EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000011397 (Gene tree)
Gene ID: 108230899
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC108230899
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 4402 bases
Position: chrLWHD01000010.1:2035135-2039536
Accession: 108230899
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000015227	PABP	PF00658.18	8.7e-44	1	3
ENSKMAP00000015227	PABP	PF00658.18	8.7e-44	2	3
ENSKMAP00000015227	PABP	PF00658.18	8.7e-44	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000015447	-	2908	XM_017407527	ENSKMAP00000015227	212 (aa)	XP_017263016	UPI0007F8C2B4

Gene Model

Click here to download ENSKMAG00000011397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000011397's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000011397	-	99	82.547	ENSAPOG00000023881	-	99	82.547	Acanthochromis_polyacanthus
ENSKMAG00000011397	-	99	81.604	ENSAOCG00000019884	-	99	81.604	Amphiprion_ocellaris
ENSKMAG00000011397	-	99	81.604	ENSAPEG00000020987	-	99	81.604	Amphiprion_percula
ENSKMAG00000011397	-	99	78.302	ENSATEG00000013831	-	98	79.245	Anabas_testudineus
ENSKMAG00000011397	-	99	79.717	ENSACLG00000027916	-	99	79.717	Astatotilapia_calliptera
ENSKMAG00000011397	-	98	57.277	ENSAMXG00000041484	-	93	57.277	Astyanax_mexicanus
ENSKMAG00000011397	-	99	75.676	ENSCSEG00000001317	-	99	75.676	Cynoglossus_semilaevis
ENSKMAG00000011397	-	99	79.812	ENSCVAG00000000578	-	99	79.812	Cyprinodon_variegatus
ENSKMAG00000011397	-	99	68.692	ENSELUG00000001731	-	80	68.692	Esox_lucius
ENSKMAG00000011397	-	99	78.404	ENSFHEG00000007741	-	99	78.404	Fundulus_heteroclitus
ENSKMAG00000011397	-	99	72.283	ENSGAFG00000012983	-	67	72.283	Gambusia_affinis
ENSKMAG00000011397	-	99	77.358	ENSHBUG00000000185	-	61	77.358	Haplochromis_burtoni
ENSKMAG00000011397	-	99	69.907	ENSHCOG00000003117	-	100	69.907	Hippocampus_comes
ENSKMAG00000011397	-	99	82.547	ENSLBEG00000027847	-	95	82.547	Labrus_bergylta
ENSKMAG00000011397	-	95	59.848	ENSLOCG00000003085	-	93	57.718	Lepisosteus_oculatus
ENSKMAG00000011397	-	99	83.491	ENSMAMG00000017628	-	99	84.434	Mastacembelus_armatus
ENSKMAG00000011397	-	99	73.333	ENSMMOG00000004490	-	91	73.333	Mola_mola
ENSKMAG00000011397	-	99	82.160	ENSMALG00000004586	-	100	82.629	Monopterus_albus
ENSKMAG00000011397	-	99	79.888	ENSNBRG00000006752	-	74	79.888	Neolamprologus_brichardi
ENSKMAG00000011397	-	95	59.500	ENSPKIG00000005307	-	93	59.524	Paramormyrops_kingsleyae
ENSKMAG00000011397	-	100	65.385	ENSPMGG00000004590	-	98	65.385	Periophthalmus_magnuspinnatus
ENSKMAG00000011397	-	99	81.818	ENSPFOG00000023453	-	99	81.818	Poecilia_formosa
ENSKMAG00000011397	-	99	81.690	ENSPLAG00000003198	-	99	81.690	Poecilia_latipinna
ENSKMAG00000011397	-	97	78.531	ENSPMEG00000022008	-	64	78.531	Poecilia_mexicana
ENSKMAG00000011397	-	99	76.303	ENSPREG00000001981	-	99	76.303	Poecilia_reticulata
ENSKMAG00000011397	-	99	78.698	ENSPNYG00000004740	-	87	78.698	Pundamilia_nyererei
ENSKMAG00000011397	-	98	46.316	ENSPNAG00000018692	-	75	46.316	Pygocentrus_nattereri
ENSKMAG00000011397	-	99	64.286	ENSSFOG00015001322	-	95	64.286	Scleropages_formosus
ENSKMAG00000011397	-	99	77.934	ENSSMAG00000008778	-	100	78.404	Scophthalmus_maximus
ENSKMAG00000011397	-	99	82.547	ENSSDUG00000015116	-	98	82.547	Seriola_dumerili
ENSKMAG00000011397	-	99	82.075	ENSSLDG00000000425	-	98	82.075	Seriola_lalandi_dorsalis
ENSKMAG00000011397	-	99	84.434	ENSSPAG00000015141	-	99	84.434	Stegastes_partitus
ENSKMAG00000011397	-	99	75.349	ENSTRUG00000021899	-	99	75.349	Takifugu_rubripes
ENSKMAG00000011397	-	99	69.340	ENSTNIG00000002576	-	98	69.340	Tetraodon_nigroviridis
ENSKMAG00000011397	-	99	68.571	ENSXCOG00000001548	-	100	68.571	Xiphophorus_couchianus
ENSKMAG00000011397	-	99	82.160	ENSXMAG00000021863	-	99	82.160	Xiphophorus_maculatus