EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000011202 (Gene tree)
Gene ID: 108239602
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 239-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 4117 bases
Position: chrLWHD01000066.1:535569-539685
Accession: 108239602
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000014950	zf-C2H2	PF00096.26	2.2e-17	1	1
ENSKMAP00000014950	zf-met	PF12874.7	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000015167	-	3044	XM_017422407	ENSKMAP00000014950	487 (aa)	XP_017277896	UPI0007F8EF71

Gene Model

Click here to download ENSKMAG00000011202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000011202's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000011202	-	56	38.095	ENSKMAG00000000543	-	95	36.585
ENSKMAG00000011202	-	58	35.821	ENSKMAG00000000597	-	95	37.306
ENSKMAG00000011202	-	52	35.417	ENSKMAG00000001091	-	59	32.184
ENSKMAG00000011202	-	55	39.773	ENSKMAG00000006231	-	94	39.773
ENSKMAG00000011202	-	53	31.515	ENSKMAG00000002963	zbtb48	51	31.515
ENSKMAG00000011202	-	56	32.796	ENSKMAG00000000689	-	90	39.024
ENSKMAG00000011202	-	55	39.881	ENSKMAG00000020046	-	75	39.881
ENSKMAG00000011202	-	51	31.556	ENSKMAG00000014002	si:ch211-79k12.2	77	33.735
ENSKMAG00000011202	-	56	45.055	ENSKMAG00000021817	znf236	57	45.055
ENSKMAG00000011202	-	56	35.802	ENSKMAG00000000668	-	76	35.802
ENSKMAG00000011202	-	52	38.415	ENSKMAG00000000073	-	76	37.195
ENSKMAG00000011202	-	52	36.316	ENSKMAG00000011111	-	98	40.179
ENSKMAG00000011202	-	54	46.753	ENSKMAG00000000795	-	99	42.188
ENSKMAG00000011202	-	51	37.143	ENSKMAG00000020025	-	80	37.143
ENSKMAG00000011202	-	59	34.555	ENSKMAG00000001192	-	75	33.511
ENSKMAG00000011202	-	53	33.939	ENSKMAG00000000620	-	54	33.939
ENSKMAG00000011202	-	69	46.334	ENSKMAG00000011226	-	51	46.334
ENSKMAG00000011202	-	56	30.072	ENSKMAG00000021194	-	64	51.064
ENSKMAG00000011202	-	76	61.022	ENSKMAG00000011214	-	64	61.022
ENSKMAG00000011202	-	56	42.857	ENSKMAG00000003940	-	90	42.857
ENSKMAG00000011202	-	72	48.333	ENSKMAG00000011235	-	51	47.075
ENSKMAG00000011202	-	51	34.756	ENSKMAG00000018636	-	91	34.756
ENSKMAG00000011202	-	50	33.333	ENSKMAG00000001084	-	77	48.052
ENSKMAG00000011202	-	52	37.629	ENSKMAG00000012202	-	74	37.629

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000011202	-	67	54.683	ENSAOCG00000011223	-	58	49.742	Amphiprion_ocellaris
ENSKMAG00000011202	-	67	46.201	ENSAOCG00000011236	-	53	44.384	Amphiprion_ocellaris
ENSKMAG00000011202	-	67	45.897	ENSAPEG00000007910	-	66	44.384	Amphiprion_percula
ENSKMAG00000011202	-	67	54.381	ENSAPEG00000007889	-	86	71.795	Amphiprion_percula
ENSKMAG00000011202	-	71	51.381	ENSATEG00000011955	-	51	53.022	Anabas_testudineus
ENSKMAG00000011202	-	79	48.731	ENSAMXG00000032845	-	92	48.731	Astyanax_mexicanus
ENSKMAG00000011202	-	60	38.172	ENSCSAVG00000009574	-	99	39.506	Ciona_savignyi
ENSKMAG00000011202	-	63	34.104	ENSCSAVG00000005896	-	68	34.104	Ciona_savignyi
ENSKMAG00000011202	-	73	36.029	ENSCSEG00000005491	-	83	36.029	Cynoglossus_semilaevis
ENSKMAG00000011202	-	56	39.024	ENSCVAG00000002295	-	90	35.407	Cyprinodon_variegatus
ENSKMAG00000011202	-	52	38.037	ENSFHEG00000003596	-	57	38.037	Fundulus_heteroclitus
ENSKMAG00000011202	-	55	31.902	ENSFHEG00000020889	-	71	34.132	Fundulus_heteroclitus
ENSKMAG00000011202	-	60	34.677	ENSHCOG00000014881	-	59	37.640	Hippocampus_comes
ENSKMAG00000011202	-	71	35.135	ENSHCOG00000008181	-	69	35.135	Hippocampus_comes
ENSKMAG00000011202	-	71	51.268	ENSMALG00000017354	-	63	51.268	Monopterus_albus
ENSKMAG00000011202	-	55	38.514	ENSONIG00000007812	-	100	38.514	Oreochromis_niloticus
ENSKMAG00000011202	-	53	35.503	ENSOMEG00000017673	-	62	35.503	Oryzias_melastigma
ENSKMAG00000011202	-	51	40.000	ENSPMGG00000022524	-	98	40.000	Periophthalmus_magnuspinnatus
ENSKMAG00000011202	-	60	35.849	ENSPMGG00000010563	-	73	35.849	Periophthalmus_magnuspinnatus
ENSKMAG00000011202	-	52	41.434	ENSPMGG00000019842	-	92	41.434	Periophthalmus_magnuspinnatus
ENSKMAG00000011202	-	55	35.751	ENSPLAG00000006174	-	82	34.010	Poecilia_latipinna
ENSKMAG00000011202	-	70	40.854	ENSPMEG00000022676	-	99	40.854	Poecilia_mexicana
ENSKMAG00000011202	-	93	42.017	ENSPMEG00000021927	-	97	42.017	Poecilia_mexicana
ENSKMAG00000011202	-	66	36.810	ENSPMEG00000019229	-	74	36.810	Poecilia_mexicana
ENSKMAG00000011202	-	66	36.196	ENSPREG00000007146	-	64	36.196	Poecilia_reticulata
ENSKMAG00000011202	-	55	56.061	ENSSMAG00000000404	-	95	51.316	Scophthalmus_maximus
ENSKMAG00000011202	-	57	37.931	ENSSDUG00000000946	-	95	52.632	Seriola_dumerili
ENSKMAG00000011202	-	60	60.959	ENSSDUG00000009322	-	51	55.923	Seriola_dumerili
ENSKMAG00000011202	-	77	52.231	ENSSDUG00000009314	-	54	53.281	Seriola_dumerili
ENSKMAG00000011202	-	60	60.959	ENSSLDG00000012635	-	52	55.923	Seriola_lalandi_dorsalis
ENSKMAG00000011202	-	64	44.615	ENSSPAG00000009405	-	60	54.113	Stegastes_partitus