EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000011291 (Gene tree)
Gene ID: 108231607
Gene Symbol: rpl29
Alias: zgc:92868
Full Name: ribosomal protein L29
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 4168 bases
Position: chrLWHD01000012.1:1020298-1024465
Accession: 108231607
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000015074	Ribosomal_L29e	PF01779.17	5.6e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000015292	-	2049	XM_017408729	ENSKMAP00000015074	64 (aa)	XP_017264218	UPI0007F902E6

Gene Model

Click here to download ENSKMAG00000011291's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000011291's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000011291	rpl29	72	100.000	ENSG00000162244	RPL29	97	94.444	Homo_sapiens
ENSKMAG00000011291	rpl29	84	90.741	ENSAPOG00000002586	rpl29	84	90.741	Acanthochromis_polyacanthus
ENSKMAG00000011291	rpl29	84	96.296	ENSACIG00000018340	rpl29	84	96.296	Amphilophus_citrinellus
ENSKMAG00000011291	rpl29	84	94.444	ENSAOCG00000016652	rpl29	84	94.444	Amphiprion_ocellaris
ENSKMAG00000011291	rpl29	84	94.444	ENSAPEG00000005754	rpl29	84	94.444	Amphiprion_percula
ENSKMAG00000011291	rpl29	72	97.826	ENSACAG00000006888	RPL29	83	98.148	Anolis_carolinensis
ENSKMAG00000011291	rpl29	72	100.000	ENSANAG00000024147	-	77	82.609	Aotus_nancymaae
ENSKMAG00000011291	rpl29	100	93.750	ENSACLG00000017820	rpl29	84	98.148	Astatotilapia_calliptera
ENSKMAG00000011291	rpl29	100	87.500	ENSAMXG00000038794	rpl29	84	96.296	Astyanax_mexicanus
ENSKMAG00000011291	rpl29	84	59.259	WBGene00004443	rpl-29	87	59.259	Caenorhabditis_elegans
ENSKMAG00000011291	rpl29	72	100.000	ENSCJAG00000042339	-	77	82.609	Callithrix_jacchus
ENSKMAG00000011291	rpl29	72	100.000	ENSCCAG00000027980	-	58	100.000	Cebus_capucinus
ENSKMAG00000011291	rpl29	81	76.923	ENSCING00000018496	-	90	76.923	Ciona_intestinalis
ENSKMAG00000011291	rpl29	81	78.846	ENSCSAVG00000005231	-	88	78.846	Ciona_savignyi
ENSKMAG00000011291	rpl29	86	100.000	ENSCGRG00001016452	-	81	100.000	Cricetulus_griseus_chok1gshd
ENSKMAG00000011291	rpl29	78	96.000	ENSCSEG00000010267	rpl29	82	94.444	Cynoglossus_semilaevis
ENSKMAG00000011291	rpl29	100	96.875	ENSCVAG00000023098	rpl29	100	96.875	Cyprinodon_variegatus
ENSKMAG00000011291	rpl29	100	87.500	ENSDARG00000077717	rpl29	83	100.000	Danio_rerio
ENSKMAG00000011291	rpl29	78	64.000	FBgn0016726	RpL29	66	64.000	Drosophila_melanogaster
ENSKMAG00000011291	rpl29	67	90.698	ENSEASG00005005507	-	66	90.698	Equus_asinus_asinus
ENSKMAG00000011291	rpl29	95	81.967	ENSELUG00000015592	RL29	76	88.679	Esox_lucius
ENSKMAG00000011291	rpl29	67	72.093	ENSFCAG00000035470	-	58	70.455	Felis_catus
ENSKMAG00000011291	rpl29	81	71.154	ENSFCAG00000043006	-	64	71.154	Felis_catus
ENSKMAG00000011291	rpl29	72	93.478	ENSFALG00000008925	RPL29	79	94.444	Ficedula_albicollis
ENSKMAG00000011291	rpl29	100	96.875	ENSFHEG00000015425	rpl29	100	96.875	Fundulus_heteroclitus
ENSKMAG00000011291	rpl29	84	87.037	ENSGMOG00000003626	rpl29	71	87.037	Gadus_morhua
ENSKMAG00000011291	rpl29	86	98.182	ENSGALG00000026978	RPL29	77	98.182	Gallus_gallus
ENSKMAG00000011291	rpl29	100	96.875	ENSGAFG00000012868	rpl29	100	96.875	Gambusia_affinis
ENSKMAG00000011291	rpl29	98	88.889	ENSGACG00000007041	rpl29	70	94.444	Gasterosteus_aculeatus
ENSKMAG00000011291	rpl29	72	79.167	ENSGAGG00000024203	-	89	79.167	Gopherus_agassizii
ENSKMAG00000011291	rpl29	72	100.000	ENSGGOG00000024691	RPL29	62	94.595	Gorilla_gorilla
ENSKMAG00000011291	rpl29	100	93.750	ENSHBUG00000010519	rpl29	84	98.148	Haplochromis_burtoni
ENSKMAG00000011291	rpl29	78	96.000	ENSHCOG00000000478	rpl29	69	96.296	Hippocampus_comes
ENSKMAG00000011291	rpl29	100	89.062	ENSIPUG00000001196	rpl29	84	96.296	Ictalurus_punctatus
ENSKMAG00000011291	rpl29	84	92.593	ENSLBEG00000016213	rpl29	79	92.593	Labrus_bergylta
ENSKMAG00000011291	rpl29	95	88.525	ENSLACG00000018622	rpl29	84	90.741	Latimeria_chalumnae
ENSKMAG00000011291	rpl29	91	89.655	ENSLACG00000018031	-	79	90.741	Latimeria_chalumnae
ENSKMAG00000011291	rpl29	72	95.652	ENSLOCG00000013798	rpl29	83	96.296	Lepisosteus_oculatus
ENSKMAG00000011291	rpl29	84	94.444	ENSMAMG00000014274	rpl29	57	94.444	Mastacembelus_armatus
ENSKMAG00000011291	rpl29	100	93.750	ENSMZEG00005013519	rpl29	84	98.148	Maylandia_zebra
ENSKMAG00000011291	rpl29	86	98.182	ENSMGAG00000001213	RPL29	77	98.182	Meleagris_gallopavo
ENSKMAG00000011291	rpl29	77	85.714	ENSMICG00000049466	-	74	85.714	Microcebus_murinus
ENSKMAG00000011291	rpl29	100	90.625	ENSMMOG00000010430	rpl29	84	94.444	Mola_mola
ENSKMAG00000011291	rpl29	84	96.296	ENSMALG00000009023	rpl29	69	96.296	Monopterus_albus
ENSKMAG00000011291	rpl29	72	100.000	ENSMUSG00000048758	Rpl29	79	100.000	Mus_musculus
ENSKMAG00000011291	rpl29	100	93.750	ENSNBRG00000022109	rpl29	84	98.148	Neolamprologus_brichardi
ENSKMAG00000011291	rpl29	95	96.721	ENSONIG00000014377	rpl29	97	96.721	Oreochromis_niloticus
ENSKMAG00000011291	rpl29	100	92.188	ENSORLG00000023610	rpl29	57	96.296	Oryzias_latipes
ENSKMAG00000011291	rpl29	100	92.188	ENSORLG00020018665	rpl29	57	96.296	Oryzias_latipes_hni
ENSKMAG00000011291	rpl29	100	92.188	ENSORLG00015014455	rpl29	57	96.296	Oryzias_latipes_hsok
ENSKMAG00000011291	rpl29	100	93.750	ENSOMEG00000019919	rpl29	84	98.148	Oryzias_melastigma
ENSKMAG00000011291	rpl29	56	97.222	ENSPPAG00000037142	-	61	97.222	Pan_paniscus
ENSKMAG00000011291	rpl29	81	75.000	ENSPPRG00000011689	-	80	75.000	Panthera_pardus
ENSKMAG00000011291	rpl29	81	73.077	ENSPTIG00000011913	-	63	73.077	Panthera_tigris_altaica
ENSKMAG00000011291	rpl29	72	100.000	ENSPTRG00000043237	RPL29	63	94.595	Pan_troglodytes
ENSKMAG00000011291	rpl29	72	93.478	ENSPKIG00000025048	rpl29	82	94.444	Paramormyrops_kingsleyae
ENSKMAG00000011291	rpl29	91	96.552	ENSPSIG00000014699	RPL29	92	96.552	Pelodiscus_sinensis
ENSKMAG00000011291	rpl29	97	88.710	ENSPMGG00000005361	rpl29	79	92.593	Periophthalmus_magnuspinnatus
ENSKMAG00000011291	rpl29	95	96.721	ENSPFOG00000011385	rpl29	100	96.721	Poecilia_formosa
ENSKMAG00000011291	rpl29	78	96.000	ENSPLAG00000012042	rpl29	84	96.296	Poecilia_latipinna
ENSKMAG00000011291	rpl29	78	98.000	ENSPMEG00000018297	rpl29	84	98.148	Poecilia_mexicana
ENSKMAG00000011291	rpl29	78	98.000	ENSPREG00000007066	rpl29	84	98.148	Poecilia_reticulata
ENSKMAG00000011291	rpl29	100	93.750	ENSPNYG00000019481	rpl29	84	98.148	Pundamilia_nyererei
ENSKMAG00000011291	rpl29	100	90.625	ENSPNAG00000007550	rpl29	84	100.000	Pygocentrus_nattereri
ENSKMAG00000011291	rpl29	81	90.385	ENSRNOG00000025794	AABR07021239.1	69	90.385	Rattus_norvegicus
ENSKMAG00000011291	rpl29	72	73.913	YFR032C-A	RPL29	78	73.913	Saccharomyces_cerevisiae
ENSKMAG00000011291	rpl29	84	94.444	ENSSMAG00000013571	rpl29	84	94.444	Scophthalmus_maximus
ENSKMAG00000011291	rpl29	72	65.957	ENSSDUG00000020458	-	76	65.957	Seriola_dumerili
ENSKMAG00000011291	rpl29	78	96.000	ENSSDUG00000016140	rpl29	83	96.226	Seriola_dumerili
ENSKMAG00000011291	rpl29	78	96.000	ENSSLDG00000003932	rpl29	83	96.226	Seriola_lalandi_dorsalis
ENSKMAG00000011291	rpl29	72	97.826	ENSSPUG00000003760	RPL29	86	98.148	Sphenodon_punctatus
ENSKMAG00000011291	rpl29	84	87.037	ENSSPAG00000020292	rpl29	84	87.037	Stegastes_partitus
ENSKMAG00000011291	rpl29	84	70.370	ENSSSCG00000031314	-	83	69.811	Sus_scrofa
ENSKMAG00000011291	rpl29	59	94.737	ENSSSCG00000037047	-	94	95.652	Sus_scrofa
ENSKMAG00000011291	rpl29	72	93.478	ENSTGUG00000006027	RPL29	86	94.444	Taeniopygia_guttata
ENSKMAG00000011291	rpl29	97	85.484	ENSTRUG00000022273	rpl29	82	88.679	Takifugu_rubripes
ENSKMAG00000011291	rpl29	83	92.453	ENSTNIG00000014816	rpl29	78	92.453	Tetraodon_nigroviridis
ENSKMAG00000011291	rpl29	100	75.000	ENSTBEG00000000807	-	65	83.333	Tupaia_belangeri
ENSKMAG00000011291	rpl29	75	95.833	ENSUAMG00000002601	-	100	85.965	Ursus_americanus
ENSKMAG00000011291	rpl29	72	93.478	ENSVVUG00000012400	-	95	94.444	Vulpes_vulpes
ENSKMAG00000011291	rpl29	86	98.182	ENSXETG00000010811	rpl29	73	98.182	Xenopus_tropicalis
ENSKMAG00000011291	rpl29	100	95.312	ENSXCOG00000013543	rpl29	84	98.148	Xiphophorus_couchianus
ENSKMAG00000011291	rpl29	100	96.875	ENSXMAG00000020948	rpl29	100	96.875	Xiphophorus_maculatus