EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000009464 (Gene tree)
Gene ID: 108248394
Gene Symbol: srsf2a
Alias: PR264|SC-35|SC35|SFRS2|SFRS2A
Full Name: serine and arginine rich splicing factor 2
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 3935 bases
Position: chrLWHD01000005.1:2839981-2843915
Accession: 108248394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000012606	RRM_1	PF00076.22	7.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000012791	-	2441	XM_017437159	ENSKMAP00000012606	229 (aa)	XP_017292648	UPI0007F8721A

Gene Model

Click here to download ENSKMAG00000009464's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG
kmr05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000009464's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000009464	srsf2a	67	78.571	ENSAMXG00000042718	srsf2a	53	97.321	Astyanax_mexicanus
ENSKMAG00000009464	srsf2a	96	61.644	ENSCHOG00000014019	-	53	91.667	Choloepus_hoffmanni
ENSKMAG00000009464	srsf2a	85	70.256	ENSDARG00000057484	srsf2a	95	96.429	Danio_rerio
ENSKMAG00000009464	srsf2a	85	50.769	ENSDNOG00000033905	-	53	63.000	Dasypus_novemcinctus
ENSKMAG00000009464	srsf2a	59	69.630	ENSFDAG00000012646	-	50	92.308	Fukomys_damarensis
ENSKMAG00000009464	srsf2a	82	75.936	ENSHCOG00000015538	srsf2a	53	96.330	Hippocampus_comes
ENSKMAG00000009464	srsf2a	75	73.256	ENSIPUG00000004066	SRSF2	51	97.321	Ictalurus_punctatus
ENSKMAG00000009464	srsf2a	75	73.256	ENSLOCG00000011252	srsf2a	52	94.643	Lepisosteus_oculatus
ENSKMAG00000009464	srsf2a	50	85.088	ENSMZEG00005001748	-	50	86.607	Maylandia_zebra
ENSKMAG00000009464	srsf2a	99	70.614	ENSMMOG00000020751	srsf2a	52	98.214	Mola_mola
ENSKMAG00000009464	srsf2a	55	55.118	ENSMLUG00000026613	-	52	59.813	Myotis_lucifugus
ENSKMAG00000009464	srsf2a	82	67.553	ENSNLEG00000002547	SRSF2	52	94.643	Nomascus_leucogenys
ENSKMAG00000009464	srsf2a	53	70.079	ENSOCUG00000021840	-	51	74.336	Oryctolagus_cuniculus
ENSKMAG00000009464	srsf2a	78	62.570	ENSORLG00000001230	srsf2b	50	90.476	Oryzias_latipes
ENSKMAG00000009464	srsf2a	78	62.570	ENSORLG00020014420	srsf2b	50	90.476	Oryzias_latipes_hni
ENSKMAG00000009464	srsf2a	78	62.921	ENSORLG00015007643	srsf2b	50	90.476	Oryzias_latipes_hsok
ENSKMAG00000009464	srsf2a	68	58.791	ENSPTRG00000046909	SRSF8	58	56.098	Pan_troglodytes
ENSKMAG00000009464	srsf2a	95	61.751	ENSSFOG00015003975	-	50	97.321	Scleropages_formosus
ENSKMAG00000009464	srsf2a	100	70.259	ENSSMAG00000014723	srsf2b	51	89.565	Scophthalmus_maximus
ENSKMAG00000009464	srsf2a	51	97.436	ENSSMAG00000005854	srsf2a	53	98.214	Scophthalmus_maximus
ENSKMAG00000009464	srsf2a	80	65.761	ENSSDUG00000014762	srsf2b	54	93.860	Seriola_dumerili
ENSKMAG00000009464	srsf2a	51	99.145	ENSSDUG00000013865	srsf2a	50	99.107	Seriola_dumerili
ENSKMAG00000009464	srsf2a	51	99.145	ENSSLDG00000017717	srsf2a	50	99.107	Seriola_lalandi_dorsalis
ENSKMAG00000009464	srsf2a	59	66.423	ENSSSCG00000012212	-	52	73.529	Sus_scrofa
ENSKMAG00000009464	srsf2a	57	91.603	ENSXCOG00000005917	srsf2a	51	99.107	Xiphophorus_couchianus