EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000009455 (Gene tree)
Gene ID: 108235381
Gene Symbol: vars
Alias: CHUNP6879|im:7137378|vars2|wu:fb07a11|wu:fb07d10
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 12449 bases
Position: chrLWHD01000034.1:1773876-1786324
Accession: 108235381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000012693	tRNA-synt_1g	PF09334.11	5.4e-13	1	1
ENSKMAP00000012693	Anticodon_1	PF08264.13	8.3e-34	1	1
ENSKMAP00000012693	tRNA-synt_1	PF00133.22	5.6e-207	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000012878	-	3735	XM_017415342	ENSKMAP00000012693	1244 (aa)	XP_017270831	-

Gene Model

Click here to download ENSKMAG00000009455's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000009455's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000009455	vars	80	46.339	ENSKMAG00000001393	vars2	98	45.287

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000009455	vars	100	64.771	ENSG00000204394	VARS	99	71.692	Homo_sapiens
ENSKMAG00000009455	vars	98	86.134	ENSAPOG00000020691	vars	99	86.215	Acanthochromis_polyacanthus
ENSKMAG00000009455	vars	98	86.134	ENSAPOG00000020921	vars	99	86.215	Acanthochromis_polyacanthus
ENSKMAG00000009455	vars	100	65.272	ENSAMEG00000006417	VARS	100	65.272	Ailuropoda_melanoleuca
ENSKMAG00000009455	vars	100	88.016	ENSACIG00000013752	vars	100	88.016	Amphilophus_citrinellus
ENSKMAG00000009455	vars	100	87.814	ENSAOCG00000002447	vars	100	87.290	Amphiprion_ocellaris
ENSKMAG00000009455	vars	100	88.050	ENSAPEG00000010638	vars	99	88.050	Amphiprion_percula
ENSKMAG00000009455	vars	100	86.667	ENSATEG00000020219	vars	100	86.667	Anabas_testudineus
ENSKMAG00000009455	vars	90	69.258	ENSACAG00000029133	-	99	70.341	Anolis_carolinensis
ENSKMAG00000009455	vars	100	64.692	ENSANAG00000015453	VARS	100	64.929	Aotus_nancymaae
ENSKMAG00000009455	vars	100	87.461	ENSACLG00000025699	vars	97	87.461	Astatotilapia_calliptera
ENSKMAG00000009455	vars	96	79.900	ENSAMXG00000017716	vars	96	79.883	Astyanax_mexicanus
ENSKMAG00000009455	vars	100	64.613	ENSBTAG00000005631	VARS	100	65.008	Bos_taurus
ENSKMAG00000009455	vars	100	64.455	ENSCJAG00000002604	VARS	100	64.692	Callithrix_jacchus
ENSKMAG00000009455	vars	100	64.650	ENSCAFG00000000636	VARS	100	64.650	Canis_familiaris
ENSKMAG00000009455	vars	94	65.633	ENSCAFG00020020790	VARS	96	65.633	Canis_lupus_dingo
ENSKMAG00000009455	vars	100	64.613	ENSCHIG00000011008	VARS	100	65.008	Capra_hircus
ENSKMAG00000009455	vars	100	64.771	ENSTSYG00000001567	VARS	100	65.008	Carlito_syrichta
ENSKMAG00000009455	vars	91	67.273	ENSCAPG00000013736	VARS	99	67.186	Cavia_aperea
ENSKMAG00000009455	vars	100	64.258	ENSCPOG00000000870	VARS	100	64.179	Cavia_porcellus
ENSKMAG00000009455	vars	100	64.692	ENSCCAG00000035656	VARS	100	64.929	Cebus_capucinus
ENSKMAG00000009455	vars	100	65.008	ENSCATG00000022394	VARS	100	65.166	Cercocebus_atys
ENSKMAG00000009455	vars	92	63.606	ENSCLAG00000009470	VARS	97	63.524	Chinchilla_lanigera
ENSKMAG00000009455	vars	100	64.850	ENSCSAG00000008784	VARS	100	65.008	Chlorocebus_sabaeus
ENSKMAG00000009455	vars	78	74.101	ENSCPBG00000007943	VARS	96	73.926	Chrysemys_picta_bellii
ENSKMAG00000009455	vars	100	65.008	ENSCANG00000033570	VARS	100	65.166	Colobus_angolensis_palliatus
ENSKMAG00000009455	vars	100	64.929	ENSCGRG00001005686	Vars	100	65.245	Cricetulus_griseus_chok1gshd
ENSKMAG00000009455	vars	93	63.043	ENSCGRG00000013352	Vars	78	63.545	Cricetulus_griseus_crigri
ENSKMAG00000009455	vars	100	83.093	ENSCSEG00000019652	vars	100	83.013	Cynoglossus_semilaevis
ENSKMAG00000009455	vars	100	88.558	ENSCVAG00000022398	vars	100	88.871	Cyprinodon_variegatus
ENSKMAG00000009455	vars	100	82.261	ENSDARG00000044575	vars	100	82.104	Danio_rerio
ENSKMAG00000009455	vars	84	69.376	ENSDORG00000016433	Vars	94	69.754	Dipodomys_ordii
ENSKMAG00000009455	vars	68	74.635	ENSETEG00000003824	VARS	76	74.635	Echinops_telfairi
ENSKMAG00000009455	vars	58	65.706	ENSEBUG00000004637	vars	100	65.706	Eptatretus_burgeri
ENSKMAG00000009455	vars	52	73.647	ENSEBUG00000007086	vars	83	73.647	Eptatretus_burgeri
ENSKMAG00000009455	vars	100	65.166	ENSEASG00005015673	VARS	100	65.403	Equus_asinus_asinus
ENSKMAG00000009455	vars	100	65.193	ENSECAG00000014620	VARS	100	65.430	Equus_caballus
ENSKMAG00000009455	vars	71	70.426	ENSEEUG00000004116	VARS	73	70.426	Erinaceus_europaeus
ENSKMAG00000009455	vars	100	80.859	ENSELUG00000006550	vars	97	80.625	Esox_lucius
ENSKMAG00000009455	vars	100	65.166	ENSFCAG00000004510	VARS	100	65.324	Felis_catus
ENSKMAG00000009455	vars	83	70.060	ENSFDAG00000011401	VARS	100	69.478	Fukomys_damarensis
ENSKMAG00000009455	vars	100	86.520	ENSFHEG00000010672	vars	100	87.069	Fundulus_heteroclitus
ENSKMAG00000009455	vars	100	78.410	ENSGMOG00000014908	vars	100	78.410	Gadus_morhua
ENSKMAG00000009455	vars	100	88.305	ENSGAFG00000021630	vars	100	88.305	Gambusia_affinis
ENSKMAG00000009455	vars	93	85.450	ENSGACG00000009601	vars	100	81.882	Gasterosteus_aculeatus
ENSKMAG00000009455	vars	100	64.850	ENSGGOG00000011364	VARS	100	65.008	Gorilla_gorilla
ENSKMAG00000009455	vars	100	87.382	ENSHBUG00000017151	vars	97	87.382	Haplochromis_burtoni
ENSKMAG00000009455	vars	100	64.072	ENSHGLG00000011646	VARS	100	64.230	Heterocephalus_glaber_female
ENSKMAG00000009455	vars	94	61.366	ENSHGLG00100018062	VARS	99	61.250	Heterocephalus_glaber_male
ENSKMAG00000009455	vars	99	82.875	ENSHCOG00000012198	vars	99	82.482	Hippocampus_comes
ENSKMAG00000009455	vars	100	81.583	ENSIPUG00000005218	vars	100	81.191	Ictalurus_punctatus
ENSKMAG00000009455	vars	100	64.929	ENSSTOG00000013112	VARS	100	65.245	Ictidomys_tridecemlineatus
ENSKMAG00000009455	vars	100	52.468	ENSJJAG00000015343	-	99	54.426	Jaculus_jaculus
ENSKMAG00000009455	vars	100	64.557	ENSJJAG00000019749	-	100	64.557	Jaculus_jaculus
ENSKMAG00000009455	vars	100	86.276	ENSLBEG00000010341	vars	100	86.276	Labrus_bergylta
ENSKMAG00000009455	vars	94	65.239	ENSLACG00000015232	VARS	99	65.622	Latimeria_chalumnae
ENSKMAG00000009455	vars	100	73.539	ENSLOCG00000004240	vars	100	73.697	Lepisosteus_oculatus
ENSKMAG00000009455	vars	100	64.664	ENSLAFG00000023090	VARS	100	64.664	Loxodonta_africana
ENSKMAG00000009455	vars	100	64.929	ENSMFAG00000001032	VARS	100	65.087	Macaca_fascicularis
ENSKMAG00000009455	vars	100	64.929	ENSMMUG00000006828	VARS	100	65.087	Macaca_mulatta
ENSKMAG00000009455	vars	100	64.929	ENSMNEG00000042072	VARS	100	65.087	Macaca_nemestrina
ENSKMAG00000009455	vars	100	65.008	ENSMLEG00000039307	VARS	100	65.166	Mandrillus_leucophaeus
ENSKMAG00000009455	vars	100	87.390	ENSMAMG00000003949	vars	100	87.390	Mastacembelus_armatus
ENSKMAG00000009455	vars	100	87.461	ENSMZEG00005018327	vars	100	84.788	Maylandia_zebra
ENSKMAG00000009455	vars	100	64.692	ENSMAUG00000006715	Vars	100	65.166	Mesocricetus_auratus
ENSKMAG00000009455	vars	100	65.324	ENSMICG00000003548	VARS	100	65.166	Microcebus_murinus
ENSKMAG00000009455	vars	100	63.895	ENSMOCG00000015404	Vars	100	64.291	Microtus_ochrogaster
ENSKMAG00000009455	vars	100	86.102	ENSMMOG00000015801	vars	100	85.783	Mola_mola
ENSKMAG00000009455	vars	100	65.166	ENSMODG00000015204	-	100	65.719	Monodelphis_domestica
ENSKMAG00000009455	vars	99	86.442	ENSMALG00000022532	vars	99	86.442	Monopterus_albus
ENSKMAG00000009455	vars	100	65.850	MGP_CAROLIEiJ_G0021491	Vars	100	65.850	Mus_caroli
ENSKMAG00000009455	vars	100	65.850	ENSMUSG00000007029	Vars	100	65.850	Mus_musculus
ENSKMAG00000009455	vars	100	65.692	MGP_PahariEiJ_G0020486	Vars	100	65.613	Mus_pahari
ENSKMAG00000009455	vars	100	65.929	MGP_SPRETEiJ_G0022396	Vars	100	65.929	Mus_spretus
ENSKMAG00000009455	vars	100	65.087	ENSMPUG00000010821	VARS	100	65.087	Mustela_putorius_furo
ENSKMAG00000009455	vars	78	68.251	ENSMLUG00000013126	VARS	100	67.644	Myotis_lucifugus
ENSKMAG00000009455	vars	100	65.012	ENSNGAG00000012151	Vars	100	65.012	Nannospalax_galili
ENSKMAG00000009455	vars	100	87.147	ENSNBRG00000020520	vars	100	87.147	Neolamprologus_brichardi
ENSKMAG00000009455	vars	100	64.692	ENSNLEG00000006351	VARS	100	64.929	Nomascus_leucogenys
ENSKMAG00000009455	vars	100	63.478	ENSMEUG00000011378	VARS	95	71.515	Notamacropus_eugenii
ENSKMAG00000009455	vars	100	65.008	ENSOPRG00000003607	VARS	100	65.324	Ochotona_princeps
ENSKMAG00000009455	vars	100	64.184	ENSODEG00000017681	VARS	100	64.184	Octodon_degus
ENSKMAG00000009455	vars	100	88.003	ENSONIG00000013064	vars	100	88.003	Oreochromis_niloticus
ENSKMAG00000009455	vars	77	66.981	ENSOANG00000005400	VARS	98	67.219	Ornithorhynchus_anatinus
ENSKMAG00000009455	vars	100	64.206	ENSOCUG00000022463	VARS	100	64.206	Oryctolagus_cuniculus
ENSKMAG00000009455	vars	100	85.514	ENSORLG00000013063	vars	100	85.358	Oryzias_latipes
ENSKMAG00000009455	vars	100	85.759	ENSORLG00020003504	vars	100	85.759	Oryzias_latipes_hni
ENSKMAG00000009455	vars	100	85.826	ENSORLG00015009001	vars	100	85.826	Oryzias_latipes_hsok
ENSKMAG00000009455	vars	100	86.139	ENSOMEG00000015016	vars	100	86.139	Oryzias_melastigma
ENSKMAG00000009455	vars	100	65.224	ENSOGAG00000007515	VARS	100	65.067	Otolemur_garnettii
ENSKMAG00000009455	vars	100	64.771	ENSPPAG00000034012	VARS	100	65.008	Pan_paniscus
ENSKMAG00000009455	vars	100	65.166	ENSPPRG00000014855	VARS	100	65.324	Panthera_pardus
ENSKMAG00000009455	vars	85	68.587	ENSPTIG00000010462	VARS	97	66.344	Panthera_tigris_altaica
ENSKMAG00000009455	vars	100	64.692	ENSPTRG00000017985	VARS	100	64.929	Pan_troglodytes
ENSKMAG00000009455	vars	100	63.422	ENSPANG00000014565	VARS	100	63.579	Papio_anubis
ENSKMAG00000009455	vars	100	78.894	ENSPKIG00000016304	vars	100	78.660	Paramormyrops_kingsleyae
ENSKMAG00000009455	vars	100	83.320	ENSPMGG00000023909	vars	100	83.240	Periophthalmus_magnuspinnatus
ENSKMAG00000009455	vars	100	64.929	ENSPEMG00000006639	Vars	100	65.245	Peromyscus_maniculatus_bairdii
ENSKMAG00000009455	vars	100	64.771	ENSPCIG00000018553	VARS	100	65.324	Phascolarctos_cinereus
ENSKMAG00000009455	vars	100	87.991	ENSPFOG00000015690	vars	100	87.991	Poecilia_formosa
ENSKMAG00000009455	vars	100	87.834	ENSPLAG00000009590	vars	100	87.834	Poecilia_latipinna
ENSKMAG00000009455	vars	100	87.912	ENSPMEG00000004708	vars	100	87.912	Poecilia_mexicana
ENSKMAG00000009455	vars	100	85.760	ENSPREG00000013264	vars	100	85.360	Poecilia_reticulata
ENSKMAG00000009455	vars	100	63.428	ENSPPYG00000016460	VARS	100	63.665	Pongo_abelii
ENSKMAG00000009455	vars	86	66.308	ENSPCAG00000013565	VARS	86	66.308	Procavia_capensis
ENSKMAG00000009455	vars	100	65.193	ENSPCOG00000010942	VARS	100	65.430	Propithecus_coquereli
ENSKMAG00000009455	vars	100	62.717	ENSPVAG00000012403	VARS	100	62.559	Pteropus_vampyrus
ENSKMAG00000009455	vars	100	87.461	ENSPNYG00000022511	vars	100	87.461	Pundamilia_nyererei
ENSKMAG00000009455	vars	100	81.989	ENSPNAG00000020962	vars	100	81.754	Pygocentrus_nattereri
ENSKMAG00000009455	vars	100	65.008	ENSRNOG00000000867	Vars	100	65.245	Rattus_norvegicus
ENSKMAG00000009455	vars	100	64.929	ENSRBIG00000041669	VARS	100	65.087	Rhinopithecus_bieti
ENSKMAG00000009455	vars	100	64.929	ENSRROG00000045490	VARS	100	65.087	Rhinopithecus_roxellana
ENSKMAG00000009455	vars	100	64.692	ENSSBOG00000035402	VARS	100	64.929	Saimiri_boliviensis_boliviensis
ENSKMAG00000009455	vars	100	64.498	ENSSHAG00000006937	VARS	100	64.996	Sarcophilus_harrisii
ENSKMAG00000009455	vars	100	78.193	ENSSFOG00015014272	vars	100	78.193	Scleropages_formosus
ENSKMAG00000009455	vars	100	84.730	ENSSMAG00000009596	vars	99	84.417	Scophthalmus_maximus
ENSKMAG00000009455	vars	100	87.862	ENSSDUG00000014177	vars	100	87.862	Seriola_dumerili
ENSKMAG00000009455	vars	100	87.471	ENSSLDG00000025316	vars	100	87.471	Seriola_lalandi_dorsalis
ENSKMAG00000009455	vars	100	87.814	ENSSPAG00000017068	vars	100	87.814	Stegastes_partitus
ENSKMAG00000009455	vars	100	65.036	ENSSSCG00000038950	VARS	100	65.272	Sus_scrofa
ENSKMAG00000009455	vars	81	82.772	ENSTRUG00000012307	vars	96	82.772	Takifugu_rubripes
ENSKMAG00000009455	vars	100	85.194	ENSTNIG00000008011	vars	100	84.877	Tetraodon_nigroviridis
ENSKMAG00000009455	vars	100	59.242	ENSTTRG00000014128	VARS	100	59.321	Tursiops_truncatus
ENSKMAG00000009455	vars	100	63.253	ENSUAMG00000010424	VARS	100	63.253	Ursus_americanus
ENSKMAG00000009455	vars	100	59.655	ENSUMAG00000013486	VARS	100	59.579	Ursus_maritimus
ENSKMAG00000009455	vars	100	64.835	ENSVVUG00000021323	VARS	100	64.600	Vulpes_vulpes
ENSKMAG00000009455	vars	100	64.437	ENSXETG00000024076	vars	100	64.201	Xenopus_tropicalis
ENSKMAG00000009455	vars	100	87.322	ENSXCOG00000019172	vars	100	87.322	Xiphophorus_couchianus
ENSKMAG00000009455	vars	100	88.148	ENSXMAG00000010927	vars	100	88.148	Xiphophorus_maculatus