EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSKMAG00000009489 (Gene tree)
Gene ID
108238637
Gene Symbol
-
Alias
-
Full Name
transcriptional repressor scratch 1-like
Gene Type
protein_coding
Species
Kryptolebias_marmoratus
Status
putative
Strand
Minus strand
Length
12259 bases
Position
chrLWHD01000003.1:8053702-8065960
Accession
108238637
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSKMAP00000012643zf-C2H2PF00096.265.3e-2514
ENSKMAP00000012643zf-C2H2PF00096.265.3e-2524
ENSKMAP00000012643zf-C2H2PF00096.265.3e-2534
ENSKMAP00000012643zf-C2H2PF00096.265.3e-2544
ENSKMAP00000012643zf-metPF12874.71.3e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSKMAT00000012828-5546XM_017420861ENSKMAP00000012643299 (aa)XP_017276350UPI0007F9420E
Gene Model
Click here to download ENSKMAG00000009489's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000009489's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSKMAG00000009489-5238.095ENSKMAG00000002448-8038.095
ENSKMAG00000009489-5441.176ENSKMAG00000007657-5441.176
ENSKMAG00000009489-5236.364ENSKMAG00000000689-9636.364
ENSKMAG00000009489-10060.061ENSKMAG00000018087scrt29960.061
ENSKMAG00000009489-6839.316ENSKMAG00000000529-8039.316
ENSKMAG00000009489-6435.965ENSKMAG00000000520-6935.965
ENSKMAG00000009489-5442.857ENSKMAG00000011111-9852.542
ENSKMAG00000009489-5340.909ENSKMAG00000002583-9240.909
ENSKMAG00000009489-5142.466ENSKMAG00000006231-9342.466
ENSKMAG00000009489-5134.586ENSKMAG00000018636-7734.586
ENSKMAG00000009489-6840.909ENSKMAG00000005747-8140.146
ENSKMAG00000009489-8332.847ENSKMAG00000000668-7732.847
ENSKMAG00000009489-5131.746ENSKMAG00000011850-5332.000
ENSKMAG00000009489-6434.091ENSKMAG00000015304-7434.091
ENSKMAG00000009489-5337.313ENSKMAG00000006450-8637.313
ENSKMAG00000009489-5341.739ENSKMAG00000019130-7841.739
ENSKMAG00000009489-6436.154ENSKMAG00000020339-6936.154
ENSKMAG00000009489-6333.824ENSKMAG00000000718-9634.014
ENSKMAG00000009489-6146.154ENSKMAG00000007249znf319b6146.154
ENSKMAG00000009489-6940.678ENSKMAG00000011031-6742.857
ENSKMAG00000009489-5539.604ENSKMAG00000016333-8444.444
ENSKMAG00000009489-5937.500ENSKMAG00000001192-7337.500
ENSKMAG00000009489-7036.029ENSKMAG00000002032-6836.029
ENSKMAG00000009489-6434.343ENSKMAG00000020025-9333.929
ENSKMAG00000009489-8341.441ENSKMAG00000009979-6736.634
ENSKMAG00000009489-5038.168ENSKMAG00000004290-6538.168
ENSKMAG00000009489-5136.036ENSKMAG00000009522-5536.036
ENSKMAG00000009489-5934.109ENSKMAG00000003186-8234.109
ENSKMAG00000009489-6333.333ENSKMAG00000000556-6033.333
ENSKMAG00000009489-5540.385ENSKMAG00000003766-8743.750
ENSKMAG00000009489-5836.641ENSKMAG00000001186-5836.364
ENSKMAG00000009489-5334.965ENSKMAG00000004732zbtb415334.965
ENSKMAG00000009489-5044.000ENSKMAG00000021817znf2365144.000
ENSKMAG00000009489-5734.711ENSKMAG00000007699-7934.711
ENSKMAG00000009489-5738.889ENSKMAG00000021194-7638.889
ENSKMAG00000009489-6630.556ENSKMAG00000011689zic16630.357
ENSKMAG00000009489-5135.484ENSKMAG00000018648-5735.484
ENSKMAG00000009489-9346.835ENSKMAG00000003940-9650.000
ENSKMAG00000009489-5137.624ENSKMAG00000000597-9837.879
ENSKMAG00000009489-5136.029ENSKMAG00000001171-7236.029
ENSKMAG00000009489-5438.636ENSKMAG00000017095-5438.636
ENSKMAG00000009489-5142.667ENSKMAG00000001084-6342.667
ENSKMAG00000009489-5033.333ENSKMAG00000012909-5833.929
ENSKMAG00000009489-5044.595ENSKMAG00000014629-6032.258
ENSKMAG00000009489-5044.872ENSKMAG00000009015-6644.872
ENSKMAG00000009489-5139.394ENSKMAG00000006633-6639.394
ENSKMAG00000009489-6033.333ENSKMAG00000007892-6133.333
ENSKMAG00000009489-6737.594ENSKMAG00000000795-9944.776
ENSKMAG00000009489-6446.053ENSKMAG00000000371-8341.259
ENSKMAG00000009489-9976.000ENSKMAG00000005484scrt1b9974.333
ENSKMAG00000009489-6538.806ENSKMAG00000021716-6038.806
ENSKMAG00000009489-5540.000ENSKMAG00000000543-9437.121
ENSKMAG00000009489-5340.299ENSKMAG00000013745-6440.299
ENSKMAG00000009489-5136.364ENSKMAG00000009563-7145.283
ENSKMAG00000009489-5235.669ENSKMAG00000013663prdm56936.364
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSKMAG00000009489-10088.040ENSAPOG00000015197-10088.040Acanthochromis_polyacanthus
ENSKMAG00000009489-9976.000ENSAPOG00000009279scrt1b9974.333Acanthochromis_polyacanthus
ENSKMAG00000009489-9762.162ENSAPOG00000003680scrt29959.756Acanthochromis_polyacanthus
ENSKMAG00000009489-9753.994ENSACIG00000001296-9653.698Amphilophus_citrinellus
ENSKMAG00000009489-10095.017ENSACIG00000006586-10095.017Amphilophus_citrinellus
ENSKMAG00000009489-9761.409ENSACIG00000012604scrt29661.409Amphilophus_citrinellus
ENSKMAG00000009489-9974.247ENSACIG00000013613scrt1b9972.575Amphilophus_citrinellus
ENSKMAG00000009489-10094.352ENSAOCG00000023304-10094.352Amphiprion_ocellaris
ENSKMAG00000009489-9762.162ENSAOCG00000021557scrt29959.756Amphiprion_ocellaris
ENSKMAG00000009489-9976.000ENSAOCG00000003910scrt1b9974.333Amphiprion_ocellaris
ENSKMAG00000009489-10094.352ENSAPEG00000005677-10094.352Amphiprion_percula
ENSKMAG00000009489-9762.162ENSAPEG00000022558scrt29959.756Amphiprion_percula
ENSKMAG00000009489-9975.667ENSAPEG00000000869scrt1b9974.000Amphiprion_percula
ENSKMAG00000009489-9975.585ENSATEG00000002302scrt1b9975.000Anabas_testudineus
ENSKMAG00000009489-9751.642ENSATEG00000003195-9750.448Anabas_testudineus
ENSKMAG00000009489-10059.574ENSATEG00000023998scrt29960.182Anabas_testudineus
ENSKMAG00000009489-10086.047ENSATEG00000011660-10086.047Anabas_testudineus
ENSKMAG00000009489-6978.155ENSACAG00000016109SCRT29178.155Anolis_carolinensis
ENSKMAG00000009489-10091.475ENSACLG00000012046-10091.475Astatotilapia_calliptera
ENSKMAG00000009489-9975.667ENSACLG00000007162scrt1b9974.000Astatotilapia_calliptera
ENSKMAG00000009489-9979.866ENSAMXG00000038085scrt1a9977.258Astyanax_mexicanus
ENSKMAG00000009489-8467.857ENSAMXG00000034158scrt27179.602Astyanax_mexicanus
ENSKMAG00000009489-9973.333ENSAMXG00000042624SCRT110071.667Astyanax_mexicanus
ENSKMAG00000009489-5560.000WBGene00000468ces-16158.824Caenorhabditis_elegans
ENSKMAG00000009489-9975.251ENSCPBG00000018899SCRT19973.244Chrysemys_picta_bellii
ENSKMAG00000009489-8756.506ENSCPBG00000027613SCRT210055.435Chrysemys_picta_bellii
ENSKMAG00000009489-10059.752ENSCSEG00000021542scrt29959.752Cynoglossus_semilaevis
ENSKMAG00000009489-9974.582ENSCSEG00000008596scrt1b9973.667Cynoglossus_semilaevis
ENSKMAG00000009489-10091.694ENSCSEG00000014892-10091.694Cynoglossus_semilaevis
ENSKMAG00000009489-10058.841ENSCVAG00000021038scrt29958.841Cyprinodon_variegatus
ENSKMAG00000009489-10094.352ENSCVAG00000003190-10094.352Cyprinodon_variegatus
ENSKMAG00000009489-9976.333ENSCVAG00000009561scrt1b9974.667Cyprinodon_variegatus
ENSKMAG00000009489-9978.523ENSDARG00000100821scrt1a9977.258Danio_rerio
ENSKMAG00000009489-9976.174ENSDARG00000040214scrt1b9974.497Danio_rerio
ENSKMAG00000009489-9662.013ENSELUG00000023883scrt29560.635Esox_lucius
ENSKMAG00000009489-10077.076ENSELUG00000022228scrt1a10075.083Esox_lucius
ENSKMAG00000009489-9977.778ENSELUG00000005435scrt1b9876.094Esox_lucius
ENSKMAG00000009489-6777.228ENSFALG00000005718SCRT28377.723Ficedula_albicollis
ENSKMAG00000009489-10063.123ENSFHEG00000005732scrt29664.041Fundulus_heteroclitus
ENSKMAG00000009489-10094.684ENSFHEG00000009794-10094.684Fundulus_heteroclitus
ENSKMAG00000009489-9976.000ENSFHEG00000014820scrt1b9974.333Fundulus_heteroclitus
ENSKMAG00000009489-9756.289ENSGMOG00000019519scrt29656.289Gadus_morhua
ENSKMAG00000009489-9975.251ENSGMOG00000000629scrt1b9973.579Gadus_morhua
ENSKMAG00000009489-5596.825ENSGMOG00000013833-5696.825Gadus_morhua
ENSKMAG00000009489-6579.487ENSGALG00000028912SCRT29761.644Gallus_gallus
ENSKMAG00000009489-9976.333ENSGAFG00000007636scrt1b9974.667Gambusia_affinis
ENSKMAG00000009489-10085.284ENSGAFG00000009650-10084.281Gambusia_affinis
ENSKMAG00000009489-10061.076ENSGAFG00000003093scrt29961.076Gambusia_affinis
ENSKMAG00000009489-10088.040ENSGACG00000004072-10088.040Gasterosteus_aculeatus
ENSKMAG00000009489-9973.737ENSGACG00000008982scrt1b9972.054Gasterosteus_aculeatus
ENSKMAG00000009489-6080.447ENSGAGG00000020760-6881.006Gopherus_agassizii
ENSKMAG00000009489-9660.690ENSGAGG00000020761SCRT29661.111Gopherus_agassizii
ENSKMAG00000009489-9976.094ENSGAGG00000011736SCRT19974.411Gopherus_agassizii
ENSKMAG00000009489-10094.352ENSHBUG00000019101-10094.352Haplochromis_burtoni
ENSKMAG00000009489-9762.162ENSHBUG00000012492scrt29662.162Haplochromis_burtoni
ENSKMAG00000009489-9975.667ENSHBUG00000016621scrt1b9974.000Haplochromis_burtoni
ENSKMAG00000009489-10073.115ENSHCOG00000016179-10072.581Hippocampus_comes
ENSKMAG00000009489-9760.912ENSHCOG00000008116scrt29760.912Hippocampus_comes
ENSKMAG00000009489-9975.333ENSHCOG00000016704scrt1b9973.667Hippocampus_comes
ENSKMAG00000009489-9970.946ENSIPUG00000005547-10069.257Ictalurus_punctatus
ENSKMAG00000009489-9877.365ENSIPUG00000004551scrt1a9976.689Ictalurus_punctatus
ENSKMAG00000009489-10091.639ENSLBEG00000023388-10091.639Labrus_bergylta
ENSKMAG00000009489-10058.788ENSLBEG00000015419scrt29959.394Labrus_bergylta
ENSKMAG00000009489-9974.916ENSLACG00000003588SCRT19973.244Latimeria_chalumnae
ENSKMAG00000009489-9754.037ENSLOCG00000002246scrt29753.870Lepisosteus_oculatus
ENSKMAG00000009489-9977.258ENSLOCG00000007573scrt1b9975.585Lepisosteus_oculatus
ENSKMAG00000009489-9691.852ENSMFAG00000035496SCRT19289.655Macaca_fascicularis
ENSKMAG00000009489-10059.394ENSMAMG00000001291scrt29959.271Mastacembelus_armatus
ENSKMAG00000009489-9974.916ENSMAMG00000011698scrt1b9974.333Mastacembelus_armatus
ENSKMAG00000009489-10094.352ENSMZEG00005026702-10094.352Maylandia_zebra
ENSKMAG00000009489-9762.162ENSMZEG00005026445scrt29662.162Maylandia_zebra
ENSKMAG00000009489-9975.667ENSMZEG00005005627scrt1b9974.000Maylandia_zebra
ENSKMAG00000009489-6579.487ENSMGAG00000016579SCRT28079.487Meleagris_gallopavo
ENSKMAG00000009489-10091.391ENSMMOG00000018345-10091.391Mola_mola
ENSKMAG00000009489-9975.000ENSMMOG00000003327scrt1b9973.333Mola_mola
ENSKMAG00000009489-10059.756ENSMMOG00000009272scrt29959.816Mola_mola
ENSKMAG00000009489-9761.565ENSMALG00000013656scrt29661.565Monopterus_albus
ENSKMAG00000009489-9975.585ENSMALG00000012704scrt1b9975.000Monopterus_albus
ENSKMAG00000009489-5182.119ENSNGAG00000020815Scrt29167.895Nannospalax_galili
ENSKMAG00000009489-10060.984ENSNBRG00000007221scrt29661.824Neolamprologus_brichardi
ENSKMAG00000009489-9973.244ENSNBRG00000013983scrt1b9971.572Neolamprologus_brichardi
ENSKMAG00000009489-10094.684ENSNBRG00000014882-10094.684Neolamprologus_brichardi
ENSKMAG00000009489-9790.554ENSONIG00000019809-10090.554Oreochromis_niloticus
ENSKMAG00000009489-9975.667ENSONIG00000006007scrt1b9974.000Oreochromis_niloticus
ENSKMAG00000009489-10059.146ENSONIG00000016758scrt29959.756Oreochromis_niloticus
ENSKMAG00000009489-9757.143ENSONIG00000003152-9657.241Oreochromis_niloticus
ENSKMAG00000009489-9975.251ENSORLG00000025651scrt1b9974.333Oryzias_latipes
ENSKMAG00000009489-10090.759ENSORLG00000022825-10090.759Oryzias_latipes
ENSKMAG00000009489-9760.502ENSORLG00000024051scrt29760.502Oryzias_latipes
ENSKMAG00000009489-9760.502ENSORLG00020011478scrt29760.502Oryzias_latipes_hni
ENSKMAG00000009489-9975.251ENSORLG00020012967scrt1b9974.333Oryzias_latipes_hni
ENSKMAG00000009489-9760.502ENSORLG00015005524scrt29760.502Oryzias_latipes_hsok
ENSKMAG00000009489-9975.251ENSORLG00015019165scrt1b9974.333Oryzias_latipes_hsok
ENSKMAG00000009489-10091.089ENSORLG00015010104-10091.089Oryzias_latipes_hsok
ENSKMAG00000009489-10091.973ENSOMEG00000000286-10091.973Oryzias_melastigma
ENSKMAG00000009489-9975.251ENSOMEG00000003925scrt1b9974.333Oryzias_melastigma
ENSKMAG00000009489-9760.815ENSOMEG00000002661scrt29760.815Oryzias_melastigma
ENSKMAG00000009489-9976.589ENSPKIG00000022303SCRT19974.916Paramormyrops_kingsleyae
ENSKMAG00000009489-9977.926ENSPKIG00000020085scrt1a9976.589Paramormyrops_kingsleyae
ENSKMAG00000009489-9972.575ENSPMGG00000002260scrt1b9970.903Periophthalmus_magnuspinnatus
ENSKMAG00000009489-10063.576ENSPMGG00000016561scrt29962.706Periophthalmus_magnuspinnatus
ENSKMAG00000009489-10088.040ENSPMGG00000021402-10088.040Periophthalmus_magnuspinnatus
ENSKMAG00000009489-10059.146ENSPFOG00000007738scrt29959.146Poecilia_formosa
ENSKMAG00000009489-10094.983ENSPFOG00000005616-10094.983Poecilia_formosa
ENSKMAG00000009489-9976.333ENSPFOG00000017719scrt1b9974.667Poecilia_formosa
ENSKMAG00000009489-10094.983ENSPLAG00000011718-10094.983Poecilia_latipinna
ENSKMAG00000009489-9976.333ENSPLAG00000009876scrt1b9974.667Poecilia_latipinna
ENSKMAG00000009489-10063.934ENSPLAG00000005765scrt29963.934Poecilia_latipinna
ENSKMAG00000009489-10094.983ENSPMEG00000011706-10094.983Poecilia_mexicana
ENSKMAG00000009489-10063.934ENSPMEG00000001538scrt29963.934Poecilia_mexicana
ENSKMAG00000009489-9976.333ENSPMEG00000013274scrt1b9974.667Poecilia_mexicana
ENSKMAG00000009489-9976.333ENSPREG00000018985scrt1b9974.667Poecilia_reticulata
ENSKMAG00000009489-10094.314ENSPREG00000012166-10094.314Poecilia_reticulata
ENSKMAG00000009489-10059.146ENSPREG00000001147scrt29959.146Poecilia_reticulata
ENSKMAG00000009489-9762.162ENSPNYG00000013109scrt29662.162Pundamilia_nyererei
ENSKMAG00000009489-10094.020ENSPNYG00000008865-10094.020Pundamilia_nyererei
ENSKMAG00000009489-9975.667ENSPNYG00000017733scrt1b9974.000Pundamilia_nyererei
ENSKMAG00000009489-9973.579ENSPNAG00000027880-10072.241Pygocentrus_nattereri
ENSKMAG00000009489-9978.859ENSPNAG00000017415scrt1a9976.923Pygocentrus_nattereri
ENSKMAG00000009489-9976.923ENSSFOG00015001195SCRT19975.251Scleropages_formosus
ENSKMAG00000009489-10089.803ENSSMAG00000005122-10089.803Scophthalmus_maximus
ENSKMAG00000009489-10075.415ENSSMAG00000019207scrt1b10073.754Scophthalmus_maximus
ENSKMAG00000009489-10095.017ENSSDUG00000013215-10095.017Seriola_dumerili
ENSKMAG00000009489-9976.333ENSSDUG00000007752scrt1b9974.667Seriola_dumerili
ENSKMAG00000009489-10059.752ENSSDUG00000001637scrt29860.062Seriola_dumerili
ENSKMAG00000009489-10058.967ENSSLDG00000013565scrt29959.271Seriola_lalandi_dorsalis
ENSKMAG00000009489-9976.333ENSSLDG00000017166scrt1b9974.667Seriola_lalandi_dorsalis
ENSKMAG00000009489-10095.017ENSSLDG00000016454-10095.017Seriola_lalandi_dorsalis
ENSKMAG00000009489-9761.034ENSSPUG00000018637SCRT29760.690Sphenodon_punctatus
ENSKMAG00000009489-9976.333ENSSPAG00000002200scrt1b9974.667Stegastes_partitus
ENSKMAG00000009489-10061.639ENSSPAG00000014018scrt29662.500Stegastes_partitus
ENSKMAG00000009489-10095.349ENSSPAG00000006788-10095.349Stegastes_partitus
ENSKMAG00000009489-6777.114ENSTGUG00000006801SCRT28677.612Taeniopygia_guttata
ENSKMAG00000009489-8780.695ENSTRUG00000019558-8179.151Takifugu_rubripes
ENSKMAG00000009489-9761.270ENSTRUG00000007620scrt29761.270Takifugu_rubripes
ENSKMAG00000009489-9975.920ENSTRUG00000011637scrt1b10074.247Takifugu_rubripes
ENSKMAG00000009489-10089.369ENSTRUG00000012719-10089.369Takifugu_rubripes
ENSKMAG00000009489-9975.667ENSTNIG00000018384scrt1b9974.000Tetraodon_nigroviridis
ENSKMAG00000009489-10062.914ENSTNIG00000012473scrt29763.823Tetraodon_nigroviridis
ENSKMAG00000009489-10060.692ENSXCOG00000014367scrt29960.692Xiphophorus_couchianus
ENSKMAG00000009489-10084.615ENSXCOG00000019861-10083.612Xiphophorus_couchianus
ENSKMAG00000009489-9976.667ENSXCOG00000019675scrt1b9975.000Xiphophorus_couchianus
ENSKMAG00000009489-9976.667ENSXMAG00000027885scrt1b9975.000Xiphophorus_maculatus
ENSKMAG00000009489-10094.314ENSXMAG00000015353-10094.314Xiphophorus_maculatus
ENSKMAG00000009489-10058.788ENSXMAG00000028567scrt29958.788Xiphophorus_maculatus

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