EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000010402 (Gene tree)
Gene ID: 108236669
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 5680 bases
Position: chrLWHD01000041.1:2486447-2492126
Accession: 108236669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000013865	Gar1	PF04410.14	6.1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000014073	-	4238	XM_017417498	ENSKMAP00000013865	211 (aa)	XP_017272987	UPI0007F8E8EB

Gene Model

Click here to download ENSKMAG00000010402's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000010402's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000010402	gar1	51	91.589	ENSG00000109534	GAR1	51	89.189	Homo_sapiens
ENSKMAG00000010402	gar1	51	96.296	ENSAPOG00000019754	gar1	52	95.495	Acanthochromis_polyacanthus
ENSKMAG00000010402	gar1	51	91.589	ENSAMEG00000004605	GAR1	54	89.189	Ailuropoda_melanoleuca
ENSKMAG00000010402	gar1	51	96.296	ENSAOCG00000020947	gar1	52	95.495	Amphiprion_ocellaris
ENSKMAG00000010402	gar1	51	96.296	ENSAPEG00000001676	gar1	52	95.495	Amphiprion_percula
ENSKMAG00000010402	gar1	51	95.370	ENSATEG00000003733	gar1	52	94.595	Anabas_testudineus
ENSKMAG00000010402	gar1	50	88.679	ENSAPLG00000010926	GAR1	62	85.714	Anas_platyrhynchos
ENSKMAG00000010402	gar1	67	80.142	ENSACAG00000010031	GAR1	53	86.607	Anolis_carolinensis
ENSKMAG00000010402	gar1	51	91.589	ENSANAG00000021608	GAR1	51	89.189	Aotus_nancymaae
ENSKMAG00000010402	gar1	52	97.273	ENSACLG00000010029	gar1	50	96.396	Astatotilapia_calliptera
ENSKMAG00000010402	gar1	67	83.099	ENSBTAG00000000748	GAR1	64	83.212	Bos_taurus
ENSKMAG00000010402	gar1	51	91.589	ENSCJAG00000004041	GAR1	51	89.189	Callithrix_jacchus
ENSKMAG00000010402	gar1	51	91.589	ENSCHIG00000016026	-	53	89.189	Capra_hircus
ENSKMAG00000010402	gar1	59	69.355	ENSCHIG00000011049	-	56	76.577	Capra_hircus
ENSKMAG00000010402	gar1	51	83.178	ENSTSYG00000026632	-	57	81.081	Carlito_syrichta
ENSKMAG00000010402	gar1	65	84.783	ENSTSYG00000013668	-	52	89.189	Carlito_syrichta
ENSKMAG00000010402	gar1	52	90.000	ENSCPOG00000004216	GAR1	51	89.189	Cavia_porcellus
ENSKMAG00000010402	gar1	51	91.589	ENSCCAG00000029372	GAR1	51	89.189	Cebus_capucinus
ENSKMAG00000010402	gar1	52	90.000	ENSCATG00000021854	GAR1	56	89.189	Cercocebus_atys
ENSKMAG00000010402	gar1	52	89.091	ENSCLAG00000005335	GAR1	69	94.545	Chinchilla_lanigera
ENSKMAG00000010402	gar1	51	89.720	ENSCSAG00000003922	GAR1	56	89.189	Chlorocebus_sabaeus
ENSKMAG00000010402	gar1	50	90.566	ENSCPBG00000004310	GAR1	56	88.288	Chrysemys_picta_bellii
ENSKMAG00000010402	gar1	52	89.091	ENSCANG00000039262	GAR1	51	88.288	Colobus_angolensis_palliatus
ENSKMAG00000010402	gar1	51	93.458	ENSCGRG00001003919	Gar1	50	90.991	Cricetulus_griseus_chok1gshd
ENSKMAG00000010402	gar1	51	94.444	ENSCSEG00000003525	gar1	50	93.694	Cynoglossus_semilaevis
ENSKMAG00000010402	gar1	51	95.370	ENSCVAG00000002103	gar1	53	94.595	Cyprinodon_variegatus
ENSKMAG00000010402	gar1	51	90.654	ENSDNOG00000037632	GAR1	56	88.288	Dasypus_novemcinctus
ENSKMAG00000010402	gar1	53	90.991	ENSDORG00000000482	Gar1	51	90.991	Dipodomys_ordii
ENSKMAG00000010402	gar1	69	84.828	ENSEASG00005004658	GAR1	51	90.991	Equus_asinus_asinus
ENSKMAG00000010402	gar1	69	84.138	ENSECAG00000013624	GAR1	56	90.090	Equus_caballus
ENSKMAG00000010402	gar1	50	56.604	ENSFCAG00000025841	-	52	58.182	Felis_catus
ENSKMAG00000010402	gar1	51	92.523	ENSFCAG00000040791	-	53	90.090	Felis_catus
ENSKMAG00000010402	gar1	50	91.509	ENSFALG00000006445	GAR1	51	88.393	Ficedula_albicollis
ENSKMAG00000010402	gar1	53	95.495	ENSFHEG00000008068	gar1	52	95.495	Fundulus_heteroclitus
ENSKMAG00000010402	gar1	51	92.593	ENSGMOG00000012419	gar1	73	74.699	Gadus_morhua
ENSKMAG00000010402	gar1	50	89.623	ENSGALG00000020164	GAR1	51	86.607	Gallus_gallus
ENSKMAG00000010402	gar1	51	92.523	ENSGGOG00000008681	GAR1	51	90.090	Gorilla_gorilla
ENSKMAG00000010402	gar1	77	91.358	ENSHBUG00000023860	gar1	82	91.358	Haplochromis_burtoni
ENSKMAG00000010402	gar1	51	93.458	ENSHGLG00000000493	GAR1	72	96.364	Heterocephalus_glaber_female
ENSKMAG00000010402	gar1	51	93.519	ENSHCOG00000008656	gar1	50	93.578	Hippocampus_comes
ENSKMAG00000010402	gar1	52	92.727	ENSIPUG00000003194	gar1	53	91.892	Ictalurus_punctatus
ENSKMAG00000010402	gar1	76	75.155	ENSSTOG00000005577	GAR1	71	94.545	Ictidomys_tridecemlineatus
ENSKMAG00000010402	gar1	51	90.654	ENSJJAG00000010063	Gar1	50	88.288	Jaculus_jaculus
ENSKMAG00000010402	gar1	57	82.645	ENSLACG00000003306	GAR1	67	83.036	Latimeria_chalumnae
ENSKMAG00000010402	gar1	51	78.704	ENSMFAG00000003572	-	54	76.577	Macaca_fascicularis
ENSKMAG00000010402	gar1	52	90.000	ENSMFAG00000024592	GAR1	51	89.189	Macaca_fascicularis
ENSKMAG00000010402	gar1	52	90.000	ENSMMUG00000021225	GAR1	51	89.189	Macaca_mulatta
ENSKMAG00000010402	gar1	52	90.000	ENSMNEG00000042594	GAR1	51	89.189	Macaca_nemestrina
ENSKMAG00000010402	gar1	52	90.000	ENSMLEG00000002496	GAR1	51	89.189	Mandrillus_leucophaeus
ENSKMAG00000010402	gar1	52	96.330	ENSMAMG00000017583	gar1	50	95.455	Mastacembelus_armatus
ENSKMAG00000010402	gar1	52	97.273	ENSMZEG00005001281	gar1	50	96.396	Maylandia_zebra
ENSKMAG00000010402	gar1	50	89.623	ENSMGAG00000011058	GAR1	50	86.607	Meleagris_gallopavo
ENSKMAG00000010402	gar1	51	93.458	ENSMAUG00000016788	Gar1	70	96.364	Mesocricetus_auratus
ENSKMAG00000010402	gar1	53	87.500	ENSMICG00000003326	GAR1	51	88.288	Microcebus_murinus
ENSKMAG00000010402	gar1	51	93.458	ENSMOCG00000001340	Gar1	70	96.364	Microtus_ochrogaster
ENSKMAG00000010402	gar1	51	95.327	ENSMMOG00000004156	gar1	54	93.694	Mola_mola
ENSKMAG00000010402	gar1	57	85.124	ENSMODG00000005897	GAR1	97	80.000	Monodelphis_domestica
ENSKMAG00000010402	gar1	51	95.327	ENSMALG00000009672	gar1	51	93.694	Monopterus_albus
ENSKMAG00000010402	gar1	51	92.523	MGP_CAROLIEiJ_G0025627	Gar1	70	96.364	Mus_caroli
ENSKMAG00000010402	gar1	52	90.909	ENSMUSG00000028010	Gar1	70	96.364	Mus_musculus
ENSKMAG00000010402	gar1	52	90.909	MGP_PahariEiJ_G0027076	Gar1	70	96.364	Mus_pahari
ENSKMAG00000010402	gar1	52	90.909	MGP_SPRETEiJ_G0026580	Gar1	70	96.364	Mus_spretus
ENSKMAG00000010402	gar1	51	92.523	ENSMPUG00000008615	GAR1	53	90.090	Mustela_putorius_furo
ENSKMAG00000010402	gar1	51	91.589	ENSMLUG00000003776	GAR1	50	89.189	Myotis_lucifugus
ENSKMAG00000010402	gar1	52	90.000	ENSNGAG00000008268	Gar1	71	94.545	Nannospalax_galili
ENSKMAG00000010402	gar1	52	90.000	ENSNLEG00000016578	GAR1	51	89.189	Nomascus_leucogenys
ENSKMAG00000010402	gar1	50	78.095	ENSNLEG00000034282	-	56	74.775	Nomascus_leucogenys
ENSKMAG00000010402	gar1	51	90.654	ENSODEG00000011083	GAR1	57	89.189	Octodon_degus
ENSKMAG00000010402	gar1	51	96.296	ENSONIG00000001085	gar1	50	95.495	Oreochromis_niloticus
ENSKMAG00000010402	gar1	51	91.589	ENSOCUG00000003901	GAR1	52	89.189	Oryctolagus_cuniculus
ENSKMAG00000010402	gar1	51	96.296	ENSORLG00000020583	gar1	50	95.495	Oryzias_latipes
ENSKMAG00000010402	gar1	51	96.296	ENSORLG00020008602	gar1	50	95.495	Oryzias_latipes_hni
ENSKMAG00000010402	gar1	51	96.296	ENSORLG00015017643	gar1	51	95.495	Oryzias_latipes_hsok
ENSKMAG00000010402	gar1	51	91.589	ENSOGAG00000004693	GAR1	52	89.189	Otolemur_garnettii
ENSKMAG00000010402	gar1	51	91.589	ENSOARG00000004910	GAR1	53	89.189	Ovis_aries
ENSKMAG00000010402	gar1	64	85.075	ENSPPAG00000014081	GAR1	56	89.189	Pan_paniscus
ENSKMAG00000010402	gar1	51	92.523	ENSPPRG00000023697	GAR1	53	90.090	Panthera_pardus
ENSKMAG00000010402	gar1	51	92.523	ENSPTIG00000021565	GAR1	53	90.090	Panthera_tigris_altaica
ENSKMAG00000010402	gar1	52	90.000	ENSPTRG00000016364	GAR1	56	89.189	Pan_troglodytes
ENSKMAG00000010402	gar1	52	90.000	ENSPANG00000000639	GAR1	51	89.189	Papio_anubis
ENSKMAG00000010402	gar1	75	80.380	ENSPSIG00000002970	GAR1	51	88.288	Pelodiscus_sinensis
ENSKMAG00000010402	gar1	51	93.458	ENSPEMG00000015838	Gar1	70	96.364	Peromyscus_maniculatus_bairdii
ENSKMAG00000010402	gar1	51	95.370	ENSPFOG00000024155	gar1	53	94.595	Poecilia_formosa
ENSKMAG00000010402	gar1	51	95.370	ENSPLAG00000015056	gar1	53	94.595	Poecilia_latipinna
ENSKMAG00000010402	gar1	51	96.296	ENSPMEG00000009320	gar1	53	95.495	Poecilia_mexicana
ENSKMAG00000010402	gar1	51	91.589	ENSPPYG00000014996	GAR1	51	89.189	Pongo_abelii
ENSKMAG00000010402	gar1	51	89.720	ENSPCOG00000027049	GAR1	57	89.189	Propithecus_coquereli
ENSKMAG00000010402	gar1	51	93.519	ENSRNOG00000061146	Gar1	65	90.991	Rattus_norvegicus
ENSKMAG00000010402	gar1	51	91.589	ENSRBIG00000019547	GAR1	56	89.189	Rhinopithecus_bieti
ENSKMAG00000010402	gar1	53	74.107	ENSRBIG00000042411	-	54	73.874	Rhinopithecus_bieti
ENSKMAG00000010402	gar1	53	74.107	ENSRROG00000044348	-	53	73.874	Rhinopithecus_roxellana
ENSKMAG00000010402	gar1	52	90.000	ENSRROG00000028454	GAR1	56	89.189	Rhinopithecus_roxellana
ENSKMAG00000010402	gar1	51	91.589	ENSSBOG00000024785	GAR1	51	89.189	Saimiri_boliviensis_boliviensis
ENSKMAG00000010402	gar1	51	94.444	ENSSMAG00000009976	gar1	51	93.694	Scophthalmus_maximus
ENSKMAG00000010402	gar1	51	95.370	ENSSLDG00000023264	gar1	52	94.595	Seriola_lalandi_dorsalis
ENSKMAG00000010402	gar1	61	83.721	ENSSPUG00000008707	GAR1	62	89.189	Sphenodon_punctatus
ENSKMAG00000010402	gar1	69	83.448	ENSSSCG00000009137	GAR1	55	89.189	Sus_scrofa
ENSKMAG00000010402	gar1	64	85.075	ENSTGUG00000004185	GAR1	67	91.919	Taeniopygia_guttata
ENSKMAG00000010402	gar1	51	94.444	ENSTRUG00000020580	gar1	53	93.694	Takifugu_rubripes
ENSKMAG00000010402	gar1	50	97.143	ENSTNIG00000013023	gar1	63	96.396	Tetraodon_nigroviridis
ENSKMAG00000010402	gar1	51	92.523	ENSUMAG00000000776	GAR1	54	90.090	Ursus_maritimus
ENSKMAG00000010402	gar1	71	82.667	ENSVVUG00000017612	GAR1	57	90.090	Vulpes_vulpes
ENSKMAG00000010402	gar1	50	88.679	ENSXETG00000024114	gar1	51	85.714	Xenopus_tropicalis