EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000011235 (Gene tree)
Gene ID: 108239600
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC108239600
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 3396 bases
Position: chrLWHD01000066.1:549002-552397
Accession: 108239600
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000014991	zf-C2H2	PF00096.26	6.2e-12	1	3
ENSKMAP00000014991	zf-C2H2	PF00096.26	6.2e-12	2	3
ENSKMAP00000014991	zf-C2H2	PF00096.26	6.2e-12	3	3
ENSKMAP00000014991	zf-met	PF12874.7	2e-08	1	2
ENSKMAP00000014991	zf-met	PF12874.7	2e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000015208	-	2421	XM_017422404	ENSKMAP00000014991	687 (aa)	XP_017277893	UPI0007F8A5ED

Gene Model

Click here to download ENSKMAG00000011235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000011235's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000011235	-	93	57.009	ENSKMAG00000011226	-	98	57.009
ENSKMAG00000011235	-	89	41.789	ENSKMAG00000011214	-	99	42.045
ENSKMAG00000011235	-	51	47.075	ENSKMAG00000011202	-	72	48.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000011235	-	97	46.233	ENSAOCG00000011223	-	98	46.903	Amphiprion_ocellaris
ENSKMAG00000011235	-	95	41.892	ENSAOCG00000011236	-	94	42.793	Amphiprion_ocellaris
ENSKMAG00000011235	-	95	42.342	ENSAPEG00000007910	-	94	43.243	Amphiprion_percula
ENSKMAG00000011235	-	97	46.086	ENSAPEG00000007889	-	84	62.112	Amphiprion_percula
ENSKMAG00000011235	-	94	50.298	ENSATEG00000011955	-	94	50.595	Anabas_testudineus
ENSKMAG00000011235	-	98	38.640	ENSCVAG00000009534	-	76	39.174	Cyprinodon_variegatus
ENSKMAG00000011235	-	92	51.201	ENSMALG00000017354	-	92	51.420	Monopterus_albus
ENSKMAG00000011235	-	68	65.421	ENSPMEG00000021927	-	99	65.421	Poecilia_mexicana
ENSKMAG00000011235	-	92	51.318	ENSSDUG00000009322	-	94	50.597	Seriola_dumerili
ENSKMAG00000011235	-	97	49.633	ENSSDUG00000009314	-	94	50.812	Seriola_dumerili
ENSKMAG00000011235	-	97	50.074	ENSSLDG00000012635	-	94	51.403	Seriola_lalandi_dorsalis
ENSKMAG00000011235	-	51	45.533	ENSSPAG00000009405	-	88	46.264	Stegastes_partitus