EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000011226 (Gene tree)
Gene ID: 108239597
Gene Symbol: -
Alias: -
Full Name: zinc finger and SCAN domain-containing protein 10-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 3438 bases
Position: chrLWHD01000066.1:544319-547756
Accession: 108239597
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000014975	zf-C2H2	PF00096.26	2.3e-13	1	2
ENSKMAP00000014975	zf-C2H2	PF00096.26	2.3e-13	2	2
ENSKMAP00000014975	zf-met	PF12874.7	1.1e-07	1	2
ENSKMAP00000014975	zf-met	PF12874.7	1.1e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000015192	-	2335	XM_017422401	ENSKMAP00000014975	647 (aa)	XP_017277890	UPI0007F882EC

Gene Model

Click here to download ENSKMAG00000011226's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000011226's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000011226	-	51	40.000	ENSKMAG00000000795	-	99	38.788
ENSKMAG00000011226	-	58	38.421	ENSKMAG00000006231	-	99	46.429
ENSKMAG00000011226	-	51	46.334	ENSKMAG00000011202	-	69	46.334
ENSKMAG00000011226	-	98	57.009	ENSKMAG00000011235	-	93	57.009
ENSKMAG00000011226	-	94	43.252	ENSKMAG00000011214	-	99	43.252

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000011226	-	99	44.292	ENSAOCG00000011236	-	93	44.833	Amphiprion_ocellaris
ENSKMAG00000011226	-	99	45.344	ENSAOCG00000011223	-	95	45.579	Amphiprion_ocellaris
ENSKMAG00000011226	-	99	45.510	ENSAPEG00000007910	-	93	45.137	Amphiprion_percula
ENSKMAG00000011226	-	99	45.038	ENSAPEG00000007889	-	86	63.492	Amphiprion_percula
ENSKMAG00000011226	-	99	49.550	ENSATEG00000011955	-	92	49.925	Anabas_testudineus
ENSKMAG00000011226	-	99	36.682	ENSCVAG00000009534	-	72	37.160	Cyprinodon_variegatus
ENSKMAG00000011226	-	97	47.806	ENSMALG00000017354	-	93	48.363	Monopterus_albus
ENSKMAG00000011226	-	51	39.326	ENSPMGG00000010664	-	90	39.326	Periophthalmus_magnuspinnatus
ENSKMAG00000011226	-	70	64.865	ENSPMEG00000021927	-	97	64.865	Poecilia_mexicana
ENSKMAG00000011226	-	98	50.923	ENSSDUG00000009314	-	91	51.302	Seriola_dumerili
ENSKMAG00000011226	-	97	47.678	ENSSDUG00000009322	-	93	48.193	Seriola_dumerili
ENSKMAG00000011226	-	98	50.615	ENSSLDG00000012635	-	93	50.000	Seriola_lalandi_dorsalis
ENSKMAG00000011226	-	52	43.064	ENSSPAG00000009405	-	87	43.626	Stegastes_partitus