EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000009944 (Gene tree)
Gene ID: 108248748
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: RAD54 like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 58820 bases
Position: chrLWHD01000372.1:53955-112774
Accession: 108248748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000013311	ResIII	PF04851.15	2.9e-06	1	1
ENSKMAP00000013276	ResIII	PF04851.15	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000013514	-	2094	-	ENSKMAP00000013311	697 (aa)	-	-
ENSKMAT00000013479	-	2688	XM_017437722	ENSKMAP00000013276	739 (aa)	XP_017293211	UPI0007F89E66

Gene Model

Click here to download ENSKMAG00000009944's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000009944's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000009944	rad54l	90	41.018	ENSKMAG00000004744	rad54b	75	44.257

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000009944	rad54l	99	78.495	ENSG00000085999	RAD54L	100	84.000	Homo_sapiens
ENSKMAG00000009944	rad54l	99	86.450	ENSAPOG00000011643	rad54l	99	86.450	Acanthochromis_polyacanthus
ENSKMAG00000009944	rad54l	99	78.331	ENSAMEG00000013902	RAD54L	99	78.331	Ailuropoda_melanoleuca
ENSKMAG00000009944	rad54l	99	86.198	ENSACIG00000001939	rad54l	99	86.198	Amphilophus_citrinellus
ENSKMAG00000009944	rad54l	99	89.851	ENSAOCG00000017576	rad54l	100	89.851	Amphiprion_ocellaris
ENSKMAG00000009944	rad54l	96	89.873	ENSAPEG00000020658	rad54l	98	89.873	Amphiprion_percula
ENSKMAG00000009944	rad54l	95	90.171	ENSATEG00000006767	rad54l	100	90.171	Anabas_testudineus
ENSKMAG00000009944	rad54l	94	83.022	ENSAPLG00000006389	RAD54L	99	83.022	Anas_platyrhynchos
ENSKMAG00000009944	rad54l	99	80.645	ENSACAG00000002312	RAD54L	99	80.645	Anolis_carolinensis
ENSKMAG00000009944	rad54l	99	78.360	ENSANAG00000035439	RAD54L	99	78.360	Aotus_nancymaae
ENSKMAG00000009944	rad54l	100	86.351	ENSACLG00000018711	rad54l	100	86.351	Astatotilapia_calliptera
ENSKMAG00000009944	rad54l	100	85.310	ENSAMXG00000012777	rad54l	100	85.310	Astyanax_mexicanus
ENSKMAG00000009944	rad54l	99	77.852	ENSBTAG00000019901	RAD54L	99	77.852	Bos_taurus
ENSKMAG00000009944	rad54l	91	59.706	WBGene00004298	rad-54	83	59.706	Caenorhabditis_elegans
ENSKMAG00000009944	rad54l	97	79.306	ENSCJAG00000021080	RAD54L	91	79.306	Callithrix_jacchus
ENSKMAG00000009944	rad54l	99	78.495	ENSCAFG00000004272	RAD54L	99	78.495	Canis_familiaris
ENSKMAG00000009944	rad54l	99	78.466	ENSCAFG00020015066	RAD54L	99	78.466	Canis_lupus_dingo
ENSKMAG00000009944	rad54l	99	77.823	ENSCHIG00000020118	RAD54L	99	77.823	Capra_hircus
ENSKMAG00000009944	rad54l	99	78.389	ENSTSYG00000002032	RAD54L	99	78.389	Carlito_syrichta
ENSKMAG00000009944	rad54l	99	78.763	ENSCPOG00000006768	RAD54L	99	78.763	Cavia_porcellus
ENSKMAG00000009944	rad54l	99	78.629	ENSCCAG00000025783	RAD54L	99	78.629	Cebus_capucinus
ENSKMAG00000009944	rad54l	99	78.495	ENSCATG00000030589	RAD54L	99	78.495	Cercocebus_atys
ENSKMAG00000009944	rad54l	99	78.898	ENSCLAG00000004645	RAD54L	99	78.898	Chinchilla_lanigera
ENSKMAG00000009944	rad54l	99	78.495	ENSCSAG00000001229	RAD54L	99	78.495	Chlorocebus_sabaeus
ENSKMAG00000009944	rad54l	99	80.619	ENSCPBG00000005675	RAD54L	99	80.619	Chrysemys_picta_bellii
ENSKMAG00000009944	rad54l	100	62.208	ENSCING00000024456	-	100	62.078	Ciona_intestinalis
ENSKMAG00000009944	rad54l	100	63.089	ENSCSAVG00000010859	-	100	63.007	Ciona_savignyi
ENSKMAG00000009944	rad54l	99	78.495	ENSCANG00000034891	RAD54L	99	78.495	Colobus_angolensis_palliatus
ENSKMAG00000009944	rad54l	99	77.868	ENSCGRG00001014807	Rad54l	99	77.868	Cricetulus_griseus_chok1gshd
ENSKMAG00000009944	rad54l	99	77.868	ENSCGRG00000016038	Rad54l	99	77.868	Cricetulus_griseus_crigri
ENSKMAG00000009944	rad54l	99	85.040	ENSCSEG00000001983	rad54l	99	85.040	Cynoglossus_semilaevis
ENSKMAG00000009944	rad54l	87	88.845	ENSCVAG00000019561	rad54l	100	88.845	Cyprinodon_variegatus
ENSKMAG00000009944	rad54l	100	83.897	ENSDARG00000018623	rad54l	100	83.897	Danio_rerio
ENSKMAG00000009944	rad54l	99	77.480	ENSDNOG00000003395	RAD54L	99	77.480	Dasypus_novemcinctus
ENSKMAG00000009944	rad54l	99	71.448	ENSDORG00000002632	Rad54l	99	71.580	Dipodomys_ordii
ENSKMAG00000009944	rad54l	99	54.873	FBgn0002989	okr	95	54.873	Drosophila_melanogaster
ENSKMAG00000009944	rad54l	77	76.201	ENSETEG00000000550	RAD54L	77	76.201	Echinops_telfairi
ENSKMAG00000009944	rad54l	99	77.658	ENSEASG00005004511	RAD54L	96	80.804	Equus_asinus_asinus
ENSKMAG00000009944	rad54l	99	78.091	ENSECAG00000008760	RAD54L	99	78.091	Equus_caballus
ENSKMAG00000009944	rad54l	99	76.408	ENSEEUG00000008113	RAD54L	99	76.408	Erinaceus_europaeus
ENSKMAG00000009944	rad54l	100	86.345	ENSELUG00000002295	rad54l	100	86.345	Esox_lucius
ENSKMAG00000009944	rad54l	99	77.957	ENSFCAG00000003444	RAD54L	99	77.957	Felis_catus
ENSKMAG00000009944	rad54l	99	79.273	ENSFALG00000009480	RAD54L	99	79.408	Ficedula_albicollis
ENSKMAG00000009944	rad54l	99	78.226	ENSFDAG00000007806	RAD54L	99	78.226	Fukomys_damarensis
ENSKMAG00000009944	rad54l	61	87.822	ENSFHEG00000009824	rad54l	83	82.573	Fundulus_heteroclitus
ENSKMAG00000009944	rad54l	99	83.875	ENSGMOG00000014568	rad54l	100	83.875	Gadus_morhua
ENSKMAG00000009944	rad54l	99	80.593	ENSGALG00000010356	RAD54L	92	80.593	Gallus_gallus
ENSKMAG00000009944	rad54l	91	86.330	ENSGAFG00000011110	rad54l	100	86.330	Gambusia_affinis
ENSKMAG00000009944	rad54l	100	87.989	ENSGACG00000003111	rad54l	98	87.989	Gasterosteus_aculeatus
ENSKMAG00000009944	rad54l	99	79.784	ENSGAGG00000014089	RAD54L	96	79.784	Gopherus_agassizii
ENSKMAG00000009944	rad54l	99	78.360	ENSGGOG00000010602	RAD54L	99	78.360	Gorilla_gorilla
ENSKMAG00000009944	rad54l	100	86.622	ENSHBUG00000007793	rad54l	100	86.622	Haplochromis_burtoni
ENSKMAG00000009944	rad54l	99	78.360	ENSHGLG00000000753	RAD54L	99	78.360	Heterocephalus_glaber_female
ENSKMAG00000009944	rad54l	99	78.226	ENSHGLG00100016987	RAD54L	99	78.226	Heterocephalus_glaber_male
ENSKMAG00000009944	rad54l	100	83.602	ENSIPUG00000015999	rad54l	100	86.370	Ictalurus_punctatus
ENSKMAG00000009944	rad54l	99	77.957	ENSSTOG00000029125	RAD54L	99	77.957	Ictidomys_tridecemlineatus
ENSKMAG00000009944	rad54l	99	65.545	ENSJJAG00000000235	-	99	65.410	Jaculus_jaculus
ENSKMAG00000009944	rad54l	99	87.924	ENSLBEG00000014617	rad54l	97	90.923	Labrus_bergylta
ENSKMAG00000009944	rad54l	99	84.865	ENSLOCG00000004144	rad54l	100	86.033	Lepisosteus_oculatus
ENSKMAG00000009944	rad54l	99	77.793	ENSLAFG00000007583	RAD54L	99	78.197	Loxodonta_africana
ENSKMAG00000009944	rad54l	99	78.629	ENSMFAG00000031241	RAD54L	99	78.629	Macaca_fascicularis
ENSKMAG00000009944	rad54l	99	78.629	ENSMMUG00000011568	RAD54L	99	78.629	Macaca_mulatta
ENSKMAG00000009944	rad54l	99	78.495	ENSMNEG00000038562	RAD54L	99	78.495	Macaca_nemestrina
ENSKMAG00000009944	rad54l	99	78.629	ENSMLEG00000038145	RAD54L	99	78.629	Mandrillus_leucophaeus
ENSKMAG00000009944	rad54l	99	86.856	ENSMAMG00000022180	rad54l	99	89.217	Mastacembelus_armatus
ENSKMAG00000009944	rad54l	100	86.216	ENSMZEG00005018081	rad54l	100	86.216	Maylandia_zebra
ENSKMAG00000009944	rad54l	99	80.432	ENSMGAG00000010634	RAD54L	99	80.432	Meleagris_gallopavo
ENSKMAG00000009944	rad54l	99	78.273	ENSMAUG00000020076	Rad54l	99	78.273	Mesocricetus_auratus
ENSKMAG00000009944	rad54l	99	78.360	ENSMICG00000003266	RAD54L	99	78.360	Microcebus_murinus
ENSKMAG00000009944	rad54l	99	78.543	ENSMOCG00000001778	Rad54l	99	78.543	Microtus_ochrogaster
ENSKMAG00000009944	rad54l	99	85.040	ENSMALG00000021148	rad54l	99	85.040	Monopterus_albus
ENSKMAG00000009944	rad54l	99	74.507	MGP_CAROLIEiJ_G0026325	Rad54l	99	74.507	Mus_caroli
ENSKMAG00000009944	rad54l	99	77.823	ENSMUSG00000028702	Rad54l	99	77.823	Mus_musculus
ENSKMAG00000009944	rad54l	99	78.062	MGP_PahariEiJ_G0028657	Rad54l	99	78.062	Mus_pahari
ENSKMAG00000009944	rad54l	99	77.957	MGP_SPRETEiJ_G0027297	Rad54l	99	77.957	Mus_spretus
ENSKMAG00000009944	rad54l	99	78.150	ENSMPUG00000012883	RAD54L	99	78.150	Mustela_putorius_furo
ENSKMAG00000009944	rad54l	99	78.600	ENSMLUG00000003763	RAD54L	99	78.600	Myotis_lucifugus
ENSKMAG00000009944	rad54l	99	78.091	ENSNGAG00000024213	Rad54l	99	78.091	Nannospalax_galili
ENSKMAG00000009944	rad54l	99	78.226	ENSNLEG00000016548	RAD54L	99	78.226	Nomascus_leucogenys
ENSKMAG00000009944	rad54l	91	79.080	ENSMEUG00000006793	RAD54L	100	79.080	Notamacropus_eugenii
ENSKMAG00000009944	rad54l	90	82.230	ENSOPRG00000016016	RAD54L	90	82.230	Ochotona_princeps
ENSKMAG00000009944	rad54l	99	78.898	ENSODEG00000008519	RAD54L	99	78.898	Octodon_degus
ENSKMAG00000009944	rad54l	100	86.486	ENSONIG00000007659	rad54l	100	86.486	Oreochromis_niloticus
ENSKMAG00000009944	rad54l	99	78.820	ENSOCUG00000005229	RAD54L	99	78.820	Oryctolagus_cuniculus
ENSKMAG00000009944	rad54l	99	84.511	ENSORLG00000002958	rad54l	99	84.783	Oryzias_latipes
ENSKMAG00000009944	rad54l	99	84.918	ENSORLG00020006554	rad54l	99	87.888	Oryzias_latipes_hni
ENSKMAG00000009944	rad54l	99	85.054	ENSORLG00015002907	rad54l	99	85.054	Oryzias_latipes_hsok
ENSKMAG00000009944	rad54l	99	85.190	ENSOMEG00000007770	rad54l	99	85.190	Oryzias_melastigma
ENSKMAG00000009944	rad54l	99	77.882	ENSOARG00000002264	RAD54L	99	77.882	Ovis_aries
ENSKMAG00000009944	rad54l	99	78.360	ENSPPAG00000031222	RAD54L	99	78.360	Pan_paniscus
ENSKMAG00000009944	rad54l	99	77.957	ENSPPRG00000010317	RAD54L	99	77.957	Panthera_pardus
ENSKMAG00000009944	rad54l	99	77.957	ENSPTIG00000012200	RAD54L	99	77.957	Panthera_tigris_altaica
ENSKMAG00000009944	rad54l	99	78.360	ENSPTRG00000000689	RAD54L	99	78.360	Pan_troglodytes
ENSKMAG00000009944	rad54l	99	78.629	ENSPANG00000016295	RAD54L	99	78.629	Papio_anubis
ENSKMAG00000009944	rad54l	100	78.273	ENSPKIG00000016172	rad54l	100	78.273	Paramormyrops_kingsleyae
ENSKMAG00000009944	rad54l	99	80.654	ENSPSIG00000003258	RAD54L	99	80.654	Pelodiscus_sinensis
ENSKMAG00000009944	rad54l	99	80.109	ENSPMGG00000016335	rad54l	99	79.675	Periophthalmus_magnuspinnatus
ENSKMAG00000009944	rad54l	99	78.138	ENSPEMG00000011422	Rad54l	99	78.138	Peromyscus_maniculatus_bairdii
ENSKMAG00000009944	rad54l	99	69.137	ENSPMAG00000007719	rad54l	99	69.137	Petromyzon_marinus
ENSKMAG00000009944	rad54l	100	79.301	ENSPCIG00000029032	RAD54L	100	79.301	Phascolarctos_cinereus
ENSKMAG00000009944	rad54l	86	88.208	ENSPFOG00000013732	rad54l	100	88.208	Poecilia_formosa
ENSKMAG00000009944	rad54l	82	86.039	ENSPLAG00000023416	rad54l	99	86.039	Poecilia_latipinna
ENSKMAG00000009944	rad54l	91	86.627	ENSPMEG00000008299	rad54l	100	86.627	Poecilia_mexicana
ENSKMAG00000009944	rad54l	100	85.656	ENSPREG00000019955	rad54l	100	85.656	Poecilia_reticulata
ENSKMAG00000009944	rad54l	99	68.276	ENSPPYG00000001398	RAD54L	99	68.276	Pongo_abelii
ENSKMAG00000009944	rad54l	79	82.353	ENSPCAG00000005323	RAD54L	79	82.353	Procavia_capensis
ENSKMAG00000009944	rad54l	99	78.091	ENSPCOG00000015423	RAD54L	99	78.091	Propithecus_coquereli
ENSKMAG00000009944	rad54l	99	82.195	ENSPNYG00000002942	rad54l	99	82.195	Pundamilia_nyererei
ENSKMAG00000009944	rad54l	100	85.020	ENSPNAG00000012483	rad54l	100	85.020	Pygocentrus_nattereri
ENSKMAG00000009944	rad54l	99	77.957	ENSRNOG00000013148	Rad54l	99	77.957	Rattus_norvegicus
ENSKMAG00000009944	rad54l	99	78.360	ENSRBIG00000043495	RAD54L	99	78.360	Rhinopithecus_bieti
ENSKMAG00000009944	rad54l	99	78.495	ENSRROG00000020844	RAD54L	99	78.495	Rhinopithecus_roxellana
ENSKMAG00000009944	rad54l	90	45.231	YGL163C	RAD54	75	48.266	Saccharomyces_cerevisiae
ENSKMAG00000009944	rad54l	99	78.763	ENSSBOG00000024672	RAD54L	99	78.763	Saimiri_boliviensis_boliviensis
ENSKMAG00000009944	rad54l	99	79.542	ENSSHAG00000000110	RAD54L	99	79.542	Sarcophilus_harrisii
ENSKMAG00000009944	rad54l	100	88.243	ENSSDUG00000019147	rad54l	100	88.243	Seriola_dumerili
ENSKMAG00000009944	rad54l	100	88.243	ENSSLDG00000012330	rad54l	100	88.243	Seriola_lalandi_dorsalis
ENSKMAG00000009944	rad54l	84	77.368	ENSSARG00000006689	RAD54L	100	77.368	Sorex_araneus
ENSKMAG00000009944	rad54l	99	88.227	ENSSPAG00000011016	rad54l	100	88.227	Stegastes_partitus
ENSKMAG00000009944	rad54l	99	78.091	ENSSSCG00000003905	RAD54L	99	78.091	Sus_scrofa
ENSKMAG00000009944	rad54l	99	79.139	ENSTGUG00000008233	RAD54L	99	79.139	Taeniopygia_guttata
ENSKMAG00000009944	rad54l	99	82.138	ENSTRUG00000008410	rad54l	100	81.461	Takifugu_rubripes
ENSKMAG00000009944	rad54l	99	80.217	ENSTNIG00000004716	rad54l	99	80.811	Tetraodon_nigroviridis
ENSKMAG00000009944	rad54l	99	73.253	ENSTTRG00000006315	RAD54L	99	73.253	Tursiops_truncatus
ENSKMAG00000009944	rad54l	99	78.349	ENSUAMG00000011824	RAD54L	99	78.349	Ursus_americanus
ENSKMAG00000009944	rad54l	99	77.267	ENSUMAG00000023603	RAD54L	99	77.267	Ursus_maritimus
ENSKMAG00000009944	rad54l	99	78.360	ENSVVUG00000007201	RAD54L	99	78.360	Vulpes_vulpes
ENSKMAG00000009944	rad54l	97	74.477	ENSXETG00000004369	rad54l	100	74.477	Xenopus_tropicalis
ENSKMAG00000009944	rad54l	55	83.538	ENSXCOG00000016028	rad54l	82	86.472	Xiphophorus_couchianus