EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000010987 (Gene tree)
Gene ID: -
Gene Symbol: tomm20a
Alias: arid4b|ch1073-321c8.1|wu:fk47b11
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 25860 bases
Position: chrLWHD01000078.1:2066225-2092084
Accession: 108240653
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000014765	Tudor-knot	PF11717.8	7.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000014979	-	3321	XM_017424260	ENSKMAP00000014765	1106 (aa)	XP_017279749	-
ENSKMAT00000014930	-	3072	-	ENSKMAP00000014716	1023 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000010987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000010987's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000010987	tomm20a	98	52.370	ENSG00000054267	ARID4B	89	54.265	Homo_sapiens
ENSKMAG00000010987	tomm20a	98	79.404	ENSAPOG00000010823	tomm20a	91	79.275	Acanthochromis_polyacanthus
ENSKMAG00000010987	tomm20a	97	85.294	ENSAMEG00000008801	ARID4B	89	52.009	Ailuropoda_melanoleuca
ENSKMAG00000010987	tomm20a	98	79.481	ENSACIG00000006313	tomm20a	93	91.429	Amphilophus_citrinellus
ENSKMAG00000010987	tomm20a	98	79.145	ENSAOCG00000003330	tomm20a	91	78.497	Amphiprion_ocellaris
ENSKMAG00000010987	tomm20a	98	79.275	ENSAPEG00000024018	tomm20a	91	78.627	Amphiprion_percula
ENSKMAG00000010987	tomm20a	98	79.475	ENSATEG00000014930	tomm20a	90	76.850	Anabas_testudineus
ENSKMAG00000010987	tomm20a	99	62.963	ENSAPLG00000004422	ARID4B	86	57.692	Anas_platyrhynchos
ENSKMAG00000010987	tomm20a	99	51.376	ENSACAG00000001289	ARID4B	89	56.651	Anolis_carolinensis
ENSKMAG00000010987	tomm20a	99	50.448	ENSANAG00000038088	ARID4B	88	54.265	Aotus_nancymaae
ENSKMAG00000010987	tomm20a	98	76.687	ENSACLG00000023521	tomm20a	98	76.527	Astatotilapia_calliptera
ENSKMAG00000010987	tomm20a	86	84.541	ENSAMXG00000003657	tomm20a	93	76.776	Astyanax_mexicanus
ENSKMAG00000010987	tomm20a	98	52.370	ENSBTAG00000000222	ARID4B	88	54.265	Bos_taurus
ENSKMAG00000010987	tomm20a	66	45.627	ENSCHIG00000020742	ARID4B	59	45.076	Capra_hircus
ENSKMAG00000010987	tomm20a	98	52.370	ENSCPOG00000034766	ARID4B	88	54.265	Cavia_porcellus
ENSKMAG00000010987	tomm20a	98	52.370	ENSCATG00000042166	ARID4B	88	54.502	Cercocebus_atys
ENSKMAG00000010987	tomm20a	98	52.370	ENSCLAG00000003255	ARID4B	88	54.502	Chinchilla_lanigera
ENSKMAG00000010987	tomm20a	51	95.238	ENSCHOG00000001152	ARID4B	61	95.238	Choloepus_hoffmanni
ENSKMAG00000010987	tomm20a	98	52.133	ENSCGRG00001014397	Arid4b	88	54.028	Cricetulus_griseus_chok1gshd
ENSKMAG00000010987	tomm20a	98	52.133	ENSCGRG00000004910	Arid4b	88	54.028	Cricetulus_griseus_crigri
ENSKMAG00000010987	tomm20a	98	74.757	ENSCSEG00000012928	tomm20a	92	72.010	Cynoglossus_semilaevis
ENSKMAG00000010987	tomm20a	98	75.110	ENSCVAG00000003244	tomm20a	95	74.433	Cyprinodon_variegatus
ENSKMAG00000010987	tomm20a	100	57.439	ENSDARG00000090656	tomm20a	91	61.176	Danio_rerio
ENSKMAG00000010987	tomm20a	97	86.139	ENSDORG00000006422	Arid4b	87	52.683	Dipodomys_ordii
ENSKMAG00000010987	tomm20a	97	47.005	ENSETEG00000005596	ARID4B	67	86.139	Echinops_telfairi
ENSKMAG00000010987	tomm20a	61	84.314	ENSELUG00000018441	tomm20a	78	79.612	Esox_lucius
ENSKMAG00000010987	tomm20a	98	53.428	ENSFALG00000013548	ARID4B	86	55.319	Ficedula_albicollis
ENSKMAG00000010987	tomm20a	98	51.896	ENSFDAG00000014194	ARID4B	88	54.028	Fukomys_damarensis
ENSKMAG00000010987	tomm20a	98	76.409	ENSFHEG00000003798	tomm20a	90	73.856	Fundulus_heteroclitus
ENSKMAG00000010987	tomm20a	91	75.895	ENSGMOG00000018747	tomm20a	84	70.238	Gadus_morhua
ENSKMAG00000010987	tomm20a	98	70.274	ENSGACG00000004298	tomm20a	91	71.186	Gasterosteus_aculeatus
ENSKMAG00000010987	tomm20a	95	84.762	ENSGAGG00000020544	ARID4B	87	68.205	Gopherus_agassizii
ENSKMAG00000010987	tomm20a	98	76.372	ENSHBUG00000020369	tomm20a	91	75.895	Haplochromis_burtoni
ENSKMAG00000010987	tomm20a	98	52.133	ENSHGLG00000012546	ARID4B	89	54.028	Heterocephalus_glaber_female
ENSKMAG00000010987	tomm20a	98	52.133	ENSHGLG00100015436	ARID4B	89	54.028	Heterocephalus_glaber_male
ENSKMAG00000010987	tomm20a	98	70.648	ENSHCOG00000010376	tomm20a	93	88.571	Hippocampus_comes
ENSKMAG00000010987	tomm20a	99	82.353	ENSIPUG00000014234	arid4b	90	56.505	Ictalurus_punctatus
ENSKMAG00000010987	tomm20a	98	52.844	ENSSTOG00000002810	ARID4B	88	54.739	Ictidomys_tridecemlineatus
ENSKMAG00000010987	tomm20a	98	52.607	ENSJJAG00000021368	Arid4b	87	54.502	Jaculus_jaculus
ENSKMAG00000010987	tomm20a	99	85.047	ENSLOCG00000015899	tomm20a	89	57.381	Lepisosteus_oculatus
ENSKMAG00000010987	tomm20a	98	52.370	ENSMFAG00000044016	ARID4B	88	54.502	Macaca_fascicularis
ENSKMAG00000010987	tomm20a	98	52.370	ENSMMUG00000007141	ARID4B	88	54.502	Macaca_mulatta
ENSKMAG00000010987	tomm20a	98	52.370	ENSMNEG00000014840	ARID4B	88	54.502	Macaca_nemestrina
ENSKMAG00000010987	tomm20a	97	52.153	ENSMLEG00000033583	ARID4B	88	54.306	Mandrillus_leucophaeus
ENSKMAG00000010987	tomm20a	91	76.850	ENSMAMG00000017134	tomm20a	90	76.372	Mastacembelus_armatus
ENSKMAG00000010987	tomm20a	98	76.134	ENSMZEG00005009879	tomm20a	91	75.656	Maylandia_zebra
ENSKMAG00000010987	tomm20a	98	52.955	ENSMGAG00000011896	ARID4B	87	54.846	Meleagris_gallopavo
ENSKMAG00000010987	tomm20a	98	52.370	ENSMICG00000016358	ARID4B	89	54.265	Microcebus_murinus
ENSKMAG00000010987	tomm20a	98	84.392	ENSMMOG00000000561	tomm20a	93	91.803	Mola_mola
ENSKMAG00000010987	tomm20a	97	85.149	ENSMODG00000008417	ARID4B	88	52.683	Monodelphis_domestica
ENSKMAG00000010987	tomm20a	98	74.140	ENSMALG00000005205	tomm20a	92	76.051	Monopterus_albus
ENSKMAG00000010987	tomm20a	97	86.139	MGP_CAROLIEiJ_G0018236	Arid4b	88	52.439	Mus_caroli
ENSKMAG00000010987	tomm20a	97	86.139	ENSMUSG00000039219	Arid4b	88	51.951	Mus_musculus
ENSKMAG00000010987	tomm20a	98	52.133	MGP_PahariEiJ_G0019286	Arid4b	88	54.028	Mus_pahari
ENSKMAG00000010987	tomm20a	98	73.387	MGP_SPRETEiJ_G0019094	Arid4b	88	52.195	Mus_spretus
ENSKMAG00000010987	tomm20a	98	52.370	ENSMPUG00000002906	ARID4B	88	54.265	Mustela_putorius_furo
ENSKMAG00000010987	tomm20a	99	49.779	ENSNGAG00000014629	Arid4b	88	54.028	Nannospalax_galili
ENSKMAG00000010987	tomm20a	98	78.302	ENSNBRG00000019684	tomm20a	93	92.593	Neolamprologus_brichardi
ENSKMAG00000010987	tomm20a	98	52.607	ENSNLEG00000002665	ARID4B	88	54.739	Nomascus_leucogenys
ENSKMAG00000010987	tomm20a	98	52.370	ENSODEG00000005373	ARID4B	87	54.265	Octodon_degus
ENSKMAG00000010987	tomm20a	100	75.476	ENSORLG00000012510	tomm20a	91	72.857	Oryzias_latipes
ENSKMAG00000010987	tomm20a	100	74.363	ENSORLG00020013988	tomm20a	93	88.115	Oryzias_latipes_hni
ENSKMAG00000010987	tomm20a	100	74.638	ENSORLG00015022835	tomm20a	93	88.525	Oryzias_latipes_hsok
ENSKMAG00000010987	tomm20a	99	75.300	ENSOMEG00000000521	tomm20a	90	74.341	Oryzias_melastigma
ENSKMAG00000010987	tomm20a	98	64.151	ENSOGAG00000012476	ARID4B	88	50.572	Otolemur_garnettii
ENSKMAG00000010987	tomm20a	95	85.294	ENSOARG00000003481	ARID4B	87	52.009	Ovis_aries
ENSKMAG00000010987	tomm20a	98	51.422	ENSPANG00000013611	ARID4B	88	53.555	Papio_anubis
ENSKMAG00000010987	tomm20a	90	46.077	ENSPSIG00000011632	ARID4B	87	49.258	Pelodiscus_sinensis
ENSKMAG00000010987	tomm20a	99	73.061	ENSPCIG00000029756	ARID4B	83	85.057	Phascolarctos_cinereus
ENSKMAG00000010987	tomm20a	98	78.860	ENSPFOG00000019430	tomm20a	92	73.879	Poecilia_formosa
ENSKMAG00000010987	tomm20a	98	78.860	ENSPLAG00000010554	tomm20a	90	75.616	Poecilia_latipinna
ENSKMAG00000010987	tomm20a	98	91.935	ENSPMEG00000003093	tomm20a	84	91.463	Poecilia_mexicana
ENSKMAG00000010987	tomm20a	98	91.935	ENSPREG00000007996	tomm20a	84	91.463	Poecilia_reticulata
ENSKMAG00000010987	tomm20a	98	52.370	ENSPCOG00000024328	ARID4B	88	54.265	Propithecus_coquereli
ENSKMAG00000010987	tomm20a	84	62.722	ENSPVAG00000015159	ARID4B	87	54.739	Pteropus_vampyrus
ENSKMAG00000010987	tomm20a	98	75.871	ENSPNYG00000013988	tomm20a	90	90.000	Pundamilia_nyererei
ENSKMAG00000010987	tomm20a	99	71.190	ENSPNAG00000000523	tomm20a	84	62.857	Pygocentrus_nattereri
ENSKMAG00000010987	tomm20a	75	86.139	ENSRNOG00000016391	LOC100912163	72	86.139	Rattus_norvegicus
ENSKMAG00000010987	tomm20a	62	86.139	ENSRBIG00000042029	ARID4B	85	65.909	Rhinopithecus_bieti
ENSKMAG00000010987	tomm20a	75	86.139	ENSRROG00000045203	ARID4B	88	66.000	Rhinopithecus_roxellana
ENSKMAG00000010987	tomm20a	73	73.600	ENSSHAG00000015214	ARID4B	88	52.311	Sarcophilus_harrisii
ENSKMAG00000010987	tomm20a	76	89.130	ENSSFOG00015008923	tomm20a	86	89.130	Scleropages_formosus
ENSKMAG00000010987	tomm20a	98	80.992	ENSSFOG00015000132	arid4b	89	60.488	Scleropages_formosus
ENSKMAG00000010987	tomm20a	98	75.418	ENSSMAG00000010430	tomm20a	89	75.515	Scophthalmus_maximus
ENSKMAG00000010987	tomm20a	98	78.859	ENSSDUG00000003019	tomm20a	91	78.210	Seriola_dumerili
ENSKMAG00000010987	tomm20a	98	52.009	ENSSPUG00000015466	ARID4B	88	57.075	Sphenodon_punctatus
ENSKMAG00000010987	tomm20a	98	78.998	ENSSPAG00000007358	tomm20a	92	77.440	Stegastes_partitus
ENSKMAG00000010987	tomm20a	98	55.529	ENSTGUG00000010246	ARID4B	89	55.059	Taeniopygia_guttata
ENSKMAG00000010987	tomm20a	65	70.155	ENSTRUG00000002893	tomm20a	85	68.846	Takifugu_rubripes
ENSKMAG00000010987	tomm20a	74	60.688	ENSTBEG00000003961	ARID4B	67	57.494	Tupaia_belangeri
ENSKMAG00000010987	tomm20a	98	50.948	ENSTTRG00000002228	ARID4B	88	52.844	Tursiops_truncatus
ENSKMAG00000010987	tomm20a	96	48.768	ENSUMAG00000006905	ARID4B	89	50.739	Ursus_maritimus
ENSKMAG00000010987	tomm20a	62	61.111	ENSVPAG00000006841	ARID4B	55	61.111	Vicugna_pacos
ENSKMAG00000010987	tomm20a	100	62.044	ENSXETG00000024651	arid4b	77	61.783	Xenopus_tropicalis
ENSKMAG00000010987	tomm20a	98	92.742	ENSXMAG00000006538	tomm20a	84	92.035	Xiphophorus_maculatus