EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000010709 (Gene tree)
Gene ID: 108233791
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 6530 bases
Position: chrLWHD01000023.1:1627505-1634034
Accession: 108233791
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000014280	Nucleoplasmin	PF03066.15	1.7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000014491	-	2465	XM_017412476	ENSKMAP00000014280	291 (aa)	XP_017267965	UPI0007F8749E

Gene Model

Click here to download ENSKMAG00000010709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000010709's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000010709	npm1a	97	41.860	ENSKMAG00000008260	npm1b	98	42.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000010709	npm1a	100	72.333	ENSAPOG00000002813	npm1a	100	71.667	Acanthochromis_polyacanthus
ENSKMAG00000010709	npm1a	94	70.968	ENSACIG00000014201	npm1a	100	72.401	Amphilophus_citrinellus
ENSKMAG00000010709	npm1a	89	67.181	ENSAOCG00000004978	npm1a	100	65.251	Amphiprion_ocellaris
ENSKMAG00000010709	npm1a	100	72.241	ENSAPEG00000008594	npm1a	100	72.241	Amphiprion_percula
ENSKMAG00000010709	npm1a	99	71.336	ENSATEG00000008885	npm1a	99	71.987	Anabas_testudineus
ENSKMAG00000010709	npm1a	97	64.437	ENSACLG00000008376	npm1a	96	65.141	Astatotilapia_calliptera
ENSKMAG00000010709	npm1a	97	50.530	ENSAMXG00000010155	npm1a	98	53.472	Astyanax_mexicanus
ENSKMAG00000010709	npm1a	100	58.076	ENSCSEG00000011165	npm1a	100	59.107	Cynoglossus_semilaevis
ENSKMAG00000010709	npm1a	100	72.635	ENSCVAG00000008960	npm1a	100	70.946	Cyprinodon_variegatus
ENSKMAG00000010709	npm1a	97	63.958	ENSDARG00000014329	npm1a	94	72.078	Danio_rerio
ENSKMAG00000010709	npm1a	95	32.923	ENSEBUG00000012753	npm1a	77	36.688	Eptatretus_burgeri
ENSKMAG00000010709	npm1a	100	63.300	ENSELUG00000013705	npm1a	100	63.636	Esox_lucius
ENSKMAG00000010709	npm1a	100	74.000	ENSFHEG00000012496	npm1a	100	74.667	Fundulus_heteroclitus
ENSKMAG00000010709	npm1a	100	66.887	ENSGAFG00000013059	npm1a	100	69.205	Gambusia_affinis
ENSKMAG00000010709	npm1a	99	63.574	ENSGACG00000020319	npm1a	99	63.918	Gasterosteus_aculeatus
ENSKMAG00000010709	npm1a	99	64.669	ENSHBUG00000000776	npm1a	100	66.877	Haplochromis_burtoni
ENSKMAG00000010709	npm1a	100	57.860	ENSHCOG00000001059	npm1a	98	58.644	Hippocampus_comes
ENSKMAG00000010709	npm1a	98	57.525	ENSIPUG00000019452	npm1	99	57.912	Ictalurus_punctatus
ENSKMAG00000010709	npm1a	100	66.555	ENSLBEG00000008793	npm1a	99	67.119	Labrus_bergylta
ENSKMAG00000010709	npm1a	85	56.296	ENSLOCG00000009683	npm1a	100	56.667	Lepisosteus_oculatus
ENSKMAG00000010709	npm1a	100	74.832	ENSMAMG00000009344	npm1a	82	75.510	Mastacembelus_armatus
ENSKMAG00000010709	npm1a	99	67.089	ENSMZEG00005013717	npm1a	100	68.038	Maylandia_zebra
ENSKMAG00000010709	npm1a	95	70.968	ENSMMOG00000007980	npm1a	100	70.968	Mola_mola
ENSKMAG00000010709	npm1a	100	70.764	ENSMALG00000001146	npm1a	100	72.757	Monopterus_albus
ENSKMAG00000010709	npm1a	99	64.151	ENSNBRG00000013172	npm1a	100	65.723	Neolamprologus_brichardi
ENSKMAG00000010709	npm1a	99	64.570	ENSONIG00000001860	npm1a	99	67.881	Oreochromis_niloticus
ENSKMAG00000010709	npm1a	100	76.271	ENSORLG00000010179	npm1a	100	75.932	Oryzias_latipes
ENSKMAG00000010709	npm1a	100	74.490	ENSORLG00020020817	npm1a	100	74.150	Oryzias_latipes_hni
ENSKMAG00000010709	npm1a	100	75.932	ENSORLG00015003439	npm1a	100	75.593	Oryzias_latipes_hsok
ENSKMAG00000010709	npm1a	100	75.593	ENSOMEG00000007083	npm1a	100	75.932	Oryzias_melastigma
ENSKMAG00000010709	npm1a	100	52.632	ENSPKIG00000023943	npm1a	100	52.632	Paramormyrops_kingsleyae
ENSKMAG00000010709	npm1a	100	53.535	ENSPMGG00000011716	npm1a	99	53.559	Periophthalmus_magnuspinnatus
ENSKMAG00000010709	npm1a	100	69.231	ENSPFOG00000019173	npm1a	100	72.575	Poecilia_formosa
ENSKMAG00000010709	npm1a	100	69.463	ENSPLAG00000001093	npm1a	100	71.333	Poecilia_latipinna
ENSKMAG00000010709	npm1a	100	69.231	ENSPMEG00000012523	npm1a	100	72.575	Poecilia_mexicana
ENSKMAG00000010709	npm1a	100	72.425	ENSPREG00000001647	npm1a	100	72.757	Poecilia_reticulata
ENSKMAG00000010709	npm1a	99	65.385	ENSPNYG00000019321	npm1a	100	68.590	Pundamilia_nyererei
ENSKMAG00000010709	npm1a	97	58.844	ENSPNAG00000026891	npm1a	98	58.844	Pygocentrus_nattereri
ENSKMAG00000010709	npm1a	100	60.067	ENSSFOG00015007074	npm1a	100	60.403	Scleropages_formosus
ENSKMAG00000010709	npm1a	100	70.707	ENSSMAG00000019090	npm1a	100	71.044	Scophthalmus_maximus
ENSKMAG00000010709	npm1a	100	70.134	ENSSDUG00000015609	npm1a	100	73.154	Seriola_dumerili
ENSKMAG00000010709	npm1a	100	72.391	ENSSLDG00000017849	npm1a	100	73.064	Seriola_lalandi_dorsalis
ENSKMAG00000010709	npm1a	100	63.265	ENSSPAG00000021660	npm1a	100	60.269	Stegastes_partitus
ENSKMAG00000010709	npm1a	100	71.854	ENSTRUG00000024003	npm1a	100	72.517	Takifugu_rubripes
ENSKMAG00000010709	npm1a	100	71.088	ENSTNIG00000010773	npm1a	100	71.429	Tetraodon_nigroviridis
ENSKMAG00000010709	npm1a	99	65.636	ENSXCOG00000005958	npm1a	100	69.675	Xiphophorus_couchianus
ENSKMAG00000010709	npm1a	100	71.617	ENSXMAG00000000396	npm1a	100	71.947	Xiphophorus_maculatus