EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000009856 (Gene tree)
Gene ID: 108244675
Gene Symbol: zgc:171927
Alias: -
Full Name: ras-related protein ORAB-1-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 3298 bases
Position: chrLWHD01000147.1:284231-287528
Accession: 108244675
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000013144	MMR_HSR1	PF01926.23	5.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000013347	-	645	XM_017431069	ENSKMAP00000013144	214 (aa)	XP_017286558	UPI0007F8BA42

Gene Model

Click here to download ENSKMAG00000009856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000009856's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000009856	zgc:171927	74	33.540	ENSKMAG00000020448	rheb	86	33.540
ENSKMAG00000009856	zgc:171927	82	46.857	ENSKMAG00000020250	rab4a	82	46.857
ENSKMAG00000009856	zgc:171927	98	41.981	ENSKMAG00000015488	rab25b	96	41.981
ENSKMAG00000009856	zgc:171927	79	49.704	ENSKMAG00000009799	rab2a	80	49.704
ENSKMAG00000009856	zgc:171927	73	36.478	ENSKMAG00000012723	rabl2	68	36.478
ENSKMAG00000009856	zgc:171927	80	58.721	ENSKMAG00000001908	rab13	91	57.310
ENSKMAG00000009856	zgc:171927	85	41.361	ENSKMAG00000017417	-	87	41.361
ENSKMAG00000009856	zgc:171927	96	35.849	ENSKMAG00000019647	rab34a	77	35.849
ENSKMAG00000009856	zgc:171927	79	41.209	ENSKMAG00000003105	rab33ba	77	41.209
ENSKMAG00000009856	zgc:171927	75	45.342	ENSKMAG00000020038	rab5c	78	43.860
ENSKMAG00000009856	zgc:171927	78	57.831	ENSKMAG00000003494	si:dkey-16l2.16	99	50.000
ENSKMAG00000009856	zgc:171927	92	75.000	ENSKMAG00000017357	rab1ab	99	75.000
ENSKMAG00000009856	zgc:171927	76	35.758	ENSKMAG00000020733	rras	83	35.758
ENSKMAG00000009856	zgc:171927	75	39.130	ENSKMAG00000011278	rab6bb	77	39.869
ENSKMAG00000009856	zgc:171927	80	47.368	ENSKMAG00000001191	RAB15	81	47.368
ENSKMAG00000009856	zgc:171927	79	38.150	ENSKMAG00000019964	rab9b	84	38.150
ENSKMAG00000009856	zgc:171927	79	52.976	ENSKMAG00000006082	-	77	52.976
ENSKMAG00000009856	zgc:171927	98	41.509	ENSKMAG00000011301	-	97	41.509
ENSKMAG00000009856	zgc:171927	83	31.795	ENSKMAG00000017097	rasl11a	78	31.795
ENSKMAG00000009856	zgc:171927	76	41.916	ENSKMAG00000006593	rab33a	78	41.916
ENSKMAG00000009856	zgc:171927	99	46.919	ENSKMAG00000011905	rab11a	96	46.919
ENSKMAG00000009856	zgc:171927	74	39.877	ENSKMAG00000006812	RAB7A	79	39.877
ENSKMAG00000009856	zgc:171927	100	71.495	ENSKMAG00000006810	rab1ba	100	71.495
ENSKMAG00000009856	zgc:171927	79	41.040	ENSKMAG00000014705	rab22a	87	41.040
ENSKMAG00000009856	zgc:171927	98	41.232	ENSKMAG00000004945	rab25a	96	41.232
ENSKMAG00000009856	zgc:171927	84	43.646	ENSKMAG00000020056	rab12	85	40.000
ENSKMAG00000009856	zgc:171927	79	49.704	ENSKMAG00000020392	rab15	79	49.704
ENSKMAG00000009856	zgc:171927	77	37.126	ENSKMAG00000017893	mras	80	37.126
ENSKMAG00000009856	zgc:171927	79	52.381	ENSKMAG00000006170	-	77	52.381
ENSKMAG00000009856	zgc:171927	74	48.171	ENSKMAG00000002862	zgc:101559	70	48.171
ENSKMAG00000009856	zgc:171927	75	39.130	ENSKMAG00000002545	-	76	39.130
ENSKMAG00000009856	zgc:171927	55	30.252	ENSKMAG00000020210	arl4aa	61	30.252
ENSKMAG00000009856	zgc:171927	73	37.821	ENSKMAG00000018270	rab23	74	35.795
ENSKMAG00000009856	zgc:171927	76	51.220	ENSKMAG00000007364	rab18b	80	51.220
ENSKMAG00000009856	zgc:171927	99	45.972	ENSKMAG00000004439	rab30	97	45.972
ENSKMAG00000009856	zgc:171927	68	42.105	ENSKMAG00000020034	-	52	42.105
ENSKMAG00000009856	zgc:171927	82	44.068	ENSKMAG00000008625	RAB39B	83	44.068
ENSKMAG00000009856	zgc:171927	96	35.922	ENSKMAG00000015507	rab6ba	94	35.922
ENSKMAG00000009856	zgc:171927	96	35.885	ENSKMAG00000019341	rab34b	81	35.885
ENSKMAG00000009856	zgc:171927	55	33.051	ENSKMAG00000002898	arl8a	61	33.051
ENSKMAG00000009856	zgc:171927	71	40.132	ENSKMAG00000013146	-	79	40.132
ENSKMAG00000009856	zgc:171927	91	42.574	ENSKMAG00000017487	rab14	93	42.574
ENSKMAG00000009856	zgc:171927	76	38.415	ENSKMAG00000003938	kras	96	35.519
ENSKMAG00000009856	zgc:171927	77	36.095	ENSKMAG00000017150	-	76	36.095
ENSKMAG00000009856	zgc:171927	80	42.197	ENSKMAG00000007267	rab42a	79	42.197
ENSKMAG00000009856	zgc:171927	76	47.239	ENSKMAG00000005111	rab5aa	75	47.239
ENSKMAG00000009856	zgc:171927	76	37.195	ENSKMAG00000001922	Ha-ras	86	37.195
ENSKMAG00000009856	zgc:171927	98	70.335	ENSKMAG00000014038	-	93	70.335
ENSKMAG00000009856	zgc:171927	88	32.124	ENSKMAG00000003080	si:cabz01085950.1	92	32.124
ENSKMAG00000009856	zgc:171927	80	34.857	ENSKMAG00000021039	si:dkey-13a21.4	73	34.857
ENSKMAG00000009856	zgc:171927	79	31.765	ENSKMAG00000019397	rhebl1	90	31.765
ENSKMAG00000009856	zgc:171927	76	64.815	ENSKMAG00000006854	rab35b	80	64.815
ENSKMAG00000009856	zgc:171927	72	37.107	ENSKMAG00000003646	-	80	37.107
ENSKMAG00000009856	zgc:171927	79	52.381	ENSKMAG00000009033	rab11bb	77	52.381
ENSKMAG00000009856	zgc:171927	98	45.283	ENSKMAG00000012657	-	95	45.283
ENSKMAG00000009856	zgc:171927	91	39.234	ENSKMAG00000012778	si:dkey-34d22.5	94	39.234
ENSKMAG00000009856	zgc:171927	78	38.235	ENSKMAG00000020013	-	83	38.235
ENSKMAG00000009856	zgc:171927	79	46.154	ENSKMAG00000018973	-	76	46.154
ENSKMAG00000009856	zgc:171927	78	37.059	ENSKMAG00000017662	rab9a	83	37.059
ENSKMAG00000009856	zgc:171927	55	30.252	ENSKMAG00000011334	arl4cb	61	30.252
ENSKMAG00000009856	zgc:171927	99	45.498	ENSKMAG00000015516	rab11al	96	45.498

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000009856	zgc:171927	100	93.458	ENSAPOG00000004980	-	100	93.458	Acanthochromis_polyacanthus
ENSKMAG00000009856	zgc:171927	100	92.991	ENSACIG00000009006	zgc:171927	100	92.991	Amphilophus_citrinellus
ENSKMAG00000009856	zgc:171927	71	89.032	ENSAOCG00000013808	-	93	97.521	Amphiprion_ocellaris
ENSKMAG00000009856	zgc:171927	100	91.589	ENSAOCG00000024149	-	100	91.589	Amphiprion_ocellaris
ENSKMAG00000009856	zgc:171927	100	92.056	ENSAPEG00000022171	zgc:171927	99	92.056	Amphiprion_percula
ENSKMAG00000009856	zgc:171927	100	92.523	ENSATEG00000003430	zgc:171927	100	92.523	Anabas_testudineus
ENSKMAG00000009856	zgc:171927	100	92.523	ENSACLG00000013734	-	100	92.523	Astatotilapia_calliptera
ENSKMAG00000009856	zgc:171927	100	78.605	ENSAMXG00000039486	zgc:171927	100	78.605	Astyanax_mexicanus
ENSKMAG00000009856	zgc:171927	100	89.252	ENSCSEG00000014416	zgc:171927	100	89.252	Cynoglossus_semilaevis
ENSKMAG00000009856	zgc:171927	100	93.925	ENSCVAG00000009222	zgc:171927	100	93.925	Cyprinodon_variegatus
ENSKMAG00000009856	zgc:171927	100	78.140	ENSDARG00000033056	zgc:171927	100	78.140	Danio_rerio
ENSKMAG00000009856	zgc:171927	94	81.188	ENSELUG00000011680	zgc:171927	99	78.605	Esox_lucius
ENSKMAG00000009856	zgc:171927	100	93.925	ENSFHEG00000022176	zgc:171927	100	93.925	Fundulus_heteroclitus
ENSKMAG00000009856	zgc:171927	98	81.991	ENSGMOG00000004979	-	97	81.991	Gadus_morhua
ENSKMAG00000009856	zgc:171927	98	92.344	ENSGAFG00000015702	zgc:171927	84	92.344	Gambusia_affinis
ENSKMAG00000009856	zgc:171927	100	91.589	ENSGACG00000013401	zgc:171927	99	91.589	Gasterosteus_aculeatus
ENSKMAG00000009856	zgc:171927	100	92.523	ENSHBUG00000002397	-	100	92.523	Haplochromis_burtoni
ENSKMAG00000009856	zgc:171927	98	89.952	ENSLBEG00000027226	-	89	89.952	Labrus_bergylta
ENSKMAG00000009856	zgc:171927	100	90.654	ENSLBEG00000005791	-	100	90.654	Labrus_bergylta
ENSKMAG00000009856	zgc:171927	98	72.857	ENSLOCG00000014692	zgc:171927	96	72.857	Lepisosteus_oculatus
ENSKMAG00000009856	zgc:171927	100	90.187	ENSMAMG00000020135	zgc:171927	100	90.187	Mastacembelus_armatus
ENSKMAG00000009856	zgc:171927	100	92.523	ENSMZEG00005024685	-	100	92.523	Maylandia_zebra
ENSKMAG00000009856	zgc:171927	100	85.981	ENSMMOG00000009833	-	100	85.981	Mola_mola
ENSKMAG00000009856	zgc:171927	100	90.187	ENSMALG00000021129	zgc:171927	100	90.187	Monopterus_albus
ENSKMAG00000009856	zgc:171927	100	92.056	ENSNBRG00000006202	zgc:171927	100	92.056	Neolamprologus_brichardi
ENSKMAG00000009856	zgc:171927	100	90.654	ENSORLG00000000602	zgc:171927	100	90.654	Oryzias_latipes
ENSKMAG00000009856	zgc:171927	100	90.654	ENSORLG00020021071	zgc:171927	100	90.654	Oryzias_latipes_hni
ENSKMAG00000009856	zgc:171927	100	90.654	ENSORLG00015010098	zgc:171927	100	90.654	Oryzias_latipes_hsok
ENSKMAG00000009856	zgc:171927	100	91.121	ENSOMEG00000020594	zgc:171927	100	91.121	Oryzias_melastigma
ENSKMAG00000009856	zgc:171927	100	92.523	ENSPFOG00000013810	zgc:171927	99	92.523	Poecilia_formosa
ENSKMAG00000009856	zgc:171927	100	91.589	ENSPLAG00000005869	zgc:171927	100	91.589	Poecilia_latipinna
ENSKMAG00000009856	zgc:171927	100	92.523	ENSPMEG00000022350	zgc:171927	100	92.523	Poecilia_mexicana
ENSKMAG00000009856	zgc:171927	100	93.458	ENSPREG00000017517	zgc:171927	100	93.458	Poecilia_reticulata
ENSKMAG00000009856	zgc:171927	100	92.523	ENSPNYG00000007520	-	100	92.523	Pundamilia_nyererei
ENSKMAG00000009856	zgc:171927	100	78.605	ENSPNAG00000029574	zgc:171927	100	78.605	Pygocentrus_nattereri
ENSKMAG00000009856	zgc:171927	100	77.570	ENSSFOG00015005464	zgc:171927	98	77.570	Scleropages_formosus
ENSKMAG00000009856	zgc:171927	100	87.850	ENSSMAG00000004416	-	100	87.850	Scophthalmus_maximus
ENSKMAG00000009856	zgc:171927	100	93.458	ENSSDUG00000004445	zgc:171927	100	93.458	Seriola_dumerili
ENSKMAG00000009856	zgc:171927	100	93.458	ENSSLDG00000018024	zgc:171927	100	93.458	Seriola_lalandi_dorsalis
ENSKMAG00000009856	zgc:171927	100	92.523	ENSSPAG00000013533	zgc:171927	100	92.523	Stegastes_partitus
ENSKMAG00000009856	zgc:171927	100	93.925	ENSXCOG00000010695	zgc:171927	100	93.925	Xiphophorus_couchianus
ENSKMAG00000009856	zgc:171927	100	93.925	ENSXMAG00000004683	zgc:171927	100	93.925	Xiphophorus_maculatus