EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000009494 (Gene tree)
Gene ID: 108233884
Gene Symbol: msi2a
Alias: cb746|fi47b09|msi2|wu:fb02d08|wu:fi32d12|wu:fi47b09
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 280628 bases
Position: chrLWHD01000023.1:75662-356289
Accession: 108233884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000012766	RRM_1	PF00076.22	2.1e-33	1	2
ENSKMAP00000012766	RRM_1	PF00076.22	2.1e-33	2	2
ENSKMAP00000012733	RRM_1	PF00076.22	3.4e-33	1	2
ENSKMAP00000012733	RRM_1	PF00076.22	3.4e-33	2	2
ENSKMAP00000012709	RRM_1	PF00076.22	3.4e-33	1	2
ENSKMAP00000012709	RRM_1	PF00076.22	3.4e-33	2	2
ENSKMAP00000012805	RRM_1	PF00076.22	6.3e-29	1	2
ENSKMAP00000012805	RRM_1	PF00076.22	6.3e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000012997	-	1134	-	ENSKMAP00000012805	377 (aa)	-	-
ENSKMAT00000012956	-	3635	-	ENSKMAP00000012766	328 (aa)	-	-
ENSKMAT00000012921	-	3815	XM_017412629	ENSKMAP00000012733	388 (aa)	XP_017268118	-
ENSKMAT00000012895	-	3886	XM_017412626	ENSKMAP00000012709	388 (aa)	XP_017268115	UPI0007F92FB2

Gene Model

Click here to download ENSKMAG00000009494's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000009494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000009494	msi2a	55	40.217	ENSKMAG00000015973	hnrnpa3	91	34.737
ENSKMAG00000009494	msi2a	53	41.279	ENSKMAG00000020859	-	60	40.415
ENSKMAG00000009494	msi2a	53	49.425	ENSKMAG00000005188	hnrnpaba	69	47.423
ENSKMAG00000009494	msi2a	98	69.388	ENSKMAG00000011251	MSI1	97	69.388
ENSKMAG00000009494	msi2a	53	48.851	ENSKMAG00000003831	-	69	46.927
ENSKMAG00000009494	msi2a	57	46.277	ENSKMAG00000004310	hnrnpd	71	46.561
ENSKMAG00000009494	msi2a	91	73.841	ENSKMAG00000019877	-	96	73.841
ENSKMAG00000009494	msi2a	52	36.047	ENSKMAG00000010760	-	88	31.985

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000009494	msi2a	96	91.720	ENSG00000153944	MSI2	96	91.429	Homo_sapiens
ENSKMAG00000009494	msi2a	97	99.602	ENSAPOG00000001658	msi2a	100	99.588	Acanthochromis_polyacanthus
ENSKMAG00000009494	msi2a	89	87.138	ENSAMEG00000002697	MSI2	96	86.859	Ailuropoda_melanoleuca
ENSKMAG00000009494	msi2a	100	98.674	ENSACIG00000009475	msi2a	100	98.674	Amphilophus_citrinellus
ENSKMAG00000009494	msi2a	58	81.333	ENSAOCG00000014822	msi2a	69	90.370	Amphiprion_ocellaris
ENSKMAG00000009494	msi2a	96	93.968	ENSAPEG00000007706	msi2a	96	93.968	Amphiprion_percula
ENSKMAG00000009494	msi2a	97	99.602	ENSATEG00000010498	msi2a	100	99.588	Anabas_testudineus
ENSKMAG00000009494	msi2a	89	91.667	ENSATEG00000003301	-	95	91.667	Anabas_testudineus
ENSKMAG00000009494	msi2a	84	92.935	ENSACAG00000005452	MSI2	88	80.791	Anolis_carolinensis
ENSKMAG00000009494	msi2a	96	91.720	ENSANAG00000037827	MSI2	96	91.429	Aotus_nancymaae
ENSKMAG00000009494	msi2a	100	94.349	ENSACLG00000007752	msi2a	100	99.177	Astatotilapia_calliptera
ENSKMAG00000009494	msi2a	100	92.268	ENSAMXG00000010474	msi2b	100	92.268	Astyanax_mexicanus
ENSKMAG00000009494	msi2a	100	93.059	ENSAMXG00000032796	msi2a	100	93.316	Astyanax_mexicanus
ENSKMAG00000009494	msi2a	94	91.205	ENSBTAG00000004406	MSI2	97	91.205	Bos_taurus
ENSKMAG00000009494	msi2a	71	58.635	WBGene00003423	msi-1	73	61.638	Caenorhabditis_elegans
ENSKMAG00000009494	msi2a	96	91.720	ENSCJAG00000013998	MSI2	96	91.429	Callithrix_jacchus
ENSKMAG00000009494	msi2a	89	86.441	ENSCAFG00020025620	MSI2	78	85.294	Canis_lupus_dingo
ENSKMAG00000009494	msi2a	96	90.764	ENSCHIG00000016580	MSI2	96	90.476	Capra_hircus
ENSKMAG00000009494	msi2a	89	86.940	ENSCPOG00000034042	MSI2	95	86.617	Cavia_porcellus
ENSKMAG00000009494	msi2a	96	91.720	ENSCCAG00000033927	MSI2	96	91.429	Cebus_capucinus
ENSKMAG00000009494	msi2a	94	91.469	ENSCATG00000040879	MSI2	96	91.111	Cercocebus_atys
ENSKMAG00000009494	msi2a	96	86.747	ENSCLAG00000014325	MSI2	96	86.486	Chinchilla_lanigera
ENSKMAG00000009494	msi2a	96	91.720	ENSCSAG00000005633	MSI2	96	91.429	Chlorocebus_sabaeus
ENSKMAG00000009494	msi2a	90	65.000	ENSCHOG00000008660	MSI2	83	84.314	Choloepus_hoffmanni
ENSKMAG00000009494	msi2a	90	93.596	ENSCPBG00000009942	MSI2	96	83.768	Chrysemys_picta_bellii
ENSKMAG00000009494	msi2a	87	53.171	ENSCING00000018579	-	90	52.153	Ciona_intestinalis
ENSKMAG00000009494	msi2a	61	67.290	ENSCSAVG00000010397	-	67	67.943	Ciona_savignyi
ENSKMAG00000009494	msi2a	94	91.469	ENSCANG00000036414	MSI2	91	93.274	Colobus_angolensis_palliatus
ENSKMAG00000009494	msi2a	96	91.111	ENSCGRG00001013330	Msi2	96	90.823	Cricetulus_griseus_chok1gshd
ENSKMAG00000009494	msi2a	89	86.859	ENSCGRG00000003141	Msi2	96	86.581	Cricetulus_griseus_crigri
ENSKMAG00000009494	msi2a	72	79.006	ENSCSEG00000013557	msi2a	73	88.462	Cynoglossus_semilaevis
ENSKMAG00000009494	msi2a	57	77.596	ENSCSEG00000013549	msi2a	100	77.596	Cynoglossus_semilaevis
ENSKMAG00000009494	msi2a	96	79.365	ENSCSEG00000003266	-	96	79.365	Cynoglossus_semilaevis
ENSKMAG00000009494	msi2a	100	99.227	ENSCVAG00000017075	msi2a	100	99.588	Cyprinodon_variegatus
ENSKMAG00000009494	msi2a	100	89.433	ENSDARG00000033901	msi2a	100	89.433	Danio_rerio
ENSKMAG00000009494	msi2a	93	96.813	ENSDARG00000032614	msi2b	100	96.429	Danio_rerio
ENSKMAG00000009494	msi2a	89	91.971	ENSDNOG00000014501	MSI2	95	91.636	Dasypus_novemcinctus
ENSKMAG00000009494	msi2a	51	95.575	ENSDORG00000028440	-	100	95.575	Dipodomys_ordii
ENSKMAG00000009494	msi2a	72	79.781	ENSDORG00000005394	Msi2	79	79.348	Dipodomys_ordii
ENSKMAG00000009494	msi2a	89	56.615	FBgn0260943	Rbp6	88	65.278	Drosophila_melanogaster
ENSKMAG00000009494	msi2a	67	71.711	ENSETEG00000012450	-	64	71.711	Echinops_telfairi
ENSKMAG00000009494	msi2a	94	57.022	ENSEBUG00000006732	msi2a	83	66.892	Eptatretus_burgeri
ENSKMAG00000009494	msi2a	89	92.058	ENSEASG00005002965	MSI2	97	78.400	Equus_asinus_asinus
ENSKMAG00000009494	msi2a	100	83.898	ENSECAG00000011435	MSI2	100	83.898	Equus_caballus
ENSKMAG00000009494	msi2a	82	76.285	ENSEEUG00000007810	MSI2	100	76.285	Erinaceus_europaeus
ENSKMAG00000009494	msi2a	100	91.139	ENSELUG00000001361	msi2b	100	91.139	Esox_lucius
ENSKMAG00000009494	msi2a	96	94.400	ENSELUG00000011747	msi2a	96	94.293	Esox_lucius
ENSKMAG00000009494	msi2a	96	91.720	ENSFCAG00000041686	MSI2	96	91.429	Felis_catus
ENSKMAG00000009494	msi2a	52	70.874	ENSFCAG00000033787	-	82	74.359	Felis_catus
ENSKMAG00000009494	msi2a	89	87.138	ENSFDAG00000016118	MSI2	96	86.859	Fukomys_damarensis
ENSKMAG00000009494	msi2a	97	99.602	ENSFHEG00000000084	msi2a	100	94.840	Fundulus_heteroclitus
ENSKMAG00000009494	msi2a	55	96.154	ENSGMOG00000007596	-	100	96.154	Gadus_morhua
ENSKMAG00000009494	msi2a	96	85.843	ENSGALG00000005567	MSI2	96	85.586	Gallus_gallus
ENSKMAG00000009494	msi2a	96	85.938	ENSGAFG00000006974	msi2a	99	100.000	Gambusia_affinis
ENSKMAG00000009494	msi2a	96	88.679	ENSGAGG00000016542	MSI2	100	81.907	Gopherus_agassizii
ENSKMAG00000009494	msi2a	94	91.469	ENSGGOG00000013182	MSI2	91	93.274	Gorilla_gorilla
ENSKMAG00000009494	msi2a	97	99.203	ENSHBUG00000020800	msi2a	100	99.177	Haplochromis_burtoni
ENSKMAG00000009494	msi2a	96	77.410	ENSHGLG00000012444	MSI2	96	77.177	Heterocephalus_glaber_female
ENSKMAG00000009494	msi2a	51	95.614	ENSHGLG00100004028	-	87	95.614	Heterocephalus_glaber_male
ENSKMAG00000009494	msi2a	69	81.959	ENSHGLG00100003744	MSI2	94	81.959	Heterocephalus_glaber_male
ENSKMAG00000009494	msi2a	100	93.366	ENSHCOG00000000266	msi2a	100	93.366	Hippocampus_comes
ENSKMAG00000009494	msi2a	95	81.439	ENSHCOG00000017241	-	98	70.324	Hippocampus_comes
ENSKMAG00000009494	msi2a	93	94.672	ENSIPUG00000021097	msi2a	100	94.650	Ictalurus_punctatus
ENSKMAG00000009494	msi2a	100	91.753	ENSIPUG00000003732	msi2b	100	91.753	Ictalurus_punctatus
ENSKMAG00000009494	msi2a	89	86.940	ENSSTOG00000007884	MSI2	95	86.617	Ictidomys_tridecemlineatus
ENSKMAG00000009494	msi2a	69	76.344	ENSJJAG00000006292	-	93	76.344	Jaculus_jaculus
ENSKMAG00000009494	msi2a	51	95.575	ENSJJAG00000009467	-	100	95.575	Jaculus_jaculus
ENSKMAG00000009494	msi2a	97	99.602	ENSLBEG00000007061	msi2a	100	94.349	Labrus_bergylta
ENSKMAG00000009494	msi2a	97	76.657	ENSLBEG00000026223	-	100	77.551	Labrus_bergylta
ENSKMAG00000009494	msi2a	52	91.765	ENSLACG00000016798	MSI2	98	92.308	Latimeria_chalumnae
ENSKMAG00000009494	msi2a	100	93.557	ENSLOCG00000004675	msi2b	100	93.557	Lepisosteus_oculatus
ENSKMAG00000009494	msi2a	94	91.469	ENSMFAG00000003775	MSI2	91	93.274	Macaca_fascicularis
ENSKMAG00000009494	msi2a	94	91.469	ENSMMUG00000002069	MSI2	91	93.274	Macaca_mulatta
ENSKMAG00000009494	msi2a	96	91.720	ENSMNEG00000045275	MSI2	96	91.429	Macaca_nemestrina
ENSKMAG00000009494	msi2a	94	91.469	ENSMLEG00000033888	MSI2	91	93.274	Mandrillus_leucophaeus
ENSKMAG00000009494	msi2a	97	99.602	ENSMAMG00000010503	msi2a	100	99.588	Mastacembelus_armatus
ENSKMAG00000009494	msi2a	96	94.422	ENSMAMG00000002488	-	99	93.377	Mastacembelus_armatus
ENSKMAG00000009494	msi2a	97	99.203	ENSMZEG00005007676	msi2a	100	99.177	Maylandia_zebra
ENSKMAG00000009494	msi2a	96	86.186	ENSMAUG00000003862	Msi2	96	85.928	Mesocricetus_auratus
ENSKMAG00000009494	msi2a	96	71.473	ENSMICG00000032913	-	96	72.812	Microcebus_murinus
ENSKMAG00000009494	msi2a	100	90.854	ENSMICG00000013598	-	100	90.854	Microcebus_murinus
ENSKMAG00000009494	msi2a	96	86.446	ENSMOCG00000005820	Msi2	96	86.186	Microtus_ochrogaster
ENSKMAG00000009494	msi2a	90	91.156	ENSMMOG00000008348	msi2a	90	99.270	Mola_mola
ENSKMAG00000009494	msi2a	69	81.443	ENSMODG00000014790	MSI2	94	81.443	Monodelphis_domestica
ENSKMAG00000009494	msi2a	100	98.693	ENSMALG00000000071	msi2a	100	99.588	Monopterus_albus
ENSKMAG00000009494	msi2a	96	91.401	MGP_CAROLIEiJ_G0016948	Msi2	100	95.575	Mus_caroli
ENSKMAG00000009494	msi2a	96	91.401	ENSMUSG00000069769	Msi2	100	95.575	Mus_musculus
ENSKMAG00000009494	msi2a	96	91.401	MGP_PahariEiJ_G0018079	Msi2	100	95.575	Mus_pahari
ENSKMAG00000009494	msi2a	96	91.401	MGP_SPRETEiJ_G0017795	Msi2	100	95.575	Mus_spretus
ENSKMAG00000009494	msi2a	89	92.491	ENSMPUG00000015377	MSI2	93	92.177	Mustela_putorius_furo
ENSKMAG00000009494	msi2a	89	92.150	ENSMLUG00000007865	MSI2	93	91.837	Myotis_lucifugus
ENSKMAG00000009494	msi2a	96	86.446	ENSNGAG00000017807	Msi2	96	86.186	Nannospalax_galili
ENSKMAG00000009494	msi2a	100	98.969	ENSNBRG00000014596	msi2a	100	98.969	Neolamprologus_brichardi
ENSKMAG00000009494	msi2a	88	91.469	ENSNLEG00000008059	MSI2	95	92.823	Nomascus_leucogenys
ENSKMAG00000009494	msi2a	67	82.895	ENSOPRG00000000872	-	64	82.895	Ochotona_princeps
ENSKMAG00000009494	msi2a	96	86.747	ENSODEG00000011974	MSI2	96	86.486	Octodon_degus
ENSKMAG00000009494	msi2a	58	99.338	ENSONIG00000001972	msi2a	84	99.338	Oreochromis_niloticus
ENSKMAG00000009494	msi2a	88	91.915	ENSOANG00000005667	MSI2	99	75.414	Ornithorhynchus_anatinus
ENSKMAG00000009494	msi2a	89	92.491	ENSOCUG00000010440	MSI2	93	92.177	Oryctolagus_cuniculus
ENSKMAG00000009494	msi2a	100	99.227	ENSORLG00000009671	msi2a	100	99.588	Oryzias_latipes
ENSKMAG00000009494	msi2a	97	99.602	ENSORLG00020021556	msi2a	100	99.588	Oryzias_latipes_hni
ENSKMAG00000009494	msi2a	100	99.227	ENSORLG00015004592	msi2a	100	99.588	Oryzias_latipes_hsok
ENSKMAG00000009494	msi2a	100	99.227	ENSOMEG00000000146	msi2a	100	99.588	Oryzias_melastigma
ENSKMAG00000009494	msi2a	89	88.737	ENSOGAG00000005621	MSI2	95	88.435	Otolemur_garnettii
ENSKMAG00000009494	msi2a	89	87.097	ENSPPAG00000037697	MSI2	91	93.274	Pan_paniscus
ENSKMAG00000009494	msi2a	89	92.491	ENSPPRG00000001848	MSI2	91	93.274	Panthera_pardus
ENSKMAG00000009494	msi2a	89	86.532	ENSPTIG00000021678	MSI2	92	86.242	Panthera_tigris_altaica
ENSKMAG00000009494	msi2a	72	75.105	ENSPTIG00000021873	-	90	75.105	Panthera_tigris_altaica
ENSKMAG00000009494	msi2a	94	91.469	ENSPTRG00000009437	MSI2	91	93.274	Pan_troglodytes
ENSKMAG00000009494	msi2a	96	91.720	ENSPANG00000022319	MSI2	96	91.429	Papio_anubis
ENSKMAG00000009494	msi2a	96	89.172	ENSPKIG00000007038	-	96	93.004	Paramormyrops_kingsleyae
ENSKMAG00000009494	msi2a	96	94.318	ENSPSIG00000008618	MSI2	100	85.714	Pelodiscus_sinensis
ENSKMAG00000009494	msi2a	96	93.333	ENSPMGG00000005888	msi2a	96	93.333	Periophthalmus_magnuspinnatus
ENSKMAG00000009494	msi2a	51	95.575	ENSPEMG00000021793	-	100	95.575	Peromyscus_maniculatus_bairdii
ENSKMAG00000009494	msi2a	100	84.463	ENSPCIG00000006063	MSI2	100	84.463	Phascolarctos_cinereus
ENSKMAG00000009494	msi2a	57	98.095	ENSPFOG00000019337	MSI2	92	98.095	Poecilia_formosa
ENSKMAG00000009494	msi2a	58	99.265	ENSPLAG00000000436	msi2a	76	95.775	Poecilia_latipinna
ENSKMAG00000009494	msi2a	58	88.235	ENSPMEG00000013247	msi2a	75	99.174	Poecilia_mexicana
ENSKMAG00000009494	msi2a	100	94.595	ENSPREG00000000881	msi2a	100	94.595	Poecilia_reticulata
ENSKMAG00000009494	msi2a	89	88.393	ENSPPYG00000008244	-	94	88.000	Pongo_abelii
ENSKMAG00000009494	msi2a	82	60.889	ENSPCAG00000010552	MSI2	95	60.889	Procavia_capensis
ENSKMAG00000009494	msi2a	52	94.656	ENSPCOG00000019195	-	93	94.656	Propithecus_coquereli
ENSKMAG00000009494	msi2a	89	83.871	ENSPVAG00000017053	MSI2	99	85.938	Pteropus_vampyrus
ENSKMAG00000009494	msi2a	96	98.730	ENSPNYG00000018393	msi2a	100	99.177	Pundamilia_nyererei
ENSKMAG00000009494	msi2a	100	93.573	ENSPNAG00000014957	msi2a	100	93.573	Pygocentrus_nattereri
ENSKMAG00000009494	msi2a	100	92.031	ENSPNAG00000000844	msi2b	100	92.031	Pygocentrus_nattereri
ENSKMAG00000009494	msi2a	89	91.667	ENSRNOG00000025338	Msi2	95	91.321	Rattus_norvegicus
ENSKMAG00000009494	msi2a	52	95.614	ENSRROG00000034421	-	92	95.614	Rhinopithecus_roxellana
ENSKMAG00000009494	msi2a	88	91.905	ENSSBOG00000026425	MSI2	91	93.274	Saimiri_boliviensis_boliviensis
ENSKMAG00000009494	msi2a	89	87.097	ENSSHAG00000008672	MSI2	96	86.817	Sarcophilus_harrisii
ENSKMAG00000009494	msi2a	89	88.737	ENSSFOG00015021687	-	97	93.243	Scleropages_formosus
ENSKMAG00000009494	msi2a	100	72.059	ENSSFOG00015012168	msi2b	100	72.059	Scleropages_formosus
ENSKMAG00000009494	msi2a	97	99.602	ENSSMAG00000018484	msi2a	100	99.588	Scophthalmus_maximus
ENSKMAG00000009494	msi2a	100	94.349	ENSSDUG00000014507	msi2a	100	99.588	Seriola_dumerili
ENSKMAG00000009494	msi2a	96	83.025	ENSSDUG00000021968	-	99	93.377	Seriola_dumerili
ENSKMAG00000009494	msi2a	97	99.602	ENSSLDG00000017172	msi2a	100	99.588	Seriola_lalandi_dorsalis
ENSKMAG00000009494	msi2a	58	91.772	ENSSPUG00000000913	-	94	91.772	Sphenodon_punctatus
ENSKMAG00000009494	msi2a	97	99.602	ENSSPAG00000017793	msi2a	100	99.588	Stegastes_partitus
ENSKMAG00000009494	msi2a	100	90.854	ENSSSCG00000038505	MSI2	100	93.004	Sus_scrofa
ENSKMAG00000009494	msi2a	69	82.383	ENSTGUG00000008452	MSI2	94	81.959	Taeniopygia_guttata
ENSKMAG00000009494	msi2a	93	98.805	ENSTRUG00000021248	msi2a	95	93.655	Takifugu_rubripes
ENSKMAG00000009494	msi2a	74	77.273	ENSTBEG00000001241	MSI2	73	77.273	Tupaia_belangeri
ENSKMAG00000009494	msi2a	89	83.036	ENSTTRG00000002189	MSI2	91	94.079	Tursiops_truncatus
ENSKMAG00000009494	msi2a	89	92.491	ENSUAMG00000000700	MSI2	93	92.177	Ursus_americanus
ENSKMAG00000009494	msi2a	94	83.813	ENSUMAG00000000505	MSI2	100	93.264	Ursus_maritimus
ENSKMAG00000009494	msi2a	55	81.319	ENSVPAG00000006837	-	62	81.319	Vicugna_pacos
ENSKMAG00000009494	msi2a	96	92.058	ENSVVUG00000011783	MSI2	97	91.244	Vulpes_vulpes
ENSKMAG00000009494	msi2a	100	97.423	ENSXCOG00000006113	msi2a	100	97.423	Xiphophorus_couchianus
ENSKMAG00000009494	msi2a	100	94.840	ENSXMAG00000000608	msi2a	100	100.000	Xiphophorus_maculatus