EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000009484 (Gene tree)
Gene ID: 108237760
Gene Symbol: setd1a
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 23054 bases
Position: chrLWHD01000048.1:1899764-1922817
Accession: 108237760
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000012631	RRM_1	PF00076.22	4.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000012816	-	8778	XM_017419411	ENSKMAP00000012631	2203 (aa)	XP_017274900	UPI0007F8C474

Gene Model

Click here to download ENSKMAG00000009484's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000009484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000009484	setd1a	82	97.512	ENSAPOG00000018002	setd1a	78	97.512	Acanthochromis_polyacanthus
ENSKMAG00000009484	setd1a	76	87.988	ENSACIG00000007144	setd1a	98	87.988	Amphilophus_citrinellus
ENSKMAG00000009484	setd1a	100	86.151	ENSAOCG00000003663	setd1a	100	85.881	Amphiprion_ocellaris
ENSKMAG00000009484	setd1a	100	81.847	ENSATEG00000022798	setd1a	100	82.207	Anabas_testudineus
ENSKMAG00000009484	setd1a	100	83.928	ENSACLG00000024747	setd1a	100	83.281	Astatotilapia_calliptera
ENSKMAG00000009484	setd1a	52	78.041	ENSCANG00000038478	-	51	78.041	Colobus_angolensis_palliatus
ENSKMAG00000009484	setd1a	100	78.184	ENSCSEG00000021605	setd1a	100	78.004	Cynoglossus_semilaevis
ENSKMAG00000009484	setd1a	100	82.624	ENSCVAG00000011672	setd1a	100	82.443	Cyprinodon_variegatus
ENSKMAG00000009484	setd1a	100	59.123	ENSELUG00000020261	setd1a	74	56.473	Esox_lucius
ENSKMAG00000009484	setd1a	89	78.841	ENSFHEG00000023258	setd1a	97	89.231	Fundulus_heteroclitus
ENSKMAG00000009484	setd1a	63	90.741	ENSGAFG00000011698	setd1a	86	90.741	Gambusia_affinis
ENSKMAG00000009484	setd1a	79	84.459	ENSGACG00000013688	setd1a	74	85.792	Gasterosteus_aculeatus
ENSKMAG00000009484	setd1a	100	84.424	ENSHBUG00000008893	setd1a	100	83.868	Haplochromis_burtoni
ENSKMAG00000009484	setd1a	77	84.943	ENSHCOG00000003119	setd1a	96	85.632	Hippocampus_comes
ENSKMAG00000009484	setd1a	69	78.198	ENSLBEG00000004399	setd1a	100	78.997	Labrus_bergylta
ENSKMAG00000009484	setd1a	71	90.637	ENSMAMG00000021851	setd1a	98	89.139	Mastacembelus_armatus
ENSKMAG00000009484	setd1a	100	83.958	ENSMZEG00005023141	setd1a	100	83.092	Maylandia_zebra
ENSKMAG00000009484	setd1a	70	91.691	ENSMMOG00000016992	setd1a	98	92.464	Mola_mola
ENSKMAG00000009484	setd1a	99	72.756	ENSMALG00000007401	setd1a	98	73.727	Monopterus_albus
ENSKMAG00000009484	setd1a	74	79.426	ENSNBRG00000004760	setd1a	100	79.306	Neolamprologus_brichardi
ENSKMAG00000009484	setd1a	100	79.367	ENSORLG00000002213	setd1a	100	79.295	Oryzias_latipes
ENSKMAG00000009484	setd1a	100	79.421	ENSORLG00020011897	setd1a	100	79.285	Oryzias_latipes_hni
ENSKMAG00000009484	setd1a	100	79.602	ENSORLG00015004826	setd1a	100	79.376	Oryzias_latipes_hsok
ENSKMAG00000009484	setd1a	100	79.059	ENSOMEG00000019732	setd1a	100	79.078	Oryzias_melastigma
ENSKMAG00000009484	setd1a	57	66.555	ENSOGAG00000028006	-	55	72.500	Otolemur_garnettii
ENSKMAG00000009484	setd1a	100	78.008	ENSPFOG00000013669	setd1a	100	77.873	Poecilia_formosa
ENSKMAG00000009484	setd1a	100	80.207	ENSPLAG00000009294	setd1a	100	79.261	Poecilia_latipinna
ENSKMAG00000009484	setd1a	100	80.045	ENSPMEG00000005864	setd1a	100	79.234	Poecilia_mexicana
ENSKMAG00000009484	setd1a	100	79.694	ENSPREG00000010201	setd1a	100	79.469	Poecilia_reticulata
ENSKMAG00000009484	setd1a	51	79.730	ENSPVAG00000011049	-	55	74.419	Pteropus_vampyrus
ENSKMAG00000009484	setd1a	100	83.567	ENSPNYG00000014139	setd1a	100	83.371	Pundamilia_nyererei
ENSKMAG00000009484	setd1a	100	80.629	ENSSMAG00000008846	setd1a	100	80.539	Scophthalmus_maximus
ENSKMAG00000009484	setd1a	100	83.926	ENSSDUG00000022142	setd1a	100	84.872	Seriola_dumerili
ENSKMAG00000009484	setd1a	100	83.836	ENSSLDG00000018250	setd1a	100	84.782	Seriola_lalandi_dorsalis
ENSKMAG00000009484	setd1a	100	84.903	ENSSPAG00000007822	setd1a	100	85.759	Stegastes_partitus
ENSKMAG00000009484	setd1a	77	84.222	ENSTRUG00000008953	setd1a	99	81.282	Takifugu_rubripes
ENSKMAG00000009484	setd1a	79	89.362	ENSTNIG00000014930	setd1a	85	80.263	Tetraodon_nigroviridis
ENSKMAG00000009484	setd1a	95	80.623	ENSXCOG00000017585	setd1a	59	80.156	Xiphophorus_couchianus
ENSKMAG00000009484	setd1a	100	80.045	ENSXMAG00000008021	setd1a	100	79.324	Xiphophorus_maculatus