EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000011627 (Gene tree)
Gene ID: 108240142
Gene Symbol: parp1
Alias: si:dkey-206f10.3|wu:fc60f12|zgc:110092
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 14023 bases
Position: chrLWHD01000071.1:1798035-1812057
Accession: 108240142
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000015581	PARP	PF00644.20	1e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000015806	-	4104	XM_017423361	ENSKMAP00000015581	1015 (aa)	XP_017278850	UPI0007F88F8C

Gene Model

Click here to download ENSKMAG00000011627's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03410	Base excision repair	KEGG
kmr04210	Apoptosis	KEGG
kmr04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000011627's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000011627	parp1	51	42.724	ENSKMAG00000017955	parp2	99	42.075

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000011627	parp1	100	70.996	ENSG00000143799	PARP1	100	71.024	Homo_sapiens
ENSKMAG00000011627	parp1	100	90.739	ENSAPOG00000006414	parp1	100	90.739	Acanthochromis_polyacanthus
ENSKMAG00000011627	parp1	99	69.332	ENSAMEG00000014451	PARP1	100	69.332	Ailuropoda_melanoleuca
ENSKMAG00000011627	parp1	100	90.345	ENSACIG00000005651	parp1	100	90.345	Amphilophus_citrinellus
ENSKMAG00000011627	parp1	100	92.020	ENSAOCG00000021005	parp1	100	91.823	Amphiprion_ocellaris
ENSKMAG00000011627	parp1	100	91.921	ENSAPEG00000004784	parp1	100	91.724	Amphiprion_percula
ENSKMAG00000011627	parp1	100	90.049	ENSATEG00000010457	parp1	100	89.951	Anabas_testudineus
ENSKMAG00000011627	parp1	87	73.613	ENSAPLG00000014039	PARP1	99	73.499	Anas_platyrhynchos
ENSKMAG00000011627	parp1	100	71.526	ENSACAG00000006189	PARP1	100	71.624	Anolis_carolinensis
ENSKMAG00000011627	parp1	100	71.191	ENSANAG00000032699	PARP1	100	71.122	Aotus_nancymaae
ENSKMAG00000011627	parp1	100	90.148	ENSACLG00000015489	parp1	100	90.148	Astatotilapia_calliptera
ENSKMAG00000011627	parp1	100	81.427	ENSAMXG00000006465	parp1	100	81.623	Astyanax_mexicanus
ENSKMAG00000011627	parp1	100	68.426	ENSBTAG00000000837	PARP1	100	68.426	Bos_taurus
ENSKMAG00000011627	parp1	86	43.371	WBGene00004049	parp-1	100	45.420	Caenorhabditis_elegans
ENSKMAG00000011627	parp1	100	70.703	ENSCJAG00000012831	PARP1	100	70.634	Callithrix_jacchus
ENSKMAG00000011627	parp1	99	68.846	ENSCAFG00000016089	PARP1	100	69.050	Canis_familiaris
ENSKMAG00000011627	parp1	100	69.765	ENSCAFG00020001660	PARP1	100	69.961	Canis_lupus_dingo
ENSKMAG00000011627	parp1	100	68.426	ENSCHIG00000018072	PARP1	100	68.622	Capra_hircus
ENSKMAG00000011627	parp1	99	71.320	ENSTSYG00000003699	PARP1	99	71.569	Carlito_syrichta
ENSKMAG00000011627	parp1	99	58.985	ENSCAPG00000011113	-	99	58.932	Cavia_aperea
ENSKMAG00000011627	parp1	100	70.772	ENSCPOG00000015643	-	100	70.703	Cavia_porcellus
ENSKMAG00000011627	parp1	100	71.191	ENSCCAG00000033484	PARP1	100	71.122	Cebus_capucinus
ENSKMAG00000011627	parp1	100	70.703	ENSCATG00000038981	PARP1	100	70.732	Cercocebus_atys
ENSKMAG00000011627	parp1	99	70.501	ENSCLAG00000006637	PARP1	99	70.432	Chinchilla_lanigera
ENSKMAG00000011627	parp1	66	76.562	ENSCHOG00000003539	PARP1	66	76.562	Choloepus_hoffmanni
ENSKMAG00000011627	parp1	99	73.445	ENSCPBG00000011958	PARP1	99	73.445	Chrysemys_picta_bellii
ENSKMAG00000011627	parp1	99	70.092	ENSCANG00000041340	PARP1	100	70.122	Colobus_angolensis_palliatus
ENSKMAG00000011627	parp1	99	70.345	ENSCGRG00001020559	Parp1	99	70.443	Cricetulus_griseus_chok1gshd
ENSKMAG00000011627	parp1	99	69.796	ENSCGRG00000004864	Parp1	100	69.898	Cricetulus_griseus_crigri
ENSKMAG00000011627	parp1	100	91.767	ENSCSEG00000020665	parp1	100	91.767	Cynoglossus_semilaevis
ENSKMAG00000011627	parp1	99	90.389	ENSCVAG00000021372	parp1	99	90.389	Cyprinodon_variegatus
ENSKMAG00000011627	parp1	100	82.711	ENSDARG00000019529	parp1	100	82.515	Danio_rerio
ENSKMAG00000011627	parp1	99	69.121	ENSDNOG00000012059	PARP1	100	69.325	Dasypus_novemcinctus
ENSKMAG00000011627	parp1	99	68.571	ENSDORG00000005234	Parp1	100	68.980	Dipodomys_ordii
ENSKMAG00000011627	parp1	99	40.972	FBgn0010247	Parp	99	40.972	Drosophila_melanogaster
ENSKMAG00000011627	parp1	87	77.344	ENSETEG00000013254	PARP1	88	77.344	Echinops_telfairi
ENSKMAG00000011627	parp1	99	59.077	ENSEBUG00000005820	parp1	100	59.077	Eptatretus_burgeri
ENSKMAG00000011627	parp1	98	69.881	ENSEASG00005013275	PARP1	99	70.506	Equus_asinus_asinus
ENSKMAG00000011627	parp1	100	69.795	ENSECAG00000019207	PARP1	100	70.312	Equus_caballus
ENSKMAG00000011627	parp1	99	68.043	ENSEEUG00000012253	PARP1	99	68.043	Erinaceus_europaeus
ENSKMAG00000011627	parp1	99	83.090	ENSELUG00000017336	parp1	100	82.382	Esox_lucius
ENSKMAG00000011627	parp1	99	69.130	ENSFCAG00000005777	PARP1	100	69.636	Felis_catus
ENSKMAG00000011627	parp1	99	73.517	ENSFALG00000011578	PARP1	100	73.517	Ficedula_albicollis
ENSKMAG00000011627	parp1	99	69.348	ENSFDAG00000017662	PARP1	100	69.379	Fukomys_damarensis
ENSKMAG00000011627	parp1	100	89.754	ENSFHEG00000001117	parp1	100	89.754	Fundulus_heteroclitus
ENSKMAG00000011627	parp1	99	82.255	ENSGMOG00000014929	parp1	100	82.157	Gadus_morhua
ENSKMAG00000011627	parp1	99	74.334	ENSGALG00000009228	PARP1	99	74.334	Gallus_gallus
ENSKMAG00000011627	parp1	100	90.443	ENSGAFG00000010450	parp1	100	90.443	Gambusia_affinis
ENSKMAG00000011627	parp1	100	88.496	ENSGACG00000011280	parp1	100	88.299	Gasterosteus_aculeatus
ENSKMAG00000011627	parp1	99	72.952	ENSGAGG00000010066	PARP1	99	72.359	Gopherus_agassizii
ENSKMAG00000011627	parp1	100	70.801	ENSGGOG00000006308	PARP1	100	70.927	Gorilla_gorilla
ENSKMAG00000011627	parp1	100	91.034	ENSHBUG00000010490	parp1	100	90.837	Haplochromis_burtoni
ENSKMAG00000011627	parp1	96	69.817	ENSHGLG00000003992	PARP1	93	69.817	Heterocephalus_glaber_female
ENSKMAG00000011627	parp1	96	69.817	ENSHGLG00100016965	PARP1	93	69.817	Heterocephalus_glaber_male
ENSKMAG00000011627	parp1	100	85.294	ENSHCOG00000011619	parp1	100	85.882	Hippocampus_comes
ENSKMAG00000011627	parp1	100	81.171	ENSIPUG00000020250	parp1	100	81.463	Ictalurus_punctatus
ENSKMAG00000011627	parp1	100	70.674	ENSSTOG00000016000	PARP1	100	70.605	Ictidomys_tridecemlineatus
ENSKMAG00000011627	parp1	100	69.638	ENSJJAG00000023497	Parp1	100	70.254	Jaculus_jaculus
ENSKMAG00000011627	parp1	100	90.640	ENSLBEG00000013376	parp1	100	90.443	Labrus_bergylta
ENSKMAG00000011627	parp1	99	57.115	ENSLACG00000002735	PARP1	99	56.974	Latimeria_chalumnae
ENSKMAG00000011627	parp1	100	80.138	ENSLOCG00000015798	parp1	100	80.373	Lepisosteus_oculatus
ENSKMAG00000011627	parp1	99	69.043	ENSLAFG00000007830	PARP1	100	68.973	Loxodonta_africana
ENSKMAG00000011627	parp1	100	70.703	ENSMFAG00000002526	PARP1	100	70.634	Macaca_fascicularis
ENSKMAG00000011627	parp1	100	70.801	ENSMMUG00000021820	PARP1	100	70.732	Macaca_mulatta
ENSKMAG00000011627	parp1	100	70.703	ENSMNEG00000034074	PARP1	100	70.732	Macaca_nemestrina
ENSKMAG00000011627	parp1	100	69.036	ENSMLEG00000012344	PARP1	100	68.969	Mandrillus_leucophaeus
ENSKMAG00000011627	parp1	100	90.443	ENSMAMG00000020652	parp1	100	90.246	Mastacembelus_armatus
ENSKMAG00000011627	parp1	100	91.133	ENSMZEG00005016907	parp1	100	90.936	Maylandia_zebra
ENSKMAG00000011627	parp1	99	73.490	ENSMGAG00000007760	PARP1	100	73.490	Meleagris_gallopavo
ENSKMAG00000011627	parp1	99	70.345	ENSMAUG00000008306	Parp1	99	70.345	Mesocricetus_auratus
ENSKMAG00000011627	parp1	100	67.840	ENSMICG00000017076	PARP1	100	67.742	Microcebus_murinus
ENSKMAG00000011627	parp1	99	69.951	ENSMOCG00000014315	Parp1	99	70.049	Microtus_ochrogaster
ENSKMAG00000011627	parp1	100	88.627	ENSMMOG00000015966	parp1	100	88.529	Mola_mola
ENSKMAG00000011627	parp1	100	70.490	ENSMODG00000006076	PARP1	100	70.196	Monodelphis_domestica
ENSKMAG00000011627	parp1	100	86.404	ENSMALG00000004057	parp1	100	86.305	Monopterus_albus
ENSKMAG00000011627	parp1	100	69.961	MGP_CAROLIEiJ_G0014978	Parp1	100	76.531	Mus_caroli
ENSKMAG00000011627	parp1	99	70.276	ENSMUSG00000026496	Parp1	99	76.531	Mus_musculus
ENSKMAG00000011627	parp1	99	70.276	MGP_SPRETEiJ_G0015777	Parp1	100	76.531	Mus_spretus
ENSKMAG00000011627	parp1	100	70.059	ENSMPUG00000004585	PARP1	100	69.961	Mustela_putorius_furo
ENSKMAG00000011627	parp1	90	59.609	ENSMLUG00000012285	PARP1	100	59.718	Myotis_lucifugus
ENSKMAG00000011627	parp1	99	69.655	ENSNGAG00000003885	Parp1	99	69.852	Nannospalax_galili
ENSKMAG00000011627	parp1	100	89.754	ENSNBRG00000017434	parp1	100	89.754	Neolamprologus_brichardi
ENSKMAG00000011627	parp1	96	74.876	ENSNLEG00000013905	PARP1	100	74.876	Nomascus_leucogenys
ENSKMAG00000011627	parp1	67	78.507	ENSMEUG00000007720	PARP1	87	78.507	Notamacropus_eugenii
ENSKMAG00000011627	parp1	100	71.875	ENSOPRG00000011722	PARP1	100	71.902	Ochotona_princeps
ENSKMAG00000011627	parp1	100	69.404	ENSODEG00000007424	PARP1	100	69.238	Octodon_degus
ENSKMAG00000011627	parp1	100	90.640	ENSONIG00000013486	parp1	100	90.443	Oreochromis_niloticus
ENSKMAG00000011627	parp1	99	72.114	ENSOANG00000001488	PARP1	100	72.217	Ornithorhynchus_anatinus
ENSKMAG00000011627	parp1	100	71.094	ENSOCUG00000017820	PARP1	100	71.317	Oryctolagus_cuniculus
ENSKMAG00000011627	parp1	100	88.473	ENSORLG00000013691	parp1	100	88.473	Oryzias_latipes
ENSKMAG00000011627	parp1	99	87.984	ENSORLG00020001074	parp1	99	87.984	Oryzias_latipes_hni
ENSKMAG00000011627	parp1	100	88.473	ENSORLG00015007090	parp1	100	88.473	Oryzias_latipes_hsok
ENSKMAG00000011627	parp1	100	70.381	ENSOGAG00000016206	PARP1	100	70.283	Otolemur_garnettii
ENSKMAG00000011627	parp1	100	68.622	ENSOARG00000000811	PARP1	100	69.013	Ovis_aries
ENSKMAG00000011627	parp1	100	70.605	ENSPPAG00000040862	PARP1	100	70.634	Pan_paniscus
ENSKMAG00000011627	parp1	96	68.737	ENSPPRG00000003528	PARP1	100	69.145	Panthera_pardus
ENSKMAG00000011627	parp1	93	58.220	ENSPTIG00000009102	PARP1	98	57.878	Panthera_tigris_altaica
ENSKMAG00000011627	parp1	100	70.605	ENSPTRG00000002049	PARP1	100	70.634	Pan_troglodytes
ENSKMAG00000011627	parp1	100	70.829	ENSPANG00000011198	PARP1	100	70.760	Papio_anubis
ENSKMAG00000011627	parp1	100	80.433	ENSPKIG00000006039	parp1	100	80.433	Paramormyrops_kingsleyae
ENSKMAG00000011627	parp1	99	71.662	ENSPSIG00000016374	PARP1	100	71.662	Pelodiscus_sinensis
ENSKMAG00000011627	parp1	100	83.121	ENSPMGG00000008936	parp1	100	82.924	Periophthalmus_magnuspinnatus
ENSKMAG00000011627	parp1	100	70.283	ENSPEMG00000020230	Parp1	99	70.501	Peromyscus_maniculatus_bairdii
ENSKMAG00000011627	parp1	99	70.640	ENSPCIG00000006436	PARP1	99	70.640	Phascolarctos_cinereus
ENSKMAG00000011627	parp1	100	88.241	ENSPFOG00000002342	parp1	100	88.966	Poecilia_formosa
ENSKMAG00000011627	parp1	100	90.542	ENSPLAG00000000909	parp1	100	90.542	Poecilia_latipinna
ENSKMAG00000011627	parp1	100	90.837	ENSPMEG00000013979	parp1	100	90.837	Poecilia_mexicana
ENSKMAG00000011627	parp1	100	90.542	ENSPREG00000001114	parp1	100	90.542	Poecilia_reticulata
ENSKMAG00000011627	parp1	99	70.031	ENSPPYG00000000164	PARP1	100	70.031	Pongo_abelii
ENSKMAG00000011627	parp1	60	78.395	ENSPCAG00000005558	-	59	78.395	Procavia_capensis
ENSKMAG00000011627	parp1	100	70.744	ENSPCOG00000016918	PARP1	100	70.939	Propithecus_coquereli
ENSKMAG00000011627	parp1	92	77.358	ENSPVAG00000005543	PARP1	86	85.366	Pteropus_vampyrus
ENSKMAG00000011627	parp1	100	90.148	ENSPNYG00000009702	parp1	100	90.148	Pundamilia_nyererei
ENSKMAG00000011627	parp1	100	81.818	ENSPNAG00000002787	parp1	100	83.089	Pygocentrus_nattereri
ENSKMAG00000011627	parp1	99	70.276	ENSRNOG00000003084	Parp1	99	70.276	Rattus_norvegicus
ENSKMAG00000011627	parp1	100	70.898	ENSRBIG00000044893	PARP1	99	72.356	Rhinopithecus_bieti
ENSKMAG00000011627	parp1	99	52.264	ENSRROG00000040615	-	97	59.221	Rhinopithecus_roxellana
ENSKMAG00000011627	parp1	100	70.898	ENSRROG00000029280	PARP1	99	72.356	Rhinopithecus_roxellana
ENSKMAG00000011627	parp1	100	71.387	ENSSBOG00000010144	PARP1	100	71.415	Saimiri_boliviensis_boliviensis
ENSKMAG00000011627	parp1	99	70.450	ENSSHAG00000001991	PARP1	100	70.245	Sarcophilus_harrisii
ENSKMAG00000011627	parp1	100	80.845	ENSSFOG00015020017	parp1	100	80.747	Scleropages_formosus
ENSKMAG00000011627	parp1	100	89.261	ENSSMAG00000013799	parp1	100	89.064	Scophthalmus_maximus
ENSKMAG00000011627	parp1	100	91.034	ENSSDUG00000016626	parp1	100	90.837	Seriola_dumerili
ENSKMAG00000011627	parp1	100	91.034	ENSSLDG00000006384	parp1	100	90.837	Seriola_lalandi_dorsalis
ENSKMAG00000011627	parp1	53	77.083	ENSSARG00000009436	-	58	78.788	Sorex_araneus
ENSKMAG00000011627	parp1	100	68.762	ENSSPUG00000007790	PARP1	100	68.762	Sphenodon_punctatus
ENSKMAG00000011627	parp1	100	88.473	ENSSPAG00000019074	parp1	100	90.968	Stegastes_partitus
ENSKMAG00000011627	parp1	100	70.186	ENSSSCG00000023660	PARP1	100	70.508	Sus_scrofa
ENSKMAG00000011627	parp1	97	72.979	ENSTGUG00000004260	-	100	72.979	Taeniopygia_guttata
ENSKMAG00000011627	parp1	100	86.305	ENSTRUG00000014490	parp1	100	86.305	Takifugu_rubripes
ENSKMAG00000011627	parp1	100	86.119	ENSTNIG00000016384	parp1	100	86.119	Tetraodon_nigroviridis
ENSKMAG00000011627	parp1	81	78.138	ENSTBEG00000002364	PARP1	91	78.138	Tupaia_belangeri
ENSKMAG00000011627	parp1	100	64.941	ENSTTRG00000000188	PARP1	100	65.463	Tursiops_truncatus
ENSKMAG00000011627	parp1	99	69.552	ENSUAMG00000014388	PARP1	100	69.450	Ursus_americanus
ENSKMAG00000011627	parp1	96	62.652	ENSUMAG00000014555	PARP1	99	62.753	Ursus_maritimus
ENSKMAG00000011627	parp1	83	78.431	ENSVPAG00000011411	PARP1	83	78.431	Vicugna_pacos
ENSKMAG00000011627	parp1	99	68.846	ENSVVUG00000001655	PARP1	100	69.050	Vulpes_vulpes
ENSKMAG00000011627	parp1	98	71.129	ENSXETG00000022610	parp1	99	71.329	Xenopus_tropicalis
ENSKMAG00000011627	parp1	100	90.345	ENSXMAG00000003632	parp1	100	90.345	Xiphophorus_maculatus