EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000009488 (Gene tree)
Gene ID: 108242364
Gene Symbol: REXO5
Alias: NEF-sp
Full Name: RNA exonuclease 5
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 25516 bases
Position: chrLWHD01000001.1:9783377-9808892
Accession: 108242364
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000012641	RRM_1	PF00076.22	4.7e-12	1	2
ENSKMAP00000012641	RRM_1	PF00076.22	4.7e-12	2	2
ENSKMAP00000012661	RRM_1	PF00076.22	4.7e-12	1	2
ENSKMAP00000012661	RRM_1	PF00076.22	4.7e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000012826	REXO5-201	2673	XM_017427267	ENSKMAP00000012641	804 (aa)	XP_017282756	UPI0007F8C916
ENSKMAT00000012846	REXO5-202	2683	XM_017427187	ENSKMAP00000012661	804 (aa)	XP_017282676	UPI0007F8C916

Gene Model

Click here to download ENSKMAG00000009488's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000009488's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000009488	REXO5	91	34.034	ENSG00000005189	REXO5	99	57.042	Homo_sapiens
ENSKMAG00000009488	REXO5	98	67.929	ENSAPOG00000008514	REXO5	99	67.578	Acanthochromis_polyacanthus
ENSKMAG00000009488	REXO5	92	33.506	ENSAMEG00000006178	REXO5	91	33.506	Ailuropoda_melanoleuca
ENSKMAG00000009488	REXO5	50	64.706	ENSAOCG00000003481	-	81	64.706	Amphiprion_ocellaris
ENSKMAG00000009488	REXO5	98	67.551	ENSAPEG00000010627	REXO5	100	67.122	Amphiprion_percula
ENSKMAG00000009488	REXO5	75	70.840	ENSATEG00000004682	REXO5	97	71.779	Anabas_testudineus
ENSKMAG00000009488	REXO5	93	35.521	ENSAPLG00000015740	REXO5	99	35.521	Anas_platyrhynchos
ENSKMAG00000009488	REXO5	95	33.163	ENSACAG00000009744	REXO5	95	33.163	Anolis_carolinensis
ENSKMAG00000009488	REXO5	91	33.114	ENSANAG00000034379	REXO5	90	33.114	Aotus_nancymaae
ENSKMAG00000009488	REXO5	79	57.143	ENSACLG00000004778	REXO5	99	57.143	Astatotilapia_calliptera
ENSKMAG00000009488	REXO5	95	33.586	ENSBTAG00000006449	REXO5	93	33.586	Bos_taurus
ENSKMAG00000009488	REXO5	92	33.551	ENSCJAG00000009363	REXO5	91	33.551	Callithrix_jacchus
ENSKMAG00000009488	REXO5	92	33.725	ENSCAFG00000017924	REXO5	98	33.376	Canis_familiaris
ENSKMAG00000009488	REXO5	92	33.290	ENSCAFG00020021846	REXO5	91	33.290	Canis_lupus_dingo
ENSKMAG00000009488	REXO5	95	34.465	ENSCHIG00000022443	REXO5	95	34.465	Capra_hircus
ENSKMAG00000009488	REXO5	98	32.475	ENSCPOG00000008940	REXO5	92	36.260	Cavia_porcellus
ENSKMAG00000009488	REXO5	91	33.640	ENSCCAG00000034936	REXO5	90	33.640	Cebus_capucinus
ENSKMAG00000009488	REXO5	98	33.538	ENSCATG00000044063	REXO5	97	33.538	Cercocebus_atys
ENSKMAG00000009488	REXO5	98	32.643	ENSCLAG00000008033	REXO5	93	32.643	Chinchilla_lanigera
ENSKMAG00000009488	REXO5	98	33.538	ENSCSAG00000007562	REXO5	97	33.538	Chlorocebus_sabaeus
ENSKMAG00000009488	REXO5	93	34.975	ENSCPBG00000019062	REXO5	93	34.975	Chrysemys_picta_bellii
ENSKMAG00000009488	REXO5	98	33.415	ENSCANG00000035776	REXO5	97	33.415	Colobus_angolensis_palliatus
ENSKMAG00000009488	REXO5	97	31.527	ENSCGRG00001016179	-	98	31.527	Cricetulus_griseus_chok1gshd
ENSKMAG00000009488	REXO5	89	39.806	ENSCGRG00000010868	-	94	39.806	Cricetulus_griseus_crigri
ENSKMAG00000009488	REXO5	71	55.304	ENSCSEG00000002060	-	99	56.000	Cynoglossus_semilaevis
ENSKMAG00000009488	REXO5	55	66.667	ENSCVAG00000014887	-	86	66.667	Cyprinodon_variegatus
ENSKMAG00000009488	REXO5	92	34.615	ENSEASG00005007266	REXO5	99	33.655	Equus_asinus_asinus
ENSKMAG00000009488	REXO5	98	33.578	ENSECAG00000018769	REXO5	87	33.578	Equus_caballus
ENSKMAG00000009488	REXO5	80	48.949	ENSEEUG00000003572	REXO5	84	48.949	Erinaceus_europaeus
ENSKMAG00000009488	REXO5	92	34.115	ENSFCAG00000015160	REXO5	91	34.115	Felis_catus
ENSKMAG00000009488	REXO5	91	35.984	ENSFALG00000014026	REXO5	96	35.984	Ficedula_albicollis
ENSKMAG00000009488	REXO5	99	64.815	ENSFHEG00000013388	REXO5	100	64.815	Fundulus_heteroclitus
ENSKMAG00000009488	REXO5	92	33.766	ENSGALG00000002239	REXO5	92	33.766	Gallus_gallus
ENSKMAG00000009488	REXO5	99	58.816	ENSGAFG00000011045	REXO5	98	59.012	Gambusia_affinis
ENSKMAG00000009488	REXO5	52	59.579	ENSGACG00000019507	-	92	59.579	Gasterosteus_aculeatus
ENSKMAG00000009488	REXO5	99	33.810	ENSGAGG00000008242	REXO5	99	33.810	Gopherus_agassizii
ENSKMAG00000009488	REXO5	91	34.034	ENSGGOG00000004539	REXO5	90	34.034	Gorilla_gorilla
ENSKMAG00000009488	REXO5	99	57.711	ENSHBUG00000017976	REXO5	99	57.711	Haplochromis_burtoni
ENSKMAG00000009488	REXO5	87	31.593	ENSHGLG00000012652	REXO5	99	31.731	Heterocephalus_glaber_female
ENSKMAG00000009488	REXO5	98	31.418	ENSHGLG00100013255	REXO5	91	38.129	Heterocephalus_glaber_male
ENSKMAG00000009488	REXO5	66	53.565	ENSHCOG00000008648	REXO5	94	55.147	Hippocampus_comes
ENSKMAG00000009488	REXO5	67	39.350	ENSSTOG00000007071	REXO5	80	39.350	Ictidomys_tridecemlineatus
ENSKMAG00000009488	REXO5	91	34.483	ENSJJAG00000023821	-	91	34.483	Jaculus_jaculus
ENSKMAG00000009488	REXO5	99	60.520	ENSLBEG00000009276	REXO5	100	60.520	Labrus_bergylta
ENSKMAG00000009488	REXO5	79	37.785	ENSLACG00000001758	REXO5	99	37.785	Latimeria_chalumnae
ENSKMAG00000009488	REXO5	98	33.909	ENSLAFG00000006157	REXO5	98	33.909	Loxodonta_africana
ENSKMAG00000009488	REXO5	98	33.538	ENSMFAG00000036613	REXO5	97	33.538	Macaca_fascicularis
ENSKMAG00000009488	REXO5	98	33.784	ENSMMUG00000016748	REXO5	97	33.784	Macaca_mulatta
ENSKMAG00000009488	REXO5	98	33.538	ENSMNEG00000045028	REXO5	97	33.538	Macaca_nemestrina
ENSKMAG00000009488	REXO5	98	33.538	ENSMLEG00000029851	REXO5	97	33.538	Mandrillus_leucophaeus
ENSKMAG00000009488	REXO5	99	62.968	ENSMAMG00000006915	REXO5	95	62.968	Mastacembelus_armatus
ENSKMAG00000009488	REXO5	99	57.214	ENSMZEG00005013657	REXO5	99	57.214	Maylandia_zebra
ENSKMAG00000009488	REXO5	92	34.407	ENSMGAG00000010369	REXO5	98	34.407	Meleagris_gallopavo
ENSKMAG00000009488	REXO5	98	33.051	ENSMICG00000014886	REXO5	99	33.051	Microcebus_murinus
ENSKMAG00000009488	REXO5	51	38.369	ENSMOCG00000010062	-	91	38.369	Microtus_ochrogaster
ENSKMAG00000009488	REXO5	66	52.434	ENSMMOG00000011330	-	97	53.371	Mola_mola
ENSKMAG00000009488	REXO5	97	33.454	ENSMODG00000007059	REXO5	92	33.454	Monodelphis_domestica
ENSKMAG00000009488	REXO5	98	31.158	MGP_CAROLIEiJ_G0030385	-	98	31.158	Mus_caroli
ENSKMAG00000009488	REXO5	98	30.693	ENSMUSG00000030924	Rexo5	98	30.693	Mus_musculus
ENSKMAG00000009488	REXO5	98	30.788	MGP_SPRETEiJ_G0031499	-	98	30.788	Mus_spretus
ENSKMAG00000009488	REXO5	91	34.560	ENSMPUG00000013643	REXO5	90	34.560	Mustela_putorius_furo
ENSKMAG00000009488	REXO5	92	33.508	ENSNGAG00000002025	-	98	33.508	Nannospalax_galili
ENSKMAG00000009488	REXO5	70	51.127	ENSNBRG00000006877	REXO5	92	51.127	Neolamprologus_brichardi
ENSKMAG00000009488	REXO5	99	33.052	ENSNLEG00000012334	REXO5	99	33.052	Nomascus_leucogenys
ENSKMAG00000009488	REXO5	91	33.156	ENSMEUG00000015298	REXO5	97	33.156	Notamacropus_eugenii
ENSKMAG00000009488	REXO5	87	32.374	ENSOPRG00000011398	REXO5	87	32.374	Ochotona_princeps
ENSKMAG00000009488	REXO5	99	57.836	ENSONIG00000000148	REXO5	100	60.381	Oreochromis_niloticus
ENSKMAG00000009488	REXO5	91	36.126	ENSOANG00000014291	REXO5	97	36.126	Ornithorhynchus_anatinus
ENSKMAG00000009488	REXO5	97	33.863	ENSOCUG00000009913	REXO5	96	33.863	Oryctolagus_cuniculus
ENSKMAG00000009488	REXO5	99	62.252	ENSORLG00000009738	REXO5	100	62.252	Oryzias_latipes
ENSKMAG00000009488	REXO5	99	62.825	ENSORLG00020010270	REXO5	100	62.825	Oryzias_latipes_hni
ENSKMAG00000009488	REXO5	99	62.701	ENSORLG00015009678	REXO5	100	62.701	Oryzias_latipes_hsok
ENSKMAG00000009488	REXO5	97	61.401	ENSOMEG00000019491	REXO5	99	61.278	Oryzias_melastigma
ENSKMAG00000009488	REXO5	98	31.912	ENSOGAG00000011564	REXO5	97	31.912	Otolemur_garnettii
ENSKMAG00000009488	REXO5	99	33.495	ENSOARG00000013401	REXO5	99	33.374	Ovis_aries
ENSKMAG00000009488	REXO5	98	32.964	ENSPPAG00000035005	REXO5	97	32.964	Pan_paniscus
ENSKMAG00000009488	REXO5	92	33.464	ENSPPRG00000022345	REXO5	91	33.464	Panthera_pardus
ENSKMAG00000009488	REXO5	92	33.898	ENSPTIG00000012096	REXO5	91	33.898	Panthera_tigris_altaica
ENSKMAG00000009488	REXO5	98	33.210	ENSPTRG00000007851	REXO5	97	33.210	Pan_troglodytes
ENSKMAG00000009488	REXO5	98	33.538	ENSPANG00000006898	REXO5	97	33.538	Papio_anubis
ENSKMAG00000009488	REXO5	99	41.320	ENSPKIG00000014406	REXO5	99	41.320	Paramormyrops_kingsleyae
ENSKMAG00000009488	REXO5	92	34.531	ENSPSIG00000012172	REXO5	92	34.531	Pelodiscus_sinensis
ENSKMAG00000009488	REXO5	94	45.340	ENSPCIG00000029238	-	98	33.769	Phascolarctos_cinereus
ENSKMAG00000009488	REXO5	99	61.899	ENSPFOG00000012767	REXO5	99	62.145	Poecilia_formosa
ENSKMAG00000009488	REXO5	99	61.652	ENSPLAG00000006408	REXO5	99	61.899	Poecilia_latipinna
ENSKMAG00000009488	REXO5	99	61.899	ENSPMEG00000007726	REXO5	99	62.145	Poecilia_mexicana
ENSKMAG00000009488	REXO5	99	61.652	ENSPREG00000000146	REXO5	99	61.652	Poecilia_reticulata
ENSKMAG00000009488	REXO5	91	33.903	ENSPPYG00000007163	REXO5	90	33.903	Pongo_abelii
ENSKMAG00000009488	REXO5	89	34.011	ENSPCAG00000006265	REXO5	97	34.011	Procavia_capensis
ENSKMAG00000009488	REXO5	98	33.132	ENSPCOG00000018775	REXO5	99	33.132	Propithecus_coquereli
ENSKMAG00000009488	REXO5	91	34.731	ENSPVAG00000003293	REXO5	96	34.731	Pteropus_vampyrus
ENSKMAG00000009488	REXO5	84	54.466	ENSPNYG00000006922	REXO5	95	57.413	Pundamilia_nyererei
ENSKMAG00000009488	REXO5	98	40.564	ENSPNAG00000018866	-	99	40.564	Pygocentrus_nattereri
ENSKMAG00000009488	REXO5	99	30.891	ENSRNOG00000014513	Rexo5	99	30.891	Rattus_norvegicus
ENSKMAG00000009488	REXO5	91	34.420	ENSRBIG00000035163	REXO5	81	34.420	Rhinopithecus_bieti
ENSKMAG00000009488	REXO5	91	34.420	ENSRROG00000034741	REXO5	91	34.420	Rhinopithecus_roxellana
ENSKMAG00000009488	REXO5	91	33.896	ENSSBOG00000029650	REXO5	96	34.273	Saimiri_boliviensis_boliviensis
ENSKMAG00000009488	REXO5	98	34.230	ENSSHAG00000005042	REXO5	98	33.692	Sarcophilus_harrisii
ENSKMAG00000009488	REXO5	94	41.902	ENSSFOG00015007581	REXO5	95	41.902	Scleropages_formosus
ENSKMAG00000009488	REXO5	99	63.471	ENSSMAG00000000709	REXO5	99	63.592	Scophthalmus_maximus
ENSKMAG00000009488	REXO5	97	66.667	ENSSDUG00000014528	REXO5	99	66.087	Seriola_dumerili
ENSKMAG00000009488	REXO5	97	66.497	ENSSLDG00000007641	REXO5	98	65.750	Seriola_lalandi_dorsalis
ENSKMAG00000009488	REXO5	52	72.995	ENSSPAG00000007050	-	81	72.340	Stegastes_partitus
ENSKMAG00000009488	REXO5	95	33.920	ENSSSCG00000007855	REXO5	95	34.328	Sus_scrofa
ENSKMAG00000009488	REXO5	91	35.649	ENSTGUG00000009219	REXO5	96	35.649	Taeniopygia_guttata
ENSKMAG00000009488	REXO5	99	58.128	ENSTRUG00000015295	-	98	58.128	Takifugu_rubripes
ENSKMAG00000009488	REXO5	65	33.394	ENSTBEG00000008797	REXO5	70	33.394	Tupaia_belangeri
ENSKMAG00000009488	REXO5	91	33.947	ENSTTRG00000016439	REXO5	90	33.816	Tursiops_truncatus
ENSKMAG00000009488	REXO5	87	33.053	ENSUAMG00000017756	REXO5	99	33.053	Ursus_americanus
ENSKMAG00000009488	REXO5	92	33.725	ENSVVUG00000023257	REXO5	91	33.725	Vulpes_vulpes
ENSKMAG00000009488	REXO5	94	32.900	ENSXETG00000016735	rexo5	98	32.900	Xenopus_tropicalis
ENSKMAG00000009488	REXO5	92	47.089	ENSXCOG00000015997	REXO5	97	47.282	Xiphophorus_couchianus
ENSKMAG00000009488	REXO5	99	63.164	ENSXMAG00000014770	REXO5	99	63.164	Xiphophorus_maculatus