTCD2	100	41.818	Equus_asinus_asinus
ENSKMAG00000009329	ptcd2	100	41.927	ENSECAG00000007022	PTCD2	98	41.927	Equus_caballus
ENSKMAG00000009329	ptcd2	94	43.251	ENSEEUG00000014031	PTCD2	94	43.251	Erinaceus_europaeus
ENSKMAG00000009329	ptcd2	93	53.090	ENSELUG00000003584	ptcd2	93	53.090	Esox_lucius
ENSKMAG00000009329	ptcd2	82	43.175	ENSFCAG00000045432	PTCD2	74	43.175	Felis_catus
ENSKMAG00000009329	ptcd2	83	37.304	ENSFALG00000010299	PTCD2	97	37.304	Ficedula_albicollis
ENSKMAG00000009329	ptcd2	91	43.840	ENSFDAG00000018461	PTCD2	91	43.840	Fukomys_damarensis
ENSKMAG00000009329	ptcd2	99	57.368	ENSGMOG00000003637	ptcd2	98	57.368	Gadus_morhua
ENSKMAG00000009329	ptcd2	89	38.953	ENSGALG00000038260	PTCD2	89	38.953	Gallus_gallus
ENSKMAG00000009329	ptcd2	91	46.686	ENSGAGG00000021952	PTCD2	89	46.686	Gopherus_agassizii
ENSKMAG00000009329	ptcd2	97	42.246	ENSGGOG00000010695	PTCD2	96	42.246	Gorilla_gorilla
ENSKMAG00000009329	ptcd2	98	62.933	ENSHBUG00000009191	ptcd2	97	62.933	Haplochromis_burtoni
ENSKMAG00000009329	ptcd2	93	44.167	ENSHGLG00000001234	PTCD2	94	44.167	Heterocephalus_glaber_female
ENSKMAG00000009329	ptcd2	93	44.167	ENSHGLG00100015419	PTCD2	94	44.167	Heterocephalus_glaber_male
ENSKMAG00000009329	ptcd2	99	55.352	ENSHCOG00000001703	ptcd2	97	56.233	Hippocampus_comes
ENSKMAG00000009329	ptcd2	85	52.778	ENSIPUG00000006080	ptcd2	91	52.857	Ictalurus_punctatus
ENSKMAG00000009329	ptcd2	94	43.562	ENSSTOG00000006596	PTCD2	95	43.562	Ictidomys_tridecemlineatus
ENSKMAG00000009329	ptcd2	90	44.058	ENSJJAG00000024388	Ptcd2	90	44.058	Jaculus_jaculus
ENSKMAG00000009329	ptcd2	96	57.967	ENSLBEG00000024871	ptcd2	93	57.967	Labrus_bergylta
ENSKMAG00000009329	ptcd2	99	51.042	ENSLOCG00000011122	ptcd2	98	51.042	Lepisosteus_oculatus
ENSKMAG00000009329	ptcd2	72	46.886	ENSLAFG00000004115	PTCD2	92	45.361	Loxodonta_africana
ENSKMAG00000009329	ptcd2	94	43.251	ENSMFAG00000031516	PTCD2	94	43.251	Macaca_fascicularis
ENSKMAG00000009329	ptcd2	94	42.975	ENSMNEG00000007537	PTCD2	95	42.975	Macaca_nemestrina
ENSKMAG00000009329	ptcd2	94	42.975	ENSMLEG00000031093	PTCD2	94	42.975	Mandrillus_leucophaeus
ENSKMAG00000009329	ptcd2	99	62.565	ENSMAMG00000018529	ptcd2	99	62.565	Mastacembelus_armatus
ENSKMAG00000009329	ptcd2	99	63.158	ENSMZEG00005003625	ptcd2	98	63.158	Maylandia_zebra
ENSKMAG00000009329	ptcd2	87	42.308	ENSMGAG00000005033	PTCD2	95	42.308	Meleagris_gallopavo
ENSKMAG00000009329	ptcd2	94	42.737	ENSMICG00000004535	PTCD2	92	42.737	Microcebus_murinus
ENSKMAG00000009329	ptcd2	94	42.424	ENSMOCG00000019985	Ptcd2	93	42.424	Microtus_ochrogaster
ENSKMAG00000009329	ptcd2	92	44.444	ENSMODG00000001695	PTCD2	91	44.444	Monodelphis_domestica
ENSKMAG00000009329	ptcd2	99	61.316	ENSMALG00000022372	ptcd2	99	61.316	Monopterus_albus
ENSKMAG00000009329	ptcd2	92	42.655	MGP_CAROLIEiJ_G0018829	Ptcd2	93	42.655	Mus_caroli
ENSKMAG00000009329	ptcd2	92	41.808	ENSMUSG00000021650	Ptcd2	93	41.808	Mus_musculus
ENSKMAG00000009329	ptcd2	93	43.646	MGP_PahariEiJ_G0015904	Ptcd2	95	43.646	Mus_pahari
ENSKMAG00000009329	ptcd2	92	42.373	MGP_SPRETEiJ_G0019711	Ptcd2	93	42.373	Mus_spretus
ENSKMAG00000009329	ptcd2	96	42.328	ENSMPUG00000014401	PTCD2	97	42.328	Mustela_putorius_furo
ENSKMAG00000009329	ptcd2	91	43.875	ENSMLUG00000007374	PTCD2	93	43.454	Myotis_lucifugus
ENSKMAG00000009329	ptcd2	94	42.700	ENSNGAG00000005027	Ptcd2	95	42.700	Nannospalax_galili
ENSKMAG00000009329	ptcd2	99	62.632	ENSNBRG00000008174	ptcd2	99	62.632	Neolamprologus_brichardi
ENSKMAG00000009329	ptcd2	86	59.574	ENSNBRG00000000092	-	100	59.574	Neolamprologus_brichardi
ENSKMAG00000009329	ptcd2	97	42.246	ENSNLEG00000004516	PTCD2	96	42.246	Nomascus_leucogenys
ENSKMAG00000009329	ptcd2	90	41.399	ENSOPRG00000007290	PTCD2	88	41.399	Ochotona_princeps
ENSKMAG00000009329	ptcd2	98	43.351	ENSODEG00000016417	PTCD2	97	43.351	Octodon_degus
ENSKMAG00000009329	ptcd2	83	65.300	ENSONIG00000011269	ptcd2	93	65.300	Oreochromis_niloticus
ENSKMAG00000009329	ptcd2	91	40.688	ENSOCUG00000007970	PTCD2	91	40.688	Oryctolagus_cuniculus
ENSKMAG00000009329	ptcd2	98	60.267	ENSORLG00000003851	ptcd2	96	60.267	Oryzias_latipes
ENSKMAG00000009329	ptcd2	98	59.733	ENSORLG00020009823	ptcd2	98	59.733	Oryzias_latipes_hni
ENSKMAG00000009329	ptcd2	90	58.358	ENSORLG00015016777	ptcd2	97	58.358	Oryzias_latipes_hsok
ENSKMAG00000009329	ptcd2	98	60.000	ENSOMEG00000012396	ptcd2	91	60.000	Oryzias_melastigma
ENSKMAG00000009329	ptcd2	98	43.085	ENSOGAG00000008390	PTCD2	97	43.085	Otolemur_garnettii
ENSKMAG00000009329	ptcd2	91	43.466	ENSOARG00000005087	PTCD2	90	43.466	Ovis_aries
ENSKMAG00000009329	ptcd2	97	42.246	ENSPPAG00000028480	PTCD2	96	42.246	Pan_paniscus
ENSKMAG00000009329	ptcd2	97	41.979	ENSPTRG00000016968	PTCD2	96	41.979	Pan_troglodytes
ENSKMAG00000009329	ptcd2	90	43.768	ENSPANG00000006611	PTCD2	89	43.768	Papio_anubis
ENSKMAG00000009329	ptcd2	92	49.859	ENSPKIG00000019896	ptcd2	92	49.859	Paramormyrops_kingsleyae
ENSKMAG00000009329	ptcd2	83	45.768	ENSPSIG00000014559	PTCD2	99	45.768	Pelodiscus_sinensis
ENSKMAG00000009329	ptcd2	95	43.750	ENSPEMG00000000884	Ptcd2	94	43.750	Peromyscus_maniculatus_bairdii
ENSKMAG00000009329	ptcd2	91	46.264	ENSPCIG00000029047	PTCD2	90	46.264	Phascolarctos_cinereus
ENSKMAG00000009329	ptcd2	95	66.667	ENSPLAG00000010456	ptcd2	97	65.860	Poecilia_latipinna
ENSKMAG00000009329	ptcd2	95	66.942	ENSPREG00000021797	ptcd2	93	66.942	Poecilia_reticulata
ENSKMAG00000009329	ptcd2	97	37.433	ENSPPYG00000015543	PTCD2	96	37.433	Pongo_abelii
ENSKMAG00000009329	ptcd2	73	41.071	ENSPCAG00000006806	PTCD2	88	41.071	Procavia_capensis
ENSKMAG00000009329	ptcd2	94	42.896	ENSPVAG00000010935	PTCD2	93	42.896	Pteropus_vampyrus
ENSKMAG00000009329	ptcd2	99	63.158	ENSPNYG00000003122	ptcd2	98	63.158	Pundamilia_nyererei
ENSKMAG00000009329	ptcd2	96	53.804	ENSPNAG00000021490	ptcd2	96	53.804	Pygocentrus_nattereri
ENSKMAG00000009329	ptcd2	92	43.059	ENSRNOG00000028403	Ptcd2	93	43.059	Rattus_norvegicus
ENSKMAG00000009329	ptcd2	97	39.305	ENSRBIG00000032929	PTCD2	96	39.305	Rhinopithecus_bieti
ENSKMAG00000009329	ptcd2	97	42.781	ENSRROG00000000080	PTCD2	98	42.781	Rhinopithecus_roxellana
ENSKMAG00000009329	ptcd2	97	40.800	ENSSBOG00000018911	PTCD2	98	40.800	Saimiri_boliviensis_boliviensis
ENSKMAG00000009329	ptcd2	96	41.892	ENSSHAG00000003833	PTCD2	96	41.892	Sarcophilus_harrisii
ENSKMAG00000009329	ptcd2	89	51.312	ENSSFOG00015015415	ptcd2	89	51.312	Scleropages_formosus
ENSKMAG00000009329	ptcd2	92	57.790	ENSSMAG00000010350	ptcd2	92	57.790	Scophthalmus_maximus
ENSKMAG00000009329	ptcd2	99	63.351	ENSSDUG00000008142	ptcd2	95	63.351	Seriola_dumerili
ENSKMAG00000009329	ptcd2	99	62.565	ENSSLDG00000015284	ptcd2	99	62.565	Seriola_lalandi_dorsalis
ENSKMAG00000009329	ptcd2	78	39.262	ENSSARG00000004983	PTCD2	95	39.262	Sorex_araneus
ENSKMAG00000009329	ptcd2	92	42.373	ENSSPUG00000000176	PTCD2	89	42.373	Sphenodon_punctatus
ENSKMAG00000009329	ptcd2	98	60.267	ENSSPAG00000008591	ptcd2	96	60.267	Stegastes_partitus
ENSKMAG00000009329	ptcd2	91	43.909	ENSSSCG00000016975	PTCD2	83	43.909	Sus_scrofa
ENSKMAG00000009329	ptcd2	87	41.692	ENSTGUG00000005705	PTCD2	96	41.692	Taeniopygia_guttata
ENSKMAG00000009329	ptcd2	93	40.947	ENSTBEG00000016559	PTCD2	93	40.947	Tupaia_belangeri
ENSKMAG00000009329	ptcd2	91	43.714	ENSTTRG00000011851	PTCD2	90	43.714	Tursiops_truncatus
ENSKMAG00000009329	ptcd2	96	42.204	ENSUAMG00000007583	PTCD2	87	42.204	Ursus_americanus
ENSKMAG00000009329	ptcd2	96	42.473	ENSUMAG00000007666	PTCD2	97	42.473	Ursus_maritimus
ENSKMAG00000009329	ptcd2	93	41.274	ENSVPAG00000009597	PTCD2	92	41.274	Vicugna_pacos
ENSKMAG00000009329	ptcd2	91	45.299	ENSVVUG00000007299	-	94	44.847	Vulpes_vulpes
ENSKMAG00000009329	ptcd2	99	43.117	ENSXETG00000031652	PTCD2	98	43.117	Xenopus_tropicalis
ENSKMAG00000009329	ptcd2	95	64.738	ENSXMAG00000005940	ptcd2	91	63.446	Xiphophorus_maculatus