EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000011214 (Gene tree)
Gene ID: 108239604
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 420-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 3975 bases
Position: chrLWHD01000066.1:539691-543665
Accession: 108239604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000014963	zf-C2H2	PF00096.26	1.2e-21	1	5
ENSKMAP00000014963	zf-C2H2	PF00096.26	1.2e-21	2	5
ENSKMAP00000014963	zf-C2H2	PF00096.26	1.2e-21	3	5
ENSKMAP00000014963	zf-C2H2	PF00096.26	1.2e-21	4	5
ENSKMAP00000014963	zf-C2H2	PF00096.26	1.2e-21	5	5
ENSKMAP00000014963	zf-met	PF12874.7	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000015180	-	3129	XM_017422410	ENSKMAP00000014963	573 (aa)	XP_017277899	UPI0007F8C9E8

Gene Model

Click here to download ENSKMAG00000011214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000011214's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000011214	-	50	34.007	ENSKMAG00000021716	-	59	38.342
ENSKMAG00000011214	-	64	61.022	ENSKMAG00000011202	-	76	61.022
ENSKMAG00000011214	-	50	40.972	ENSKMAG00000000073	-	76	38.172
ENSKMAG00000011214	-	51	37.056	ENSKMAG00000012202	-	81	42.029
ENSKMAG00000011214	-	99	43.252	ENSKMAG00000011226	-	94	43.252
ENSKMAG00000011214	-	53	37.500	ENSKMAG00000011031	-	63	37.500
ENSKMAG00000011214	-	51	33.508	ENSKMAG00000013745	-	58	34.715
ENSKMAG00000011214	-	99	42.045	ENSKMAG00000011235	-	89	41.789
ENSKMAG00000011214	-	56	32.500	ENSKMAG00000021584	znf384l	52	32.353

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000011214	-	50	38.728	ENSEBUG00000006233	-	60	38.728	Eptatretus_burgeri
ENSKMAG00000011214	-	52	41.104	ENSLAFG00000007752	-	98	41.104	Loxodonta_africana
ENSKMAG00000011214	-	51	41.566	ENSORLG00000029027	-	75	41.566	Oryzias_latipes
ENSKMAG00000011214	-	51	46.591	ENSORLG00020009943	-	92	38.037	Oryzias_latipes_hni
ENSKMAG00000011214	-	51	39.024	ENSORLG00015013160	-	97	40.123	Oryzias_latipes_hsok
ENSKMAG00000011214	-	52	45.455	ENSOMEG00000009816	-	98	42.574	Oryzias_melastigma
ENSKMAG00000011214	-	52	39.091	ENSOMEG00000019179	-	97	39.759	Oryzias_melastigma
ENSKMAG00000011214	-	56	39.645	ENSOMEG00000010371	-	99	41.667	Oryzias_melastigma
ENSKMAG00000011214	-	51	40.361	ENSOMEG00000009568	-	95	53.125	Oryzias_melastigma
ENSKMAG00000011214	-	54	45.872	ENSOMEG00000012844	-	99	39.759	Oryzias_melastigma