EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000009914 (Gene tree)
Gene ID: 108237759
Gene Symbol: ddx42
Alias: im:7148194|si:dkey-15n1.10|zgc:111815
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 6809 bases
Position: chrLWHD01000048.1:2320599-2327407
Accession: 108237759
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000013243	ResIII	PF04851.15	1e-06	1	1
ENSKMAP00000013281	ResIII	PF04851.15	2e-06	1	1
ENSKMAP00000013281	DEAD	PF00270.29	3.1e-48	1	1
ENSKMAP00000013243	DEAD	PF00270.29	3.3e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000013484	-	2592	-	ENSKMAP00000013281	863 (aa)	-	-
ENSKMAT00000013446	-	3445	XM_017419410	ENSKMAP00000013243	909 (aa)	XP_017274899	UPI0007F87792

Gene Model

Click here to download ENSKMAG00000009914's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000009914's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000009914	ddx42	52	36.538	ENSKMAG00000011081	-	68	36.538
ENSKMAG00000009914	ddx42	51	40.741	ENSKMAG00000019331	DDX41	72	40.741
ENSKMAG00000009914	ddx42	52	36.797	ENSKMAG00000012439	ddx4	69	36.797
ENSKMAG00000009914	ddx42	65	41.667	ENSKMAG00000019510	ddx46	53	41.493
ENSKMAG00000009914	ddx42	51	37.953	ENSKMAG00000012633	-	70	36.238
ENSKMAG00000009914	ddx42	53	40.928	ENSKMAG00000011257	DDX5	86	38.628

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000009914	ddx42	99	71.188	ENSG00000198231	DDX42	100	78.095	Homo_sapiens
ENSKMAG00000009914	ddx42	91	92.289	ENSAPOG00000017675	ddx42	98	89.408	Acanthochromis_polyacanthus
ENSKMAG00000009914	ddx42	99	72.516	ENSAMEG00000003200	DDX42	100	69.947	Ailuropoda_melanoleuca
ENSKMAG00000009914	ddx42	85	86.563	ENSACIG00000007376	ddx42	99	88.258	Amphilophus_citrinellus
ENSKMAG00000009914	ddx42	100	87.405	ENSAOCG00000003520	ddx42	100	89.371	Amphiprion_ocellaris
ENSKMAG00000009914	ddx42	100	87.121	ENSAPEG00000000984	ddx42	100	89.588	Amphiprion_percula
ENSKMAG00000009914	ddx42	100	89.640	ENSATEG00000022920	ddx42	100	89.422	Anabas_testudineus
ENSKMAG00000009914	ddx42	99	71.610	ENSAPLG00000010544	DDX42	84	79.214	Anas_platyrhynchos
ENSKMAG00000009914	ddx42	99	72.611	ENSACAG00000003994	DDX42	99	68.783	Anolis_carolinensis
ENSKMAG00000009914	ddx42	99	72.582	ENSANAG00000035693	DDX42	92	79.638	Aotus_nancymaae
ENSKMAG00000009914	ddx42	100	82.873	ENSACLG00000025113	ddx42	100	88.974	Astatotilapia_calliptera
ENSKMAG00000009914	ddx42	87	80.653	ENSAMXG00000011435	ddx42	100	76.176	Astyanax_mexicanus
ENSKMAG00000009914	ddx42	99	71.022	ENSBTAG00000021058	DDX42	92	78.884	Bos_taurus
ENSKMAG00000009914	ddx42	66	53.375	WBGene00008119	C46F11.4	79	53.560	Caenorhabditis_elegans
ENSKMAG00000009914	ddx42	99	72.689	ENSCJAG00000019649	DDX42	97	81.722	Callithrix_jacchus
ENSKMAG00000009914	ddx42	99	72.063	ENSCAFG00000012818	DDX42	99	69.430	Canis_familiaris
ENSKMAG00000009914	ddx42	99	72.063	ENSCAFG00020026631	DDX42	99	69.430	Canis_lupus_dingo
ENSKMAG00000009914	ddx42	99	72.912	ENSCHIG00000014431	DDX42	100	70.811	Capra_hircus
ENSKMAG00000009914	ddx42	100	70.846	ENSTSYG00000001380	DDX42	100	69.375	Carlito_syrichta
ENSKMAG00000009914	ddx42	74	60.763	ENSCAPG00000013621	DDX42	87	63.371	Cavia_aperea
ENSKMAG00000009914	ddx42	99	72.034	ENSCPOG00000005633	DDX42	99	70.851	Cavia_porcellus
ENSKMAG00000009914	ddx42	99	68.264	ENSCCAG00000020612	DDX42	92	79.758	Cebus_capucinus
ENSKMAG00000009914	ddx42	99	71.970	ENSCATG00000030490	DDX42	99	69.789	Cercocebus_atys
ENSKMAG00000009914	ddx42	99	72.487	ENSCLAG00000003497	DDX42	99	71.489	Chinchilla_lanigera
ENSKMAG00000009914	ddx42	99	68.377	ENSCSAG00000003914	DDX42	99	66.287	Chlorocebus_sabaeus
ENSKMAG00000009914	ddx42	66	83.929	ENSCHOG00000006241	DDX42	61	85.321	Choloepus_hoffmanni
ENSKMAG00000009914	ddx42	99	72.461	ENSCPBG00000026682	DDX42	82	79.949	Chrysemys_picta_bellii
ENSKMAG00000009914	ddx42	50	65.342	ENSCING00000001837	-	97	65.044	Ciona_intestinalis
ENSKMAG00000009914	ddx42	99	71.970	ENSCANG00000034663	DDX42	94	79.730	Colobus_angolensis_palliatus
ENSKMAG00000009914	ddx42	99	72.140	ENSCGRG00001009775	Ddx42	99	70.544	Cricetulus_griseus_chok1gshd
ENSKMAG00000009914	ddx42	99	72.140	ENSCGRG00000011718	Ddx42	99	70.544	Cricetulus_griseus_crigri
ENSKMAG00000009914	ddx42	100	85.714	ENSCSEG00000021574	ddx42	100	84.716	Cynoglossus_semilaevis
ENSKMAG00000009914	ddx42	100	88.280	ENSCVAG00000011404	ddx42	100	88.280	Cyprinodon_variegatus
ENSKMAG00000009914	ddx42	100	77.553	ENSDARG00000037928	ddx42	100	76.915	Danio_rerio
ENSKMAG00000009914	ddx42	99	69.214	ENSDNOG00000007961	DDX42	99	67.725	Dasypus_novemcinctus
ENSKMAG00000009914	ddx42	99	65.854	ENSDORG00000004199	Ddx42	99	62.813	Dipodomys_ordii
ENSKMAG00000009914	ddx42	68	61.513	FBgn0036104	CG6418	84	57.721	Drosophila_melanogaster
ENSKMAG00000009914	ddx42	85	72.506	ENSEBUG00000001155	ddx42	93	71.867	Eptatretus_burgeri
ENSKMAG00000009914	ddx42	100	72.440	ENSEASG00005013089	DDX42	94	79.940	Equus_asinus_asinus
ENSKMAG00000009914	ddx42	99	71.670	ENSECAG00000022684	DDX42	99	67.619	Equus_caballus
ENSKMAG00000009914	ddx42	62	86.486	ENSEEUG00000009144	DDX42	73	91.176	Erinaceus_europaeus
ENSKMAG00000009914	ddx42	100	81.018	ENSELUG00000020593	ddx42	100	78.981	Esox_lucius
ENSKMAG00000009914	ddx42	99	71.186	ENSFCAG00000003499	DDX42	83	79.315	Felis_catus
ENSKMAG00000009914	ddx42	92	75.383	ENSFALG00000004675	DDX42	72	76.492	Ficedula_albicollis
ENSKMAG00000009914	ddx42	99	71.924	ENSFDAG00000020516	DDX42	99	69.615	Fukomys_damarensis
ENSKMAG00000009914	ddx42	100	89.047	ENSFHEG00000023290	ddx42	100	89.047	Fundulus_heteroclitus
ENSKMAG00000009914	ddx42	78	83.239	ENSGMOG00000004595	ddx42	79	83.099	Gadus_morhua
ENSKMAG00000009914	ddx42	99	70.262	ENSGALG00000000581	DDX42	83	78.961	Gallus_gallus
ENSKMAG00000009914	ddx42	95	89.376	ENSGAFG00000011846	ddx42	96	89.396	Gambusia_affinis
ENSKMAG00000009914	ddx42	100	80.849	ENSGACG00000009782	ddx42	100	80.565	Gasterosteus_aculeatus
ENSKMAG00000009914	ddx42	99	71.862	ENSGAGG00000024411	DDX42	99	65.768	Gopherus_agassizii
ENSKMAG00000009914	ddx42	99	71.895	ENSGGOG00000006779	DDX42	91	79.940	Gorilla_gorilla
ENSKMAG00000009914	ddx42	91	90.986	ENSHBUG00000008705	ddx42	100	88.865	Haplochromis_burtoni
ENSKMAG00000009914	ddx42	99	69.223	ENSHGLG00000010024	DDX42	99	66.702	Heterocephalus_glaber_female
ENSKMAG00000009914	ddx42	90	56.005	ENSHGLG00100007138	-	84	57.458	Heterocephalus_glaber_male
ENSKMAG00000009914	ddx42	99	71.882	ENSHGLG00100004479	-	99	66.597	Heterocephalus_glaber_male
ENSKMAG00000009914	ddx42	100	77.193	ENSHCOG00000003357	ddx42	100	78.970	Hippocampus_comes
ENSKMAG00000009914	ddx42	100	77.297	ENSIPUG00000013327	ddx42	100	75.530	Ictalurus_punctatus
ENSKMAG00000009914	ddx42	99	72.505	ENSSTOG00000008922	DDX42	99	70.882	Ictidomys_tridecemlineatus
ENSKMAG00000009914	ddx42	99	72.553	ENSJJAG00000011727	Ddx42	99	70.539	Jaculus_jaculus
ENSKMAG00000009914	ddx42	100	80.254	ENSLBEG00000004687	ddx42	100	81.062	Labrus_bergylta
ENSKMAG00000009914	ddx42	99	72.366	ENSLACG00000013476	DDX42	97	72.835	Latimeria_chalumnae
ENSKMAG00000009914	ddx42	100	79.266	ENSLOCG00000011764	ddx42	100	77.622	Lepisosteus_oculatus
ENSKMAG00000009914	ddx42	99	72.737	ENSLAFG00000003249	DDX42	100	70.288	Loxodonta_africana
ENSKMAG00000009914	ddx42	99	71.970	ENSMFAG00000031356	DDX42	99	69.789	Macaca_fascicularis
ENSKMAG00000009914	ddx42	99	71.987	ENSMMUG00000016762	DDX42	90	79.638	Macaca_mulatta
ENSKMAG00000009914	ddx42	99	71.970	ENSMNEG00000038250	DDX42	99	69.789	Macaca_nemestrina
ENSKMAG00000009914	ddx42	99	71.263	ENSMLEG00000043080	DDX42	99	69.127	Mandrillus_leucophaeus
ENSKMAG00000009914	ddx42	91	90.723	ENSMAMG00000021888	ddx42	98	87.003	Mastacembelus_armatus
ENSKMAG00000009914	ddx42	91	91.106	ENSMZEG00005023103	ddx42	100	88.974	Maylandia_zebra
ENSKMAG00000009914	ddx42	99	70.521	ENSMGAG00000001822	DDX42	99	64.008	Meleagris_gallopavo
ENSKMAG00000009914	ddx42	77	77.311	ENSMAUG00000020774	-	88	80.090	Mesocricetus_auratus
ENSKMAG00000009914	ddx42	99	71.911	ENSMICG00000009952	DDX42	99	69.905	Microcebus_murinus
ENSKMAG00000009914	ddx42	99	72.591	ENSMOCG00000015504	Ddx42	99	69.150	Microtus_ochrogaster
ENSKMAG00000009914	ddx42	92	85.252	ENSMMOG00000016963	ddx42	83	86.420	Mola_mola
ENSKMAG00000009914	ddx42	51	84.435	ENSMODG00000009917	-	98	85.075	Monodelphis_domestica
ENSKMAG00000009914	ddx42	100	88.403	ENSMALG00000007800	ddx42	100	86.418	Monopterus_albus
ENSKMAG00000009914	ddx42	99	72.553	MGP_CAROLIEiJ_G0017314	Ddx42	84	79.695	Mus_caroli
ENSKMAG00000009914	ddx42	99	71.852	ENSMUSG00000020705	Ddx42	90	75.981	Mus_musculus
ENSKMAG00000009914	ddx42	77	84.101	MGP_PahariEiJ_G0018444	-	95	85.821	Mus_pahari
ENSKMAG00000009914	ddx42	99	72.447	MGP_SPRETEiJ_G0018158	Ddx42	90	78.788	Mus_spretus
ENSKMAG00000009914	ddx42	99	71.563	ENSMPUG00000014921	DDX42	99	70.179	Mustela_putorius_furo
ENSKMAG00000009914	ddx42	99	70.877	ENSMLUG00000011645	DDX42	82	78.934	Myotis_lucifugus
ENSKMAG00000009914	ddx42	99	72.311	ENSNGAG00000021897	Ddx42	99	69.780	Nannospalax_galili
ENSKMAG00000009914	ddx42	100	82.541	ENSNBRG00000004466	ddx42	100	87.309	Neolamprologus_brichardi
ENSKMAG00000009914	ddx42	99	72.046	ENSNLEG00000004248	DDX42	93	79.638	Nomascus_leucogenys
ENSKMAG00000009914	ddx42	77	70.798	ENSMEUG00000013227	-	71	69.779	Notamacropus_eugenii
ENSKMAG00000009914	ddx42	99	71.987	ENSOPRG00000014960	DDX42	100	70.390	Ochotona_princeps
ENSKMAG00000009914	ddx42	99	68.995	ENSODEG00000007810	DDX42	99	67.471	Octodon_degus
ENSKMAG00000009914	ddx42	91	90.625	ENSONIG00000000734	ddx42	100	88.755	Oreochromis_niloticus
ENSKMAG00000009914	ddx42	60	84.078	ENSOANG00000000265	DDX42	100	83.148	Ornithorhynchus_anatinus
ENSKMAG00000009914	ddx42	96	73.884	ENSOCUG00000004304	DDX42	77	79.061	Oryctolagus_cuniculus
ENSKMAG00000009914	ddx42	100	87.842	ENSORLG00000002395	ddx42	98	87.104	Oryzias_latipes
ENSKMAG00000009914	ddx42	100	87.185	ENSORLG00020011621	ddx42	100	87.227	Oryzias_latipes_hni
ENSKMAG00000009914	ddx42	100	87.076	ENSORLG00015004487	ddx42	100	87.118	Oryzias_latipes_hsok
ENSKMAG00000009914	ddx42	100	88.280	ENSOMEG00000020093	ddx42	100	86.667	Oryzias_melastigma
ENSKMAG00000009914	ddx42	99	71.639	ENSOGAG00000006872	DDX42	99	70.094	Otolemur_garnettii
ENSKMAG00000009914	ddx42	99	70.424	ENSOARG00000013540	DDX42	100	67.505	Ovis_aries
ENSKMAG00000009914	ddx42	99	71.895	ENSPPAG00000007496	DDX42	91	79.787	Pan_paniscus
ENSKMAG00000009914	ddx42	99	71.186	ENSPPRG00000002740	DDX42	83	79.315	Panthera_pardus
ENSKMAG00000009914	ddx42	99	71.398	ENSPTIG00000009932	DDX42	99	69.853	Panthera_tigris_altaica
ENSKMAG00000009914	ddx42	99	71.895	ENSPTRG00000009523	DDX42	91	79.787	Pan_troglodytes
ENSKMAG00000009914	ddx42	99	72.076	ENSPANG00000020990	DDX42	99	69.895	Papio_anubis
ENSKMAG00000009914	ddx42	100	77.923	ENSPKIG00000002901	ddx42	100	76.344	Paramormyrops_kingsleyae
ENSKMAG00000009914	ddx42	85	79.798	ENSPSIG00000010289	DDX42	95	79.040	Pelodiscus_sinensis
ENSKMAG00000009914	ddx42	100	79.217	ENSPMGG00000009323	ddx42	100	80.022	Periophthalmus_magnuspinnatus
ENSKMAG00000009914	ddx42	99	72.199	ENSPEMG00000006755	Ddx42	99	71.109	Peromyscus_maniculatus_bairdii
ENSKMAG00000009914	ddx42	85	71.301	ENSPMAG00000005580	ddx42	99	71.948	Petromyzon_marinus
ENSKMAG00000009914	ddx42	99	71.784	ENSPCIG00000009093	DDX42	99	69.168	Phascolarctos_cinereus
ENSKMAG00000009914	ddx42	100	87.407	ENSPFOG00000014104	ddx42	100	87.513	Poecilia_formosa
ENSKMAG00000009914	ddx42	100	87.193	ENSPLAG00000010522	ddx42	100	87.300	Poecilia_latipinna
ENSKMAG00000009914	ddx42	100	86.772	ENSPMEG00000010744	ddx42	100	86.243	Poecilia_mexicana
ENSKMAG00000009914	ddx42	100	85.519	ENSPREG00000009926	ddx42	100	84.575	Poecilia_reticulata
ENSKMAG00000009914	ddx42	99	69.135	ENSPPYG00000008531	DDX42	83	77.030	Pongo_abelii
ENSKMAG00000009914	ddx42	92	66.896	ENSPCAG00000002474	DDX42	100	62.854	Procavia_capensis
ENSKMAG00000009914	ddx42	99	61.855	ENSPCOG00000001559	DDX42	92	72.154	Propithecus_coquereli
ENSKMAG00000009914	ddx42	99	69.198	ENSPVAG00000000160	DDX42	79	79.893	Pteropus_vampyrus
ENSKMAG00000009914	ddx42	76	89.130	ENSPNYG00000013954	ddx42	97	86.176	Pundamilia_nyererei
ENSKMAG00000009914	ddx42	97	75.670	ENSPNAG00000017352	ddx42	100	77.964	Pygocentrus_nattereri
ENSKMAG00000009914	ddx42	99	72.476	ENSRNOG00000009474	Ddx42	99	70.117	Rattus_norvegicus
ENSKMAG00000009914	ddx42	99	71.970	ENSRBIG00000004781	DDX42	94	79.730	Rhinopithecus_bieti
ENSKMAG00000009914	ddx42	99	71.970	ENSRROG00000029794	DDX42	99	69.789	Rhinopithecus_roxellana
ENSKMAG00000009914	ddx42	99	72.660	ENSSBOG00000029624	DDX42	91	79.758	Saimiri_boliviensis_boliviensis
ENSKMAG00000009914	ddx42	99	72.088	ENSSHAG00000012896	-	100	69.199	Sarcophilus_harrisii
ENSKMAG00000009914	ddx42	71	49.408	ENSSHAG00000007919	-	84	51.910	Sarcophilus_harrisii
ENSKMAG00000009914	ddx42	89	82.260	ENSSFOG00015014064	ddx42	82	86.180	Scleropages_formosus
ENSKMAG00000009914	ddx42	100	86.117	ENSSMAG00000009077	ddx42	100	86.483	Scophthalmus_maximus
ENSKMAG00000009914	ddx42	100	90.502	ENSSDUG00000022221	ddx42	100	87.744	Seriola_dumerili
ENSKMAG00000009914	ddx42	100	88.293	ENSSLDG00000018483	ddx42	100	85.870	Seriola_lalandi_dorsalis
ENSKMAG00000009914	ddx42	99	71.081	ENSSARG00000009847	DDX42	83	78.173	Sorex_araneus
ENSKMAG00000009914	ddx42	99	73.024	ENSSPUG00000018806	DDX42	99	71.550	Sphenodon_punctatus
ENSKMAG00000009914	ddx42	100	89.485	ENSSPAG00000013055	ddx42	100	90.361	Stegastes_partitus
ENSKMAG00000009914	ddx42	85	70.869	ENSSSCG00000017289	DDX42	97	65.586	Sus_scrofa
ENSKMAG00000009914	ddx42	99	71.852	ENSTGUG00000001931	DDX42	99	69.758	Taeniopygia_guttata
ENSKMAG00000009914	ddx42	100	84.048	ENSTRUG00000010711	ddx42	99	91.236	Takifugu_rubripes
ENSKMAG00000009914	ddx42	83	77.004	ENSTBEG00000010159	DDX42	91	84.906	Tupaia_belangeri
ENSKMAG00000009914	ddx42	100	71.983	ENSTTRG00000006962	DDX42	83	79.468	Tursiops_truncatus
ENSKMAG00000009914	ddx42	99	72.046	ENSUAMG00000007321	DDX42	100	70.053	Ursus_americanus
ENSKMAG00000009914	ddx42	99	71.596	ENSUMAG00000017438	DDX42	100	69.926	Ursus_maritimus
ENSKMAG00000009914	ddx42	91	76.800	ENSVPAG00000009633	DDX42	77	74.497	Vicugna_pacos
ENSKMAG00000009914	ddx42	99	72.093	ENSVVUG00000006095	DDX42	99	69.534	Vulpes_vulpes
ENSKMAG00000009914	ddx42	100	71.160	ENSXETG00000003245	ddx42	100	69.885	Xenopus_tropicalis
ENSKMAG00000009914	ddx42	85	90.674	ENSXCOG00000017560	ddx42	97	89.896	Xiphophorus_couchianus
ENSKMAG00000009914	ddx42	100	90.999	ENSXMAG00000008138	ddx42	100	90.340	Xiphophorus_maculatus