EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000011694 (Gene tree)
Gene ID: 108244152
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 20483 bases
Position: chrLWHD01000133.1:853126-873608
Accession: 108244152
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000015615	RNase_Zc3h12a	PF11977.8	7.8e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000015840	-	7383	XM_017430074	ENSKMAP00000015615	915 (aa)	XP_017285563	UPI0007F8A4B9

Gene Model

Click here to download ENSKMAG00000011694's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000011694's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000011694	-	79	80.423	ENSAPOG00000015355	-	82	79.762	Acanthochromis_polyacanthus
ENSKMAG00000011694	-	76	58.904	ENSAPOG00000001632	-	91	64.706	Acanthochromis_polyacanthus
ENSKMAG00000011694	-	93	75.032	ENSACIG00000001362	-	97	69.556	Amphilophus_citrinellus
ENSKMAG00000011694	-	99	79.378	ENSAOCG00000003866	-	99	86.245	Amphiprion_ocellaris
ENSKMAG00000011694	-	100	73.173	ENSAPEG00000005727	-	99	82.896	Amphiprion_percula
ENSKMAG00000011694	-	73	76.556	ENSAPEG00000018582	-	99	76.122	Amphiprion_percula
ENSKMAG00000011694	-	99	43.426	ENSATEG00000002260	-	89	74.902	Anabas_testudineus
ENSKMAG00000011694	-	100	79.051	ENSATEG00000004134	-	100	78.675	Anabas_testudineus
ENSKMAG00000011694	-	100	75.897	ENSACLG00000027924	-	100	76.078	Astatotilapia_calliptera
ENSKMAG00000011694	-	63	53.387	ENSACLG00000018493	-	99	44.842	Astatotilapia_calliptera
ENSKMAG00000011694	-	86	73.670	ENSCSEG00000010073	-	96	80.496	Cynoglossus_semilaevis
ENSKMAG00000011694	-	52	58.517	ENSCSEG00000008542	-	67	52.006	Cynoglossus_semilaevis
ENSKMAG00000011694	-	100	76.614	ENSCVAG00000002328	-	100	77.225	Cyprinodon_variegatus
ENSKMAG00000011694	-	85	57.644	ENSELUG00000009319	-	95	57.232	Esox_lucius
ENSKMAG00000011694	-	100	46.817	ENSELUG00000005470	-	100	47.897	Esox_lucius
ENSKMAG00000011694	-	92	89.796	ENSFHEG00000021225	-	100	89.796	Fundulus_heteroclitus
ENSKMAG00000011694	-	73	47.128	ENSGMOG00000017975	-	100	46.843	Gadus_morhua
ENSKMAG00000011694	-	100	77.542	ENSGAFG00000005290	-	100	76.801	Gambusia_affinis
ENSKMAG00000011694	-	73	46.043	ENSGACG00000001339	-	99	45.652	Gasterosteus_aculeatus
ENSKMAG00000011694	-	73	70.839	ENSGACG00000014201	-	100	70.839	Gasterosteus_aculeatus
ENSKMAG00000011694	-	100	75.692	ENSHBUG00000006831	-	100	75.873	Haplochromis_burtoni
ENSKMAG00000011694	-	100	61.910	ENSHCOG00000008878	-	100	61.910	Hippocampus_comes
ENSKMAG00000011694	-	97	76.598	ENSLBEG00000012554	-	99	80.429	Labrus_bergylta
ENSKMAG00000011694	-	99	43.844	ENSLBEG00000012710	-	66	54.080	Labrus_bergylta
ENSKMAG00000011694	-	100	76.422	ENSLBEG00000003547	-	100	76.275	Labrus_bergylta
ENSKMAG00000011694	-	89	47.963	ENSMAMG00000020372	-	99	44.615	Mastacembelus_armatus
ENSKMAG00000011694	-	97	72.766	ENSMAMG00000021794	-	94	88.889	Mastacembelus_armatus
ENSKMAG00000011694	-	100	75.897	ENSMZEG00005007718	-	100	76.078	Maylandia_zebra
ENSKMAG00000011694	-	63	53.387	ENSMZEG00005019137	-	90	67.097	Maylandia_zebra
ENSKMAG00000011694	-	94	74.215	ENSMMOG00000005728	-	99	79.084	Mola_mola
ENSKMAG00000011694	-	99	45.426	ENSMMOG00000019526	-	93	43.878	Mola_mola
ENSKMAG00000011694	-	100	75.364	ENSMALG00000010501	-	100	75.572	Monopterus_albus
ENSKMAG00000011694	-	51	52.594	MGP_CAROLIEiJ_G0026462	Zc3h12a	79	52.594	Mus_caroli
ENSKMAG00000011694	-	100	75.590	ENSNBRG00000006978	-	100	75.873	Neolamprologus_brichardi
ENSKMAG00000011694	-	63	51.535	ENSNBRG00000012175	-	90	67.097	Neolamprologus_brichardi
ENSKMAG00000011694	-	100	76.049	ENSONIG00000012268	-	100	76.332	Oreochromis_niloticus
ENSKMAG00000011694	-	86	77.778	ENSORLG00000029243	-	99	88.636	Oryzias_latipes
ENSKMAG00000011694	-	100	74.495	ENSORLG00020017005	-	100	75.080	Oryzias_latipes_hni
ENSKMAG00000011694	-	100	73.651	ENSORLG00015015211	-	100	75.080	Oryzias_latipes_hsok
ENSKMAG00000011694	-	100	73.523	ENSOMEG00000006666	-	100	74.603	Oryzias_melastigma
ENSKMAG00000011694	-	61	77.287	ENSPMGG00000009790	-	90	77.603	Periophthalmus_magnuspinnatus
ENSKMAG00000011694	-	55	59.227	ENSPMGG00000020126	-	55	60.659	Periophthalmus_magnuspinnatus
ENSKMAG00000011694	-	100	78.496	ENSPLAG00000009867	-	100	78.072	Poecilia_latipinna
ENSKMAG00000011694	-	100	78.708	ENSPMEG00000006624	-	100	78.284	Poecilia_mexicana
ENSKMAG00000011694	-	99	44.387	ENSPMEG00000011676	-	66	53.783	Poecilia_mexicana
ENSKMAG00000011694	-	100	78.602	ENSPREG00000010838	-	100	78.390	Poecilia_reticulata
ENSKMAG00000011694	-	98	43.560	ENSPREG00000001607	-	73	77.632	Poecilia_reticulata
ENSKMAG00000011694	-	100	76.915	ENSSMAG00000007545	-	100	75.439	Scophthalmus_maximus
ENSKMAG00000011694	-	99	45.624	ENSSMAG00000007258	-	99	45.329	Scophthalmus_maximus
ENSKMAG00000011694	-	99	45.491	ENSSDUG00000013237	-	90	65.132	Seriola_dumerili
ENSKMAG00000011694	-	100	78.096	ENSSDUG00000021864	-	100	77.073	Seriola_dumerili
ENSKMAG00000011694	-	99	47.315	ENSSLDG00000004886	-	99	47.518	Seriola_lalandi_dorsalis
ENSKMAG00000011694	-	100	78.403	ENSSLDG00000012268	-	100	77.175	Seriola_lalandi_dorsalis
ENSKMAG00000011694	-	100	78.381	ENSSPAG00000009485	-	100	78.608	Stegastes_partitus
ENSKMAG00000011694	-	99	46.334	ENSSPAG00000001850	-	99	46.878	Stegastes_partitus
ENSKMAG00000011694	-	99	73.235	ENSTRUG00000022519	-	99	73.551	Takifugu_rubripes
ENSKMAG00000011694	-	74	68.777	ENSTNIG00000014519	-	97	87.805	Tetraodon_nigroviridis
ENSKMAG00000011694	-	99	45.104	ENSXMAG00000014715	-	86	76.349	Xiphophorus_maculatus
ENSKMAG00000011694	-	100	77.754	ENSXMAG00000027171	-	100	77.648	Xiphophorus_maculatus