EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000009681 (Gene tree)
Gene ID: 108234264
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 4627 bases
Position: chrLWHD01000026.1:3405145-3409771
Accession: 108234264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000012920	MMR_HSR1	PF01926.23	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000013113	-	1851	XM_017413317	ENSKMAP00000012920	616 (aa)	XP_017268806	-

Gene Model

Click here to download ENSKMAG00000009681's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000009681's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000009681	lsg1	51	31.863	ENSKMAG00000020874	gnl3l	54	31.863
ENSKMAG00000009681	lsg1	65	33.738	ENSKMAG00000009059	gnl1	65	33.738

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000009681	lsg1	99	63.238	ENSG00000041802	LSG1	90	75.776	Homo_sapiens
ENSKMAG00000009681	lsg1	100	78.481	ENSAPOG00000009694	lsg1	99	78.837	Acanthochromis_polyacanthus
ENSKMAG00000009681	lsg1	100	62.121	ENSAMEG00000009343	LSG1	98	62.442	Ailuropoda_melanoleuca
ENSKMAG00000009681	lsg1	98	79.450	ENSACIG00000012406	lsg1	98	79.450	Amphilophus_citrinellus
ENSKMAG00000009681	lsg1	100	78.515	ENSAOCG00000016066	lsg1	99	78.710	Amphiprion_ocellaris
ENSKMAG00000009681	lsg1	100	78.515	ENSAPEG00000003252	lsg1	99	78.871	Amphiprion_percula
ENSKMAG00000009681	lsg1	98	77.352	ENSATEG00000011794	lsg1	98	77.512	Anabas_testudineus
ENSKMAG00000009681	lsg1	95	59.404	ENSACAG00000004222	LSG1	100	60.856	Anolis_carolinensis
ENSKMAG00000009681	lsg1	99	63.374	ENSANAG00000021153	LSG1	98	63.721	Aotus_nancymaae
ENSKMAG00000009681	lsg1	100	76.959	ENSACLG00000000520	lsg1	98	76.646	Astatotilapia_calliptera
ENSKMAG00000009681	lsg1	100	70.170	ENSAMXG00000008271	lsg1	98	72.240	Astyanax_mexicanus
ENSKMAG00000009681	lsg1	99	62.883	ENSBTAG00000008461	LSG1	98	63.380	Bos_taurus
ENSKMAG00000009681	lsg1	84	41.040	WBGene00016907	C53H9.2	79	44.386	Caenorhabditis_elegans
ENSKMAG00000009681	lsg1	99	62.766	ENSCJAG00000013962	LSG1	98	63.101	Callithrix_jacchus
ENSKMAG00000009681	lsg1	95	64.115	ENSCAFG00000013445	LSG1	100	64.115	Canis_familiaris
ENSKMAG00000009681	lsg1	100	62.273	ENSCAFG00020002216	LSG1	99	63.344	Canis_lupus_dingo
ENSKMAG00000009681	lsg1	100	63.134	ENSCHIG00000015769	LSG1	98	63.722	Capra_hircus
ENSKMAG00000009681	lsg1	99	62.048	ENSTSYG00000001447	LSG1	98	62.000	Carlito_syrichta
ENSKMAG00000009681	lsg1	94	63.262	ENSCAPG00000009856	LSG1	99	63.621	Cavia_aperea
ENSKMAG00000009681	lsg1	99	62.918	ENSCCAG00000035744	LSG1	98	63.256	Cebus_capucinus
ENSKMAG00000009681	lsg1	99	63.678	ENSCATG00000042060	LSG1	98	62.791	Cercocebus_atys
ENSKMAG00000009681	lsg1	99	63.374	ENSCSAG00000008796	LSG1	90	63.721	Chlorocebus_sabaeus
ENSKMAG00000009681	lsg1	100	63.897	ENSCPBG00000015941	LSG1	82	64.099	Chrysemys_picta_bellii
ENSKMAG00000009681	lsg1	84	48.077	ENSCING00000007079	-	97	48.515	Ciona_intestinalis
ENSKMAG00000009681	lsg1	84	49.711	ENSCSAVG00000002514	-	98	49.222	Ciona_savignyi
ENSKMAG00000009681	lsg1	99	62.766	ENSCANG00000030709	LSG1	98	63.256	Colobus_angolensis_palliatus
ENSKMAG00000009681	lsg1	99	64.577	ENSCGRG00001019846	Lsg1	98	64.960	Cricetulus_griseus_chok1gshd
ENSKMAG00000009681	lsg1	99	63.580	ENSCGRG00000014617	Lsg1	98	64.409	Cricetulus_griseus_crigri
ENSKMAG00000009681	lsg1	98	76.800	ENSCSEG00000008522	lsg1	98	76.800	Cynoglossus_semilaevis
ENSKMAG00000009681	lsg1	97	78.339	ENSCVAG00000002484	lsg1	98	78.930	Cyprinodon_variegatus
ENSKMAG00000009681	lsg1	100	71.582	ENSDARG00000015352	lsg1	98	73.365	Danio_rerio
ENSKMAG00000009681	lsg1	99	62.709	ENSDNOG00000006224	LSG1	98	62.733	Dasypus_novemcinctus
ENSKMAG00000009681	lsg1	99	49.128	FBgn0266284	Ns3	98	49.510	Drosophila_melanogaster
ENSKMAG00000009681	lsg1	87	70.667	ENSETEG00000003888	LSG1	87	74.194	Echinops_telfairi
ENSKMAG00000009681	lsg1	88	56.477	ENSEBUG00000003119	lsg1	85	56.131	Eptatretus_burgeri
ENSKMAG00000009681	lsg1	99	63.102	ENSEASG00005000678	LSG1	98	63.158	Equus_asinus_asinus
ENSKMAG00000009681	lsg1	99	62.556	ENSECAG00000017659	LSG1	98	63.003	Equus_caballus
ENSKMAG00000009681	lsg1	86	58.120	ENSEEUG00000015217	LSG1	85	58.120	Erinaceus_europaeus
ENSKMAG00000009681	lsg1	100	73.333	ENSELUG00000023973	lsg1	98	73.744	Esox_lucius
ENSKMAG00000009681	lsg1	100	61.818	ENSFCAG00000024957	LSG1	98	61.978	Felis_catus
ENSKMAG00000009681	lsg1	92	61.327	ENSFALG00000007210	LSG1	94	61.812	Ficedula_albicollis
ENSKMAG00000009681	lsg1	99	62.617	ENSFDAG00000017373	LSG1	98	62.798	Fukomys_damarensis
ENSKMAG00000009681	lsg1	97	79.585	ENSFHEG00000003680	lsg1	98	79.524	Fundulus_heteroclitus
ENSKMAG00000009681	lsg1	98	66.352	ENSGMOG00000015834	lsg1	98	66.352	Gadus_morhua
ENSKMAG00000009681	lsg1	99	59.193	ENSGALG00000007058	LSG1	86	59.571	Gallus_gallus
ENSKMAG00000009681	lsg1	97	80.033	ENSGAFG00000015831	lsg1	98	79.967	Gambusia_affinis
ENSKMAG00000009681	lsg1	98	76.145	ENSGACG00000009323	lsg1	98	76.145	Gasterosteus_aculeatus
ENSKMAG00000009681	lsg1	99	63.070	ENSGGOG00000000520	LSG1	98	63.411	Gorilla_gorilla
ENSKMAG00000009681	lsg1	100	77.605	ENSHBUG00000005659	lsg1	98	77.302	Haplochromis_burtoni
ENSKMAG00000009681	lsg1	99	63.233	ENSHGLG00000017390	LSG1	98	63.269	Heterocephalus_glaber_female
ENSKMAG00000009681	lsg1	99	63.233	ENSHGLG00100018587	LSG1	98	63.269	Heterocephalus_glaber_male
ENSKMAG00000009681	lsg1	97	74.281	ENSHCOG00000016848	lsg1	98	74.404	Hippocampus_comes
ENSKMAG00000009681	lsg1	100	72.425	ENSIPUG00000008631	lsg1	98	71.750	Ictalurus_punctatus
ENSKMAG00000009681	lsg1	74	57.000	ENSSTOG00000010234	LSG1	92	57.800	Ictidomys_tridecemlineatus
ENSKMAG00000009681	lsg1	99	64.835	ENSJJAG00000015513	Lsg1	98	64.904	Jaculus_jaculus
ENSKMAG00000009681	lsg1	98	79.305	ENSLBEG00000024261	lsg1	98	79.305	Labrus_bergylta
ENSKMAG00000009681	lsg1	100	63.528	ENSLACG00000013399	LSG1	98	63.859	Latimeria_chalumnae
ENSKMAG00000009681	lsg1	98	67.852	ENSLOCG00000004918	lsg1	98	68.643	Lepisosteus_oculatus
ENSKMAG00000009681	lsg1	99	63.003	ENSLAFG00000012919	-	98	63.507	Loxodonta_africana
ENSKMAG00000009681	lsg1	99	63.374	ENSMFAG00000039903	LSG1	98	62.481	Macaca_fascicularis
ENSKMAG00000009681	lsg1	99	63.374	ENSMMUG00000010708	LSG1	98	63.721	Macaca_mulatta
ENSKMAG00000009681	lsg1	99	63.374	ENSMNEG00000031538	LSG1	98	62.481	Macaca_nemestrina
ENSKMAG00000009681	lsg1	99	63.222	ENSMLEG00000041184	LSG1	98	63.566	Mandrillus_leucophaeus
ENSKMAG00000009681	lsg1	100	76.677	ENSMAMG00000000470	lsg1	98	76.998	Mastacembelus_armatus
ENSKMAG00000009681	lsg1	100	77.760	ENSMZEG00005017865	lsg1	98	77.460	Maylandia_zebra
ENSKMAG00000009681	lsg1	88	60.304	ENSMGAG00000007050	LSG1	99	60.980	Meleagris_gallopavo
ENSKMAG00000009681	lsg1	95	61.601	ENSMAUG00000016976	Lsg1	95	61.809	Mesocricetus_auratus
ENSKMAG00000009681	lsg1	99	61.782	ENSMICG00000049087	LSG1	98	62.830	Microcebus_murinus
ENSKMAG00000009681	lsg1	99	62.558	ENSMOCG00000022136	Lsg1	98	63.522	Microtus_ochrogaster
ENSKMAG00000009681	lsg1	98	76.451	ENSMMOG00000008884	lsg1	98	76.617	Mola_mola
ENSKMAG00000009681	lsg1	99	54.893	ENSMODG00000019828	LSG1	98	54.268	Monodelphis_domestica
ENSKMAG00000009681	lsg1	100	64.496	MGP_CAROLIEiJ_G0020648	Lsg1	98	64.873	Mus_caroli
ENSKMAG00000009681	lsg1	100	64.142	ENSMUSG00000022538	Lsg1	98	64.715	Mus_musculus
ENSKMAG00000009681	lsg1	98	63.950	MGP_PahariEiJ_G0016352	Lsg1	98	65.409	Mus_pahari
ENSKMAG00000009681	lsg1	100	63.524	MGP_SPRETEiJ_G0021544	Lsg1	98	64.353	Mus_spretus
ENSKMAG00000009681	lsg1	100	62.481	ENSMPUG00000003734	LSG1	98	62.809	Mustela_putorius_furo
ENSKMAG00000009681	lsg1	100	63.567	ENSMLUG00000012548	LSG1	98	63.919	Myotis_lucifugus
ENSKMAG00000009681	lsg1	99	61.796	ENSNGAG00000021872	Lsg1	98	62.677	Nannospalax_galili
ENSKMAG00000009681	lsg1	99	63.526	ENSNLEG00000008293	LSG1	98	63.876	Nomascus_leucogenys
ENSKMAG00000009681	lsg1	70	69.072	ENSMEUG00000009041	-	84	69.072	Notamacropus_eugenii
ENSKMAG00000009681	lsg1	100	77.280	ENSONIG00000002635	lsg1	98	76.887	Oreochromis_niloticus
ENSKMAG00000009681	lsg1	95	66.504	ENSOANG00000012742	LSG1	99	66.341	Ornithorhynchus_anatinus
ENSKMAG00000009681	lsg1	99	61.760	ENSOCUG00000004817	LSG1	98	61.765	Oryctolagus_cuniculus
ENSKMAG00000009681	lsg1	98	78.418	ENSORLG00000007695	lsg1	98	78.418	Oryzias_latipes
ENSKMAG00000009681	lsg1	98	77.236	ENSORLG00020016286	lsg1	98	78.084	Oryzias_latipes_hni
ENSKMAG00000009681	lsg1	98	78.713	ENSORLG00015012025	lsg1	98	77.886	Oryzias_latipes_hsok
ENSKMAG00000009681	lsg1	98	77.723	ENSOMEG00000022379	lsg1	98	77.723	Oryzias_melastigma
ENSKMAG00000009681	lsg1	99	62.387	ENSOGAG00000003475	LSG1	98	62.712	Otolemur_garnettii
ENSKMAG00000009681	lsg1	100	62.175	ENSOARG00000020403	LSG1	98	62.813	Ovis_aries
ENSKMAG00000009681	lsg1	99	63.086	ENSPPAG00000029271	LSG1	98	63.426	Pan_paniscus
ENSKMAG00000009681	lsg1	100	61.562	ENSPPRG00000010281	LSG1	98	61.715	Panthera_pardus
ENSKMAG00000009681	lsg1	100	61.818	ENSPTIG00000010789	LSG1	98	61.978	Panthera_tigris_altaica
ENSKMAG00000009681	lsg1	99	62.935	ENSPTRG00000015760	LSG1	98	63.272	Pan_troglodytes
ENSKMAG00000009681	lsg1	99	63.526	ENSPANG00000018249	LSG1	98	62.636	Papio_anubis
ENSKMAG00000009681	lsg1	99	68.661	ENSPKIG00000002895	lsg1	98	69.404	Paramormyrops_kingsleyae
ENSKMAG00000009681	lsg1	96	60.095	ENSPSIG00000009821	LSG1	99	60.095	Pelodiscus_sinensis
ENSKMAG00000009681	lsg1	95	75.578	ENSPMGG00000000931	lsg1	100	75.578	Periophthalmus_magnuspinnatus
ENSKMAG00000009681	lsg1	99	62.538	ENSPEMG00000012082	-	98	62.871	Peromyscus_maniculatus_bairdii
ENSKMAG00000009681	lsg1	99	59.549	ENSPMAG00000007451	lsg1	98	59.509	Petromyzon_marinus
ENSKMAG00000009681	lsg1	97	66.102	ENSPCIG00000013890	LSG1	78	66.102	Phascolarctos_cinereus
ENSKMAG00000009681	lsg1	97	79.227	ENSPFOG00000021882	lsg1	98	79.327	Poecilia_formosa
ENSKMAG00000009681	lsg1	97	78.422	ENSPLAG00000019536	lsg1	98	78.526	Poecilia_latipinna
ENSKMAG00000009681	lsg1	97	78.491	ENSPMEG00000017281	lsg1	98	78.435	Poecilia_mexicana
ENSKMAG00000009681	lsg1	97	67.563	ENSPREG00000006048	lsg1	98	67.717	Poecilia_reticulata
ENSKMAG00000009681	lsg1	92	62.541	ENSPPYG00000014425	LSG1	98	62.563	Pongo_abelii
ENSKMAG00000009681	lsg1	89	68.000	ENSPCAG00000005511	LSG1	71	72.581	Procavia_capensis
ENSKMAG00000009681	lsg1	99	62.121	ENSPCOG00000012360	LSG1	98	62.074	Propithecus_coquereli
ENSKMAG00000009681	lsg1	100	76.959	ENSPNYG00000021994	lsg1	98	76.646	Pundamilia_nyererei
ENSKMAG00000009681	lsg1	100	72.601	ENSPNAG00000015533	lsg1	98	72.512	Pygocentrus_nattereri
ENSKMAG00000009681	lsg1	100	62.481	ENSRNOG00000001727	Lsg1	98	63.426	Rattus_norvegicus
ENSKMAG00000009681	lsg1	99	62.709	ENSRBIG00000029053	LSG1	98	63.043	Rhinopithecus_bieti
ENSKMAG00000009681	lsg1	99	62.709	ENSRROG00000037702	LSG1	98	63.043	Rhinopithecus_roxellana
ENSKMAG00000009681	lsg1	78	43.434	YGL099W	LSG1	71	42.254	Saccharomyces_cerevisiae
ENSKMAG00000009681	lsg1	99	62.766	ENSSBOG00000034938	LSG1	98	63.256	Saimiri_boliviensis_boliviensis
ENSKMAG00000009681	lsg1	77	60.728	ENSSHAG00000003487	LSG1	100	60.728	Sarcophilus_harrisii
ENSKMAG00000009681	lsg1	98	70.400	ENSSFOG00015008955	lsg1	98	70.720	Scleropages_formosus
ENSKMAG00000009681	lsg1	98	78.605	ENSSDUG00000004622	lsg1	98	78.605	Seriola_dumerili
ENSKMAG00000009681	lsg1	98	80.421	ENSSLDG00000010869	lsg1	98	80.421	Seriola_lalandi_dorsalis
ENSKMAG00000009681	lsg1	85	63.582	ENSSARG00000012981	LSG1	78	63.582	Sorex_araneus
ENSKMAG00000009681	lsg1	100	64.750	ENSSPUG00000016347	LSG1	98	64.451	Sphenodon_punctatus
ENSKMAG00000009681	lsg1	100	77.157	ENSSPAG00000005508	lsg1	99	78.502	Stegastes_partitus
ENSKMAG00000009681	lsg1	100	62.423	ENSSSCG00000011827	LSG1	98	63.349	Sus_scrofa
ENSKMAG00000009681	lsg1	88	60.000	ENSTGUG00000009068	LSG1	100	60.500	Taeniopygia_guttata
ENSKMAG00000009681	lsg1	97	74.920	ENSTRUG00000017380	lsg1	98	74.879	Takifugu_rubripes
ENSKMAG00000009681	lsg1	97	76.898	ENSTNIG00000015570	lsg1	98	76.849	Tetraodon_nigroviridis
ENSKMAG00000009681	lsg1	100	58.104	ENSTTRG00000000559	LSG1	98	58.502	Tursiops_truncatus
ENSKMAG00000009681	lsg1	100	61.991	ENSUAMG00000012454	LSG1	98	62.597	Ursus_americanus
ENSKMAG00000009681	lsg1	100	61.991	ENSUMAG00000000855	LSG1	98	62.597	Ursus_maritimus
ENSKMAG00000009681	lsg1	95	59.585	ENSVPAG00000012400	LSG1	100	59.585	Vicugna_pacos
ENSKMAG00000009681	lsg1	95	63.200	ENSVVUG00000008956	LSG1	97	63.200	Vulpes_vulpes
ENSKMAG00000009681	lsg1	100	64.606	ENSXETG00000003451	lsg1	98	64.000	Xenopus_tropicalis
ENSKMAG00000009681	lsg1	97	78.261	ENSXCOG00000003239	lsg1	98	78.205	Xiphophorus_couchianus
ENSKMAG00000009681	lsg1	97	77.201	ENSXMAG00000005536	lsg1	98	77.308	Xiphophorus_maculatus