EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000010916 (Gene tree)
Gene ID: 108229570
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 9577 bases
Position: chrLWHD01000006.1:8413063-8422639
Accession: 108229570
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000014602	Suf	PF05843.14	3.2e-84	1	1
ENSKMAP00000014645	Suf	PF05843.14	1.2e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000014815	-	2868	XM_017405245	ENSKMAP00000014602	716 (aa)	XP_017260734	UPI0007F93421
ENSKMAT00000014858	-	1965	-	ENSKMAP00000014645	654 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000010916's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000010916's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000010916	cstf3	100	89.833	ENSG00000176102	CSTF3	100	89.833	Homo_sapiens
ENSKMAG00000010916	cstf3	100	96.369	ENSAPOG00000014054	cstf3	100	96.369	Acanthochromis_polyacanthus
ENSKMAG00000010916	cstf3	99	90.678	ENSAMEG00000007187	CSTF3	98	90.678	Ailuropoda_melanoleuca
ENSKMAG00000010916	cstf3	87	91.653	ENSACIG00000005539	cstf3	100	91.653	Amphilophus_citrinellus
ENSKMAG00000010916	cstf3	100	96.369	ENSAOCG00000010930	cstf3	100	96.369	Amphiprion_ocellaris
ENSKMAG00000010916	cstf3	100	96.369	ENSAPEG00000007903	cstf3	100	96.369	Amphiprion_percula
ENSKMAG00000010916	cstf3	100	96.369	ENSATEG00000000190	cstf3	100	96.369	Anabas_testudineus
ENSKMAG00000010916	cstf3	99	90.395	ENSAPLG00000007217	CSTF3	100	90.395	Anas_platyrhynchos
ENSKMAG00000010916	cstf3	100	90.390	ENSACAG00000002823	CSTF3	100	90.390	Anolis_carolinensis
ENSKMAG00000010916	cstf3	100	89.833	ENSANAG00000020699	CSTF3	100	90.240	Aotus_nancymaae
ENSKMAG00000010916	cstf3	98	96.444	ENSACLG00000007820	cstf3	100	95.670	Astatotilapia_calliptera
ENSKMAG00000010916	cstf3	100	90.808	ENSAMXG00000014198	cstf3	100	91.086	Astyanax_mexicanus
ENSKMAG00000010916	cstf3	100	89.833	ENSBTAG00000008617	CSTF3	100	90.504	Bos_taurus
ENSKMAG00000010916	cstf3	97	47.418	WBGene00006307	suf-1	99	47.418	Caenorhabditis_elegans
ENSKMAG00000010916	cstf3	100	89.833	ENSCJAG00000005533	CSTF3	100	90.240	Callithrix_jacchus
ENSKMAG00000010916	cstf3	99	90.350	ENSCAFG00000007264	CSTF3	99	90.350	Canis_familiaris
ENSKMAG00000010916	cstf3	99	90.819	ENSCAFG00020002715	CSTF3	98	90.819	Canis_lupus_dingo
ENSKMAG00000010916	cstf3	98	89.189	ENSCHIG00000016418	CSTF3	100	90.240	Capra_hircus
ENSKMAG00000010916	cstf3	99	90.819	ENSTSYG00000000451	CSTF3	99	96.214	Carlito_syrichta
ENSKMAG00000010916	cstf3	83	87.943	ENSCAPG00000010958	CSTF3	98	87.943	Cavia_aperea
ENSKMAG00000010916	cstf3	100	89.833	ENSCPOG00000005545	CSTF3	100	90.476	Cavia_porcellus
ENSKMAG00000010916	cstf3	100	89.833	ENSCCAG00000024790	CSTF3	96	96.214	Cebus_capucinus
ENSKMAG00000010916	cstf3	100	89.833	ENSCATG00000007080	CSTF3	100	90.240	Cercocebus_atys
ENSKMAG00000010916	cstf3	100	89.833	ENSCLAG00000016179	CSTF3	100	89.833	Chinchilla_lanigera
ENSKMAG00000010916	cstf3	78	96.992	ENSCHOG00000002497	CSTF3	79	96.992	Choloepus_hoffmanni
ENSKMAG00000010916	cstf3	100	89.833	ENSCPBG00000006753	CSTF3	100	89.833	Chrysemys_picta_bellii
ENSKMAG00000010916	cstf3	99	60.719	ENSCING00000006401	-	99	60.719	Ciona_intestinalis
ENSKMAG00000010916	cstf3	98	61.181	ENSCSAVG00000004851	-	100	61.181	Ciona_savignyi
ENSKMAG00000010916	cstf3	100	89.833	ENSCANG00000035468	CSTF3	100	90.240	Colobus_angolensis_palliatus
ENSKMAG00000010916	cstf3	99	90.678	ENSCGRG00001014773	Cstf3	99	90.678	Cricetulus_griseus_chok1gshd
ENSKMAG00000010916	cstf3	99	90.678	ENSCGRG00000004142	Cstf3	99	90.678	Cricetulus_griseus_crigri
ENSKMAG00000010916	cstf3	100	94.693	ENSCSEG00000014283	cstf3	100	94.693	Cynoglossus_semilaevis
ENSKMAG00000010916	cstf3	100	94.553	ENSCVAG00000019739	cstf3	100	94.553	Cyprinodon_variegatus
ENSKMAG00000010916	cstf3	100	93.445	ENSDARG00000018904	cstf3	100	93.445	Danio_rerio
ENSKMAG00000010916	cstf3	99	90.960	ENSDNOG00000007366	CSTF3	99	90.960	Dasypus_novemcinctus
ENSKMAG00000010916	cstf3	99	82.889	ENSDORG00000005898	Cstf3	99	82.889	Dipodomys_ordii
ENSKMAG00000010916	cstf3	99	56.027	FBgn0003559	su(f)	98	56.027	Drosophila_melanogaster
ENSKMAG00000010916	cstf3	89	85.047	ENSETEG00000017097	CSTF3	90	85.047	Echinops_telfairi
ENSKMAG00000010916	cstf3	87	73.595	ENSEBUG00000015459	cstf3	96	73.798	Eptatretus_burgeri
ENSKMAG00000010916	cstf3	99	89.407	ENSEASG00005019884	CSTF3	96	96.214	Equus_asinus_asinus
ENSKMAG00000010916	cstf3	99	89.407	ENSECAG00000023338	CSTF3	96	96.214	Equus_caballus
ENSKMAG00000010916	cstf3	100	84.819	ENSEEUG00000015167	CSTF3	100	84.819	Erinaceus_europaeus
ENSKMAG00000010916	cstf3	100	93.166	ENSELUG00000023393	cstf3	100	93.166	Esox_lucius
ENSKMAG00000010916	cstf3	99	90.210	ENSFCAG00000030711	CSTF3	99	90.210	Felis_catus
ENSKMAG00000010916	cstf3	92	92.157	ENSFALG00000010764	CSTF3	100	89.094	Ficedula_albicollis
ENSKMAG00000010916	cstf3	100	89.694	ENSFDAG00000012082	CSTF3	100	89.694	Fukomys_damarensis
ENSKMAG00000010916	cstf3	100	94.553	ENSFHEG00000020623	cstf3	100	94.553	Fundulus_heteroclitus
ENSKMAG00000010916	cstf3	100	92.618	ENSGMOG00000012275	cstf3	100	92.618	Gadus_morhua
ENSKMAG00000010916	cstf3	100	89.415	ENSGALG00000011685	CSTF3	100	89.415	Gallus_gallus
ENSKMAG00000010916	cstf3	100	94.972	ENSGAFG00000002181	cstf3	100	94.972	Gambusia_affinis
ENSKMAG00000010916	cstf3	100	95.251	ENSGACG00000015997	cstf3	100	95.251	Gasterosteus_aculeatus
ENSKMAG00000010916	cstf3	100	89.833	ENSGAGG00000006200	CSTF3	100	89.833	Gopherus_agassizii
ENSKMAG00000010916	cstf3	99	85.169	ENSGGOG00000026591	CSTF3	96	91.314	Gorilla_gorilla
ENSKMAG00000010916	cstf3	98	96.302	ENSHBUG00000016656	cstf3	100	95.531	Haplochromis_burtoni
ENSKMAG00000010916	cstf3	100	89.972	ENSHGLG00000017834	CSTF3	100	89.972	Heterocephalus_glaber_female
ENSKMAG00000010916	cstf3	100	89.972	ENSHGLG00100018042	CSTF3	100	89.972	Heterocephalus_glaber_male
ENSKMAG00000010916	cstf3	100	92.458	ENSHCOG00000015218	cstf3	100	92.458	Hippocampus_comes
ENSKMAG00000010916	cstf3	100	92.050	ENSIPUG00000013170	CSTF3	100	92.050	Ictalurus_punctatus
ENSKMAG00000010916	cstf3	100	89.833	ENSSTOG00000013306	CSTF3	100	89.833	Ictidomys_tridecemlineatus
ENSKMAG00000010916	cstf3	99	81.073	ENSJJAG00000018430	Cstf3	98	81.073	Jaculus_jaculus
ENSKMAG00000010916	cstf3	100	95.251	ENSLBEG00000002306	cstf3	100	95.251	Labrus_bergylta
ENSKMAG00000010916	cstf3	100	89.679	ENSLACG00000017296	CSTF3	100	89.679	Latimeria_chalumnae
ENSKMAG00000010916	cstf3	100	92.340	ENSLOCG00000004415	cstf3	100	92.340	Lepisosteus_oculatus
ENSKMAG00000010916	cstf3	99	90.490	ENSLAFG00000008712	CSTF3	99	90.490	Loxodonta_africana
ENSKMAG00000010916	cstf3	100	89.833	ENSMFAG00000029516	CSTF3	100	90.240	Macaca_fascicularis
ENSKMAG00000010916	cstf3	100	89.833	ENSMMUG00000002542	CSTF3	100	89.833	Macaca_mulatta
ENSKMAG00000010916	cstf3	100	89.833	ENSMNEG00000021807	CSTF3	100	90.240	Macaca_nemestrina
ENSKMAG00000010916	cstf3	100	89.833	ENSMLEG00000039594	CSTF3	97	93.987	Mandrillus_leucophaeus
ENSKMAG00000010916	cstf3	100	95.531	ENSMAMG00000020423	cstf3	100	95.531	Mastacembelus_armatus
ENSKMAG00000010916	cstf3	98	96.444	ENSMZEG00005012082	cstf3	100	95.670	Maylandia_zebra
ENSKMAG00000010916	cstf3	100	89.276	ENSMGAG00000001383	CSTF3	100	89.276	Meleagris_gallopavo
ENSKMAG00000010916	cstf3	99	90.070	ENSMAUG00000002487	Cstf3	99	90.070	Mesocricetus_auratus
ENSKMAG00000010916	cstf3	100	89.833	ENSMICG00000004784	CSTF3	100	90.240	Microcebus_murinus
ENSKMAG00000010916	cstf3	99	90.210	ENSMOCG00000017583	Cstf3	99	90.210	Microtus_ochrogaster
ENSKMAG00000010916	cstf3	99	95.621	ENSMMOG00000016026	cstf3	95	95.621	Mola_mola
ENSKMAG00000010916	cstf3	98	80.198	ENSMODG00000025205	-	99	80.198	Monodelphis_domestica
ENSKMAG00000010916	cstf3	100	89.972	ENSMODG00000009745	-	100	89.972	Monodelphis_domestica
ENSKMAG00000010916	cstf3	100	95.112	ENSMALG00000012050	cstf3	100	95.112	Monopterus_albus
ENSKMAG00000010916	cstf3	99	90.210	MGP_CAROLIEiJ_G0024026	Cstf3	99	90.210	Mus_caroli
ENSKMAG00000010916	cstf3	99	90.210	ENSMUSG00000027176	Cstf3	99	90.210	Mus_musculus
ENSKMAG00000010916	cstf3	99	90.210	MGP_PahariEiJ_G0025464	Cstf3	99	90.210	Mus_pahari
ENSKMAG00000010916	cstf3	99	90.210	MGP_SPRETEiJ_G0024939	Cstf3	99	90.210	Mus_spretus
ENSKMAG00000010916	cstf3	99	90.210	ENSMPUG00000011457	CSTF3	99	90.210	Mustela_putorius_furo
ENSKMAG00000010916	cstf3	99	90.819	ENSMLUG00000003073	-	99	90.819	Myotis_lucifugus
ENSKMAG00000010916	cstf3	99	88.277	ENSMLUG00000026022	-	99	88.277	Myotis_lucifugus
ENSKMAG00000010916	cstf3	99	90.590	ENSNGAG00000010677	Cstf3	99	90.590	Nannospalax_galili
ENSKMAG00000010916	cstf3	87	96.629	ENSNBRG00000007345	cstf3	100	96.629	Neolamprologus_brichardi
ENSKMAG00000010916	cstf3	100	89.833	ENSNLEG00000017901	CSTF3	97	93.764	Nomascus_leucogenys
ENSKMAG00000010916	cstf3	73	90.057	ENSMEUG00000005640	-	100	90.057	Notamacropus_eugenii
ENSKMAG00000010916	cstf3	69	92.593	ENSOPRG00000000199	-	64	92.593	Ochotona_princeps
ENSKMAG00000010916	cstf3	89	78.459	ENSODEG00000006311	-	97	78.459	Octodon_degus
ENSKMAG00000010916	cstf3	99	90.210	ENSODEG00000016737	-	99	90.210	Octodon_degus
ENSKMAG00000010916	cstf3	98	96.444	ENSONIG00000005563	cstf3	100	95.670	Oreochromis_niloticus
ENSKMAG00000010916	cstf3	90	89.385	ENSOANG00000015140	CSTF3	100	89.385	Ornithorhynchus_anatinus
ENSKMAG00000010916	cstf3	99	90.210	ENSOCUG00000015417	CSTF3	99	90.210	Oryctolagus_cuniculus
ENSKMAG00000010916	cstf3	100	94.972	ENSORLG00000009762	cstf3	100	94.972	Oryzias_latipes
ENSKMAG00000010916	cstf3	100	94.972	ENSORLG00020005540	cstf3	100	94.972	Oryzias_latipes_hni
ENSKMAG00000010916	cstf3	100	94.832	ENSORLG00015003551	cstf3	100	94.832	Oryzias_latipes_hsok
ENSKMAG00000010916	cstf3	100	95.391	ENSOMEG00000003848	cstf3	100	95.391	Oryzias_melastigma
ENSKMAG00000010916	cstf3	100	89.320	ENSOGAG00000010229	CSTF3	100	89.320	Otolemur_garnettii
ENSKMAG00000010916	cstf3	90	90.358	ENSOARG00000017271	CSTF3	99	90.358	Ovis_aries
ENSKMAG00000010916	cstf3	99	87.429	ENSPPAG00000027358	CSTF3	99	87.429	Pan_paniscus
ENSKMAG00000010916	cstf3	99	90.210	ENSPPRG00000016852	CSTF3	99	90.210	Panthera_pardus
ENSKMAG00000010916	cstf3	99	90.210	ENSPTIG00000008716	CSTF3	99	90.210	Panthera_tigris_altaica
ENSKMAG00000010916	cstf3	100	89.833	ENSPTRG00000003485	CSTF3	100	89.833	Pan_troglodytes
ENSKMAG00000010916	cstf3	100	89.833	ENSPANG00000013722	CSTF3	97	93.987	Papio_anubis
ENSKMAG00000010916	cstf3	100	92.329	ENSPKIG00000023648	cstf3	100	92.329	Paramormyrops_kingsleyae
ENSKMAG00000010916	cstf3	100	89.972	ENSPSIG00000009173	CSTF3	100	89.972	Pelodiscus_sinensis
ENSKMAG00000010916	cstf3	81	97.533	ENSPMGG00000000164	cstf3	99	96.168	Periophthalmus_magnuspinnatus
ENSKMAG00000010916	cstf3	99	90.210	ENSPEMG00000011481	Cstf3	99	90.210	Peromyscus_maniculatus_bairdii
ENSKMAG00000010916	cstf3	99	78.852	ENSPMAG00000007282	cstf3	99	78.992	Petromyzon_marinus
ENSKMAG00000010916	cstf3	99	89.140	ENSPCIG00000026406	-	100	90.560	Phascolarctos_cinereus
ENSKMAG00000010916	cstf3	99	76.017	ENSPCIG00000030419	-	89	76.297	Phascolarctos_cinereus
ENSKMAG00000010916	cstf3	100	94.972	ENSPFOG00000017239	cstf3	100	94.972	Poecilia_formosa
ENSKMAG00000010916	cstf3	100	94.972	ENSPLAG00000009456	cstf3	100	94.972	Poecilia_latipinna
ENSKMAG00000010916	cstf3	100	94.972	ENSPMEG00000010320	cstf3	100	94.972	Poecilia_mexicana
ENSKMAG00000010916	cstf3	100	95.112	ENSPREG00000013549	cstf3	100	95.112	Poecilia_reticulata
ENSKMAG00000010916	cstf3	100	89.833	ENSPPYG00000003375	CSTF3	100	89.833	Pongo_abelii
ENSKMAG00000010916	cstf3	70	95.122	ENSPCAG00000008025	-	71	95.122	Procavia_capensis
ENSKMAG00000010916	cstf3	100	84.819	ENSPCOG00000014417	CSTF3	100	84.819	Propithecus_coquereli
ENSKMAG00000010916	cstf3	100	84.680	ENSPVAG00000002350	CSTF3	100	84.680	Pteropus_vampyrus
ENSKMAG00000010916	cstf3	98	96.302	ENSPNYG00000018259	cstf3	100	95.531	Pundamilia_nyererei
ENSKMAG00000010916	cstf3	100	93.305	ENSPNAG00000020182	cstf3	100	93.305	Pygocentrus_nattereri
ENSKMAG00000010916	cstf3	87	89.760	ENSRNOG00000012089	Cstf3	100	89.760	Rattus_norvegicus
ENSKMAG00000010916	cstf3	99	89.407	ENSRBIG00000044258	CSTF3	100	90.240	Rhinopithecus_bieti
ENSKMAG00000010916	cstf3	100	89.833	ENSRROG00000043450	CSTF3	100	90.240	Rhinopithecus_roxellana
ENSKMAG00000010916	cstf3	100	89.833	ENSSBOG00000024764	CSTF3	98	96.214	Saimiri_boliviensis_boliviensis
ENSKMAG00000010916	cstf3	99	90.350	ENSSHAG00000018128	-	99	90.350	Sarcophilus_harrisii
ENSKMAG00000010916	cstf3	100	80.780	ENSSHAG00000003135	-	99	80.780	Sarcophilus_harrisii
ENSKMAG00000010916	cstf3	100	93.026	ENSSFOG00015022133	cstf3	100	93.026	Scleropages_formosus
ENSKMAG00000010916	cstf3	100	94.972	ENSSMAG00000002197	cstf3	100	94.972	Scophthalmus_maximus
ENSKMAG00000010916	cstf3	100	96.089	ENSSDUG00000020426	cstf3	100	96.089	Seriola_dumerili
ENSKMAG00000010916	cstf3	100	95.950	ENSSLDG00000025649	cstf3	100	95.950	Seriola_lalandi_dorsalis
ENSKMAG00000010916	cstf3	100	89.694	ENSSARG00000000391	CSTF3	100	89.694	Sorex_araneus
ENSKMAG00000010916	cstf3	96	89.870	ENSSPUG00000010546	CSTF3	100	89.870	Sphenodon_punctatus
ENSKMAG00000010916	cstf3	100	96.508	ENSSPAG00000004958	cstf3	100	96.508	Stegastes_partitus
ENSKMAG00000010916	cstf3	99	90.678	ENSSSCG00000040954	CSTF3	99	90.678	Sus_scrofa
ENSKMAG00000010916	cstf3	99	90.113	ENSTGUG00000005010	CSTF3	100	90.113	Taeniopygia_guttata
ENSKMAG00000010916	cstf3	100	94.413	ENSTRUG00000004959	cstf3	100	94.413	Takifugu_rubripes
ENSKMAG00000010916	cstf3	99	95.198	ENSTNIG00000013811	cstf3	99	95.198	Tetraodon_nigroviridis
ENSKMAG00000010916	cstf3	89	88.162	ENSTBEG00000001544	CSTF3	90	88.162	Tupaia_belangeri
ENSKMAG00000010916	cstf3	100	87.187	ENSTTRG00000016366	CSTF3	100	87.187	Tursiops_truncatus
ENSKMAG00000010916	cstf3	99	90.678	ENSUMAG00000018971	CSTF3	100	90.080	Ursus_maritimus
ENSKMAG00000010916	cstf3	100	89.694	ENSVPAG00000007800	CSTF3	100	89.694	Vicugna_pacos
ENSKMAG00000010916	cstf3	99	90.819	ENSVVUG00000014938	CSTF3	100	90.240	Vulpes_vulpes
ENSKMAG00000010916	cstf3	70	40.213	ENSXETG00000017946	-	99	41.701	Xenopus_tropicalis
ENSKMAG00000010916	cstf3	88	75.312	ENSXETG00000021399	cstf3	100	76.537	Xenopus_tropicalis
ENSKMAG00000010916	cstf3	87	95.345	ENSXCOG00000011741	cstf3	100	95.345	Xiphophorus_couchianus
ENSKMAG00000010916	cstf3	100	94.972	ENSXMAG00000009545	cstf3	100	94.972	Xiphophorus_maculatus