EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000010082 (Gene tree)
Gene ID: 108239499
Gene Symbol: trnau1apb
Alias: secp43|trnau1ap|trnau1apl|trspap1|wu:fa56b07|wu:fc12c07|wu:fc69f09|zgc:113964|zgc:77884
Full Name: tRNA selenocysteine 1-associated protein 1-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 7312 bases
Position: chrLWHD01000065.1:2499966-2507277
Accession: 108239499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000013425	RRM_1	PF00076.22	1.4e-30	1	2
ENSKMAP00000013425	RRM_1	PF00076.22	1.4e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000013632	-	1255	XM_017422235	ENSKMAP00000013425	342 (aa)	XP_017277724	UPI0007F90A32

Gene Model

Click here to download ENSKMAG00000010082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000010082's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000010082	trnau1apb	63	31.609	ENSKMAG00000008202	tia1	78	31.609
ENSKMAG00000010082	trnau1apb	95	44.377	ENSKMAG00000001230	trnau1apa	70	52.294
ENSKMAG00000010082	trnau1apb	52	30.387	ENSKMAG00000011643	-	68	30.387

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000010082	trnau1apb	99	74.561	ENSAPOG00000010086	trnau1apb	72	83.645	Acanthochromis_polyacanthus
ENSKMAG00000010082	trnau1apb	99	80.645	ENSACIG00000001863	trnau1apb	69	90.541	Amphilophus_citrinellus
ENSKMAG00000010082	trnau1apb	99	87.755	ENSAOCG00000011891	trnau1apb	64	91.781	Amphiprion_ocellaris
ENSKMAG00000010082	trnau1apb	99	76.246	ENSAPEG00000008029	trnau1apb	65	91.781	Amphiprion_percula
ENSKMAG00000010082	trnau1apb	99	85.714	ENSATEG00000002196	trnau1apb	64	90.411	Anabas_testudineus
ENSKMAG00000010082	trnau1apb	99	80.290	ENSACLG00000003016	trnau1apb	68	90.991	Astatotilapia_calliptera
ENSKMAG00000010082	trnau1apb	99	62.757	ENSAMXG00000001805	trnau1apb	69	81.000	Astyanax_mexicanus
ENSKMAG00000010082	trnau1apb	99	81.105	ENSCSEG00000018215	trnau1apb	65	89.091	Cynoglossus_semilaevis
ENSKMAG00000010082	trnau1apb	95	82.979	ENSCVAG00000017866	trnau1apb	62	89.655	Cyprinodon_variegatus
ENSKMAG00000010082	trnau1apb	99	61.652	ENSDARG00000056475	trnau1apb	67	73.636	Danio_rerio
ENSKMAG00000010082	trnau1apb	99	60.058	ENSELUG00000016683	trnau1apb	66	74.091	Esox_lucius
ENSKMAG00000010082	trnau1apb	100	86.416	ENSFHEG00000001267	trnau1apb	63	91.818	Fundulus_heteroclitus
ENSKMAG00000010082	trnau1apb	99	68.258	ENSGMOG00000001160	trnau1apb	66	87.671	Gadus_morhua
ENSKMAG00000010082	trnau1apb	99	77.259	ENSGACG00000014944	trnau1apb	66	88.584	Gasterosteus_aculeatus
ENSKMAG00000010082	trnau1apb	100	86.337	ENSHBUG00000018944	trnau1apb	66	91.031	Haplochromis_burtoni
ENSKMAG00000010082	trnau1apb	67	80.870	ENSHCOG00000011350	trnau1apb	70	81.651	Hippocampus_comes
ENSKMAG00000010082	trnau1apb	99	60.234	ENSIPUG00000008843	tsp1l	68	75.909	Ictalurus_punctatus
ENSKMAG00000010082	trnau1apb	99	81.287	ENSLBEG00000020480	trnau1apb	66	89.041	Labrus_bergylta
ENSKMAG00000010082	trnau1apb	99	51.744	ENSLOCG00000013175	trnau1apb	66	64.423	Lepisosteus_oculatus
ENSKMAG00000010082	trnau1apb	99	84.795	ENSMAMG00000012192	trnau1apb	64	90.826	Mastacembelus_armatus
ENSKMAG00000010082	trnau1apb	100	86.337	ENSMZEG00005014852	trnau1apb	66	91.031	Maylandia_zebra
ENSKMAG00000010082	trnau1apb	96	73.699	ENSMMOG00000021521	trnau1apb	100	71.098	Mola_mola
ENSKMAG00000010082	trnau1apb	99	74.336	ENSMALG00000003772	trnau1apb	60	93.923	Monopterus_albus
ENSKMAG00000010082	trnau1apb	97	81.493	ENSNBRG00000000751	trnau1apb	69	90.991	Neolamprologus_brichardi
ENSKMAG00000010082	trnau1apb	99	76.331	ENSONIG00000016639	trnau1apb	73	90.741	Oreochromis_niloticus
ENSKMAG00000010082	trnau1apb	100	75.072	ENSORLG00000013265	trnau1apb	64	89.545	Oryzias_latipes
ENSKMAG00000010082	trnau1apb	100	83.140	ENSORLG00020004464	trnau1apb	100	78.488	Oryzias_latipes_hni
ENSKMAG00000010082	trnau1apb	100	83.140	ENSORLG00015021098	trnau1apb	100	78.488	Oryzias_latipes_hsok
ENSKMAG00000010082	trnau1apb	100	75.072	ENSOMEG00000016531	trnau1apb	64	88.636	Oryzias_melastigma
ENSKMAG00000010082	trnau1apb	53	78.571	ENSPKIG00000007995	trnau1apb	69	71.233	Paramormyrops_kingsleyae
ENSKMAG00000010082	trnau1apb	78	76.987	ENSPMGG00000018509	trnau1apb	94	77.778	Periophthalmus_magnuspinnatus
ENSKMAG00000010082	trnau1apb	100	87.283	ENSPFOG00000003938	trnau1apb	69	91.324	Poecilia_formosa
ENSKMAG00000010082	trnau1apb	100	87.283	ENSPLAG00000015480	trnau1apb	63	91.364	Poecilia_latipinna
ENSKMAG00000010082	trnau1apb	100	87.283	ENSPMEG00000012743	trnau1apb	63	91.364	Poecilia_mexicana
ENSKMAG00000010082	trnau1apb	100	85.260	ENSPREG00000015035	trnau1apb	63	90.000	Poecilia_reticulata
ENSKMAG00000010082	trnau1apb	99	77.971	ENSPNYG00000012127	trnau1apb	68	87.387	Pundamilia_nyererei
ENSKMAG00000010082	trnau1apb	99	63.557	ENSPNAG00000019138	trnau1apb	67	75.909	Pygocentrus_nattereri
ENSKMAG00000010082	trnau1apb	99	59.195	ENSSFOG00015014158	trnau1apb	67	73.009	Scleropages_formosus
ENSKMAG00000010082	trnau1apb	99	81.232	ENSSMAG00000001745	trnau1apb	66	89.954	Scophthalmus_maximus
ENSKMAG00000010082	trnau1apb	99	84.795	ENSSDUG00000011109	trnau1apb	64	90.868	Seriola_dumerili
ENSKMAG00000010082	trnau1apb	99	84.795	ENSSLDG00000012947	trnau1apb	64	90.868	Seriola_lalandi_dorsalis
ENSKMAG00000010082	trnau1apb	99	89.213	ENSSPAG00000006917	trnau1apb	71	92.694	Stegastes_partitus
ENSKMAG00000010082	trnau1apb	100	76.000	ENSTRUG00000008608	trnau1apb	69	82.353	Takifugu_rubripes
ENSKMAG00000010082	trnau1apb	94	76.923	ENSXCOG00000007974	trnau1apb	66	82.741	Xiphophorus_couchianus
ENSKMAG00000010082	trnau1apb	100	86.994	ENSXMAG00000029918	trnau1apb	63	91.818	Xiphophorus_maculatus