EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000011589 (Gene tree)
Gene ID: 108249921
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: la-related protein 1B-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 19309 bases
Position: chrLWHD01000517.1:101580-120888
Accession: 108249921
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000015560	La	PF05383.17	7.8e-20	1	1
ENSKMAP00000015530	La	PF05383.17	8.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000015754	-	4497	XM_017439570	ENSKMAP00000015530	1039 (aa)	XP_017295059	UPI0007F94121
ENSKMAT00000015785	-	4323	XM_017439574	ENSKMAP00000015560	981 (aa)	XP_017295063	UPI0007F87480

Gene Model

Click here to download ENSKMAG00000011589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000011589's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000011589	larp1b	94	52.780	ENSKMAG00000018468	larp1	98	53.185

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000011589	larp1b	89	53.878	ENSG00000138709	LARP1B	96	54.057	Homo_sapiens
ENSKMAG00000011589	larp1b	100	78.803	ENSAPOG00000020101	larp1b	99	77.920	Acanthochromis_polyacanthus
ENSKMAG00000011589	larp1b	54	50.604	ENSAMEG00000002748	LARP1B	99	48.705	Ailuropoda_melanoleuca
ENSKMAG00000011589	larp1b	100	71.815	ENSACIG00000023890	larp1b	99	73.263	Amphilophus_citrinellus
ENSKMAG00000011589	larp1b	89	74.807	ENSAOCG00000014268	larp1b	98	76.796	Amphiprion_ocellaris
ENSKMAG00000011589	larp1b	100	77.344	ENSAPEG00000004126	larp1b	99	78.418	Amphiprion_percula
ENSKMAG00000011589	larp1b	98	78.657	ENSATEG00000017849	larp1b	99	77.615	Anabas_testudineus
ENSKMAG00000011589	larp1b	86	55.249	ENSAPLG00000010129	LARP1B	99	54.477	Anas_platyrhynchos
ENSKMAG00000011589	larp1b	87	55.802	ENSACAG00000011338	LARP1B	93	55.673	Anolis_carolinensis
ENSKMAG00000011589	larp1b	64	51.972	ENSANAG00000034618	LARP1B	84	50.281	Aotus_nancymaae
ENSKMAG00000011589	larp1b	100	74.421	ENSACLG00000011948	larp1b	99	75.626	Astatotilapia_calliptera
ENSKMAG00000011589	larp1b	91	60.512	ENSAMXG00000006805	larp1b	87	60.426	Astyanax_mexicanus
ENSKMAG00000011589	larp1b	89	55.315	ENSBTAG00000012135	LARP1B	95	48.231	Bos_taurus
ENSKMAG00000011589	larp1b	85	55.459	ENSCJAG00000003338	LARP1B	99	54.754	Callithrix_jacchus
ENSKMAG00000011589	larp1b	85	58.968	ENSCAFG00000003831	LARP1B	99	57.932	Canis_familiaris
ENSKMAG00000011589	larp1b	85	56.910	ENSCAFG00020018899	LARP1B	94	55.973	Canis_lupus_dingo
ENSKMAG00000011589	larp1b	84	56.393	ENSCHIG00000023144	LARP1B	94	55.214	Capra_hircus
ENSKMAG00000011589	larp1b	85	55.016	ENSCCAG00000021948	LARP1B	95	54.725	Cebus_capucinus
ENSKMAG00000011589	larp1b	84	54.744	ENSCATG00000013541	LARP1B	95	53.897	Cercocebus_atys
ENSKMAG00000011589	larp1b	84	55.109	ENSCSAG00000003582	LARP1B	96	54.595	Chlorocebus_sabaeus
ENSKMAG00000011589	larp1b	84	52.909	ENSCHOG00000005354	LARP1B	96	51.451	Choloepus_hoffmanni
ENSKMAG00000011589	larp1b	97	52.358	ENSCPBG00000017480	LARP1B	95	52.642	Chrysemys_picta_bellii
ENSKMAG00000011589	larp1b	83	56.487	ENSCANG00000026958	LARP1B	95	55.658	Colobus_angolensis_palliatus
ENSKMAG00000011589	larp1b	99	72.134	ENSCSEG00000013519	larp1b	98	73.346	Cynoglossus_semilaevis
ENSKMAG00000011589	larp1b	100	74.257	ENSCVAG00000005046	larp1b	99	75.465	Cyprinodon_variegatus
ENSKMAG00000011589	larp1b	98	61.227	ENSDARG00000061169	larp1b	88	64.405	Danio_rerio
ENSKMAG00000011589	larp1b	50	50.838	ENSDNOG00000018765	-	98	49.348	Dasypus_novemcinctus
ENSKMAG00000011589	larp1b	75	54.709	ENSETEG00000012497	LARP1B	72	54.586	Echinops_telfairi
ENSKMAG00000011589	larp1b	87	46.800	ENSEBUG00000003668	larp1b	92	47.040	Eptatretus_burgeri
ENSKMAG00000011589	larp1b	86	54.241	ENSEASG00005018106	LARP1B	99	52.612	Equus_asinus_asinus
ENSKMAG00000011589	larp1b	91	53.754	ENSECAG00000001088	LARP1B	84	53.782	Equus_caballus
ENSKMAG00000011589	larp1b	77	63.636	ENSELUG00000023774	larp1b	99	56.401	Esox_lucius
ENSKMAG00000011589	larp1b	50	50.279	ENSFCAG00000014650	-	97	47.761	Felis_catus
ENSKMAG00000011589	larp1b	85	52.401	ENSFALG00000008098	LARP1B	94	53.611	Ficedula_albicollis
ENSKMAG00000011589	larp1b	100	77.073	ENSFHEG00000010264	larp1b	96	78.146	Fundulus_heteroclitus
ENSKMAG00000011589	larp1b	85	71.287	ENSGMOG00000005207	larp1b	83	71.617	Gadus_morhua
ENSKMAG00000011589	larp1b	93	52.715	ENSGALG00000010207	LARP1B	90	53.590	Gallus_gallus
ENSKMAG00000011589	larp1b	89	80.805	ENSGAFG00000012012	larp1b	99	79.080	Gambusia_affinis
ENSKMAG00000011589	larp1b	95	70.331	ENSGACG00000004609	larp1b	92	70.927	Gasterosteus_aculeatus
ENSKMAG00000011589	larp1b	91	54.702	ENSGAGG00000017209	LARP1B	93	53.198	Gopherus_agassizii
ENSKMAG00000011589	larp1b	84	54.989	ENSGGOG00000015900	LARP1B	96	54.148	Gorilla_gorilla
ENSKMAG00000011589	larp1b	100	74.733	ENSHBUG00000009730	larp1b	99	75.996	Haplochromis_burtoni
ENSKMAG00000011589	larp1b	71	76.738	ENSHCOG00000000918	larp1b	99	77.021	Hippocampus_comes
ENSKMAG00000011589	larp1b	94	64.249	ENSIPUG00000012138	larp1b	85	63.898	Ictalurus_punctatus
ENSKMAG00000011589	larp1b	97	82.234	ENSLBEG00000005655	larp1b	99	75.980	Labrus_bergylta
ENSKMAG00000011589	larp1b	94	57.791	ENSLACG00000015247	LARP1B	87	59.407	Latimeria_chalumnae
ENSKMAG00000011589	larp1b	90	61.104	ENSLOCG00000010684	larp1b	93	58.991	Lepisosteus_oculatus
ENSKMAG00000011589	larp1b	84	55.616	ENSMFAG00000002218	LARP1B	96	54.885	Macaca_fascicularis
ENSKMAG00000011589	larp1b	84	55.616	ENSMMUG00000021347	LARP1B	96	54.885	Macaca_mulatta
ENSKMAG00000011589	larp1b	83	54.064	ENSMNEG00000030406	LARP1B	95	54.340	Macaca_nemestrina
ENSKMAG00000011589	larp1b	83	56.300	ENSMLEG00000009306	LARP1B	95	54.971	Mandrillus_leucophaeus
ENSKMAG00000011589	larp1b	100	78.131	ENSMAMG00000000081	larp1b	99	78.984	Mastacembelus_armatus
ENSKMAG00000011589	larp1b	74	79.161	ENSMZEG00005002545	larp1b	95	79.296	Maylandia_zebra
ENSKMAG00000011589	larp1b	82	56.852	ENSMGAG00000004809	LARP1B	99	51.089	Meleagris_gallopavo
ENSKMAG00000011589	larp1b	50	39.923	ENSMICG00000028052	-	97	40.041	Microcebus_murinus
ENSKMAG00000011589	larp1b	85	56.754	ENSMICG00000036111	LARP1B	96	56.257	Microcebus_murinus
ENSKMAG00000011589	larp1b	89	54.365	ENSMODG00000012300	LARP1B	86	54.183	Monodelphis_domestica
ENSKMAG00000011589	larp1b	99	78.698	ENSMALG00000003638	larp1b	99	78.107	Monopterus_albus
ENSKMAG00000011589	larp1b	86	56.742	ENSMPUG00000017365	LARP1B	83	54.527	Mustela_putorius_furo
ENSKMAG00000011589	larp1b	86	54.555	ENSMLUG00000010229	LARP1B	99	53.723	Myotis_lucifugus
ENSKMAG00000011589	larp1b	92	70.860	ENSNBRG00000023846	larp1b	99	72.657	Neolamprologus_brichardi
ENSKMAG00000011589	larp1b	84	54.496	ENSNLEG00000013819	LARP1B	96	53.560	Nomascus_leucogenys
ENSKMAG00000011589	larp1b	65	58.533	ENSMEUG00000010308	LARP1B	73	58.647	Notamacropus_eugenii
ENSKMAG00000011589	larp1b	79	51.707	ENSOPRG00000005478	LARP1B	92	49.710	Ochotona_princeps
ENSKMAG00000011589	larp1b	90	76.380	ENSONIG00000012386	larp1b	99	77.066	Oreochromis_niloticus
ENSKMAG00000011589	larp1b	86	54.104	ENSOCUG00000013330	LARP1B	94	53.718	Oryctolagus_cuniculus
ENSKMAG00000011589	larp1b	95	77.646	ENSORLG00000017954	larp1b	99	72.621	Oryzias_latipes
ENSKMAG00000011589	larp1b	99	71.202	ENSORLG00020013081	larp1b	99	71.507	Oryzias_latipes_hni
ENSKMAG00000011589	larp1b	95	77.154	ENSORLG00015009580	larp1b	99	72.585	Oryzias_latipes_hsok
ENSKMAG00000011589	larp1b	99	75.374	ENSOMEG00000004210	larp1b	99	75.317	Oryzias_melastigma
ENSKMAG00000011589	larp1b	85	55.996	ENSOGAG00000005771	LARP1B	100	55.996	Otolemur_garnettii
ENSKMAG00000011589	larp1b	84	56.100	ENSOARG00000015300	LARP1B	96	54.923	Ovis_aries
ENSKMAG00000011589	larp1b	84	55.098	ENSPPAG00000030439	LARP1B	96	54.167	Pan_paniscus
ENSKMAG00000011589	larp1b	50	50.279	ENSPPRG00000002743	-	97	47.761	Panthera_pardus
ENSKMAG00000011589	larp1b	50	50.279	ENSPTIG00000011225	LARP1B	97	47.761	Panthera_tigris_altaica
ENSKMAG00000011589	larp1b	84	55.098	ENSPTRG00000016437	LARP1B	96	54.167	Pan_troglodytes
ENSKMAG00000011589	larp1b	84	55.616	ENSPANG00000012488	LARP1B	96	54.885	Papio_anubis
ENSKMAG00000011589	larp1b	91	55.157	ENSPKIG00000014360	larp1b	96	55.483	Paramormyrops_kingsleyae
ENSKMAG00000011589	larp1b	89	56.122	ENSPSIG00000012885	LARP1B	99	54.555	Pelodiscus_sinensis
ENSKMAG00000011589	larp1b	77	75.817	ENSPMGG00000007207	larp1b	92	75.294	Periophthalmus_magnuspinnatus
ENSKMAG00000011589	larp1b	66	54.741	ENSPMAG00000002700	larp1b	98	50.951	Petromyzon_marinus
ENSKMAG00000011589	larp1b	83	56.517	ENSPCIG00000026516	LARP1B	92	63.158	Phascolarctos_cinereus
ENSKMAG00000011589	larp1b	99	77.037	ENSPFOG00000019519	larp1b	96	78.889	Poecilia_formosa
ENSKMAG00000011589	larp1b	61	75.703	ENSPFOG00000022837	-	94	79.028	Poecilia_formosa
ENSKMAG00000011589	larp1b	99	75.322	ENSPLAG00000007115	larp1b	99	76.427	Poecilia_latipinna
ENSKMAG00000011589	larp1b	99	80.127	ENSPMEG00000001224	larp1b	96	81.656	Poecilia_mexicana
ENSKMAG00000011589	larp1b	85	53.583	ENSPCAG00000007546	LARP1B	95	52.805	Procavia_capensis
ENSKMAG00000011589	larp1b	74	70.796	ENSPCOG00000021874	LARP1B	94	71.560	Propithecus_coquereli
ENSKMAG00000011589	larp1b	86	52.258	ENSPVAG00000005373	LARP1B	96	52.772	Pteropus_vampyrus
ENSKMAG00000011589	larp1b	74	78.486	ENSPNYG00000017357	larp1b	95	78.486	Pundamilia_nyererei
ENSKMAG00000011589	larp1b	88	64.403	ENSPNAG00000008823	larp1b	88	61.638	Pygocentrus_nattereri
ENSKMAG00000011589	larp1b	50	49.536	ENSRBIG00000039982	-	97	47.407	Rhinopithecus_bieti
ENSKMAG00000011589	larp1b	84	55.507	ENSRROG00000030771	LARP1B	96	54.885	Rhinopithecus_roxellana
ENSKMAG00000011589	larp1b	63	50.568	ENSSHAG00000014474	LARP1B	99	50.646	Sarcophilus_harrisii
ENSKMAG00000011589	larp1b	87	80.000	ENSSMAG00000006347	larp1b	97	79.479	Scophthalmus_maximus
ENSKMAG00000011589	larp1b	96	81.084	ENSSDUG00000004182	larp1b	97	78.989	Seriola_dumerili
ENSKMAG00000011589	larp1b	96	73.251	ENSSLDG00000014613	larp1b	95	78.426	Seriola_lalandi_dorsalis
ENSKMAG00000011589	larp1b	80	56.398	ENSSPUG00000011837	LARP1B	92	56.780	Sphenodon_punctatus
ENSKMAG00000011589	larp1b	97	77.788	ENSSPAG00000017772	larp1b	99	76.853	Stegastes_partitus
ENSKMAG00000011589	larp1b	92	53.838	ENSSSCG00000034280	LARP1B	98	75.000	Sus_scrofa
ENSKMAG00000011589	larp1b	72	60.870	ENSTGUG00000002098	-	79	63.704	Taeniopygia_guttata
ENSKMAG00000011589	larp1b	100	72.157	ENSTRUG00000005612	larp1b	99	71.737	Takifugu_rubripes
ENSKMAG00000011589	larp1b	92	74.836	ENSTNIG00000012398	larp1b	98	75.685	Tetraodon_nigroviridis
ENSKMAG00000011589	larp1b	65	51.429	ENSTBEG00000004177	LARP1B	72	51.598	Tupaia_belangeri
ENSKMAG00000011589	larp1b	76	57.541	ENSTTRG00000012984	LARP1B	88	55.030	Tursiops_truncatus
ENSKMAG00000011589	larp1b	85	56.659	ENSUMAG00000007373	LARP1B	94	55.494	Ursus_maritimus
ENSKMAG00000011589	larp1b	68	56.410	ENSVPAG00000007223	LARP1B	69	75.658	Vicugna_pacos
ENSKMAG00000011589	larp1b	85	57.143	ENSVVUG00000011307	LARP1B	99	54.788	Vulpes_vulpes
ENSKMAG00000011589	larp1b	93	50.050	ENSXETG00000022512	larp1b	93	50.309	Xenopus_tropicalis
ENSKMAG00000011589	larp1b	88	72.351	ENSXCOG00000004435	larp1b	94	71.705	Xiphophorus_couchianus
ENSKMAG00000011589	larp1b	100	79.822	ENSXMAG00000008150	larp1b	96	81.472	Xiphophorus_maculatus