EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000011809 (Gene tree)
Gene ID: 108230061
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 12797 bases
Position: chrLWHD01000001.1:11640625-11653421
Accession: 108230061
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000015819	TRM	PF02005.16	1.8e-138	1	1
ENSKMAP00000015835	TRM	PF02005.16	2.8e-138	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000016063	-	2125	XM_017405921	ENSKMAP00000015835	658 (aa)	XP_017261410	UPI0007F895FB
ENSKMAT00000016047	-	1773	-	ENSKMAP00000015819	590 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000011809's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000011809's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000011809	trmt1	95	67.776	ENSG00000104907	TRMT1	100	76.440	Homo_sapiens
ENSKMAG00000011809	trmt1	98	64.805	ENSAMEG00000012598	TRMT1	88	64.805	Ailuropoda_melanoleuca
ENSKMAG00000011809	trmt1	99	77.816	ENSACIG00000018680	trmt1	97	78.444	Amphilophus_citrinellus
ENSKMAG00000011809	trmt1	99	85.666	ENSAOCG00000006781	trmt1	99	84.091	Amphiprion_ocellaris
ENSKMAG00000011809	trmt1	99	85.836	ENSAPEG00000007712	trmt1	99	84.394	Amphiprion_percula
ENSKMAG00000011809	trmt1	99	83.305	ENSATEG00000001872	trmt1	99	81.287	Anabas_testudineus
ENSKMAG00000011809	trmt1	96	67.474	ENSACAG00000003825	TRMT1	94	67.820	Anolis_carolinensis
ENSKMAG00000011809	trmt1	95	65.849	ENSANAG00000023016	TRMT1	92	66.725	Aotus_nancymaae
ENSKMAG00000011809	trmt1	98	82.192	ENSACLG00000010073	trmt1	98	83.389	Astatotilapia_calliptera
ENSKMAG00000011809	trmt1	96	78.819	ENSAMXG00000012026	trmt1	93	75.758	Astyanax_mexicanus
ENSKMAG00000011809	trmt1	98	64.924	ENSBTAG00000019325	TRMT1	84	64.924	Bos_taurus
ENSKMAG00000011809	trmt1	86	41.040	WBGene00006613	trm-1	96	40.185	Caenorhabditis_elegans
ENSKMAG00000011809	trmt1	95	64.572	ENSCJAG00000004566	TRMT1	88	65.445	Callithrix_jacchus
ENSKMAG00000011809	trmt1	98	65.313	ENSCAFG00000017070	TRMT1	90	67.776	Canis_familiaris
ENSKMAG00000011809	trmt1	98	65.085	ENSCAFG00020005397	TRMT1	88	67.487	Canis_lupus_dingo
ENSKMAG00000011809	trmt1	98	65.101	ENSCHIG00000013569	TRMT1	89	65.101	Capra_hircus
ENSKMAG00000011809	trmt1	95	63.923	ENSTSYG00000003207	TRMT1	87	65.734	Carlito_syrichta
ENSKMAG00000011809	trmt1	88	63.327	ENSCAPG00000003355	TRMT1	94	64.272	Cavia_aperea
ENSKMAG00000011809	trmt1	95	66.900	ENSCPOG00000011754	TRMT1	87	67.776	Cavia_porcellus
ENSKMAG00000011809	trmt1	95	65.324	ENSCCAG00000022263	TRMT1	92	65.849	Cebus_capucinus
ENSKMAG00000011809	trmt1	86	55.532	ENSCATG00000038220	-	90	56.957	Cercocebus_atys
ENSKMAG00000011809	trmt1	95	66.900	ENSCATG00000039850	TRMT1	86	68.476	Cercocebus_atys
ENSKMAG00000011809	trmt1	97	65.523	ENSCLAG00000015295	TRMT1	92	63.423	Chinchilla_lanigera
ENSKMAG00000011809	trmt1	79	68.776	ENSCSAG00000006500	TRMT1	89	70.675	Chlorocebus_sabaeus
ENSKMAG00000011809	trmt1	95	70.107	ENSCPBG00000023866	TRMT1	87	69.113	Chrysemys_picta_bellii
ENSKMAG00000011809	trmt1	92	47.662	ENSCING00000002884	-	98	48.732	Ciona_intestinalis
ENSKMAG00000011809	trmt1	90	49.442	ENSCSAVG00000010927	-	100	48.889	Ciona_savignyi
ENSKMAG00000011809	trmt1	96	52.850	ENSCANG00000040631	TRMT1	86	54.799	Colobus_angolensis_palliatus
ENSKMAG00000011809	trmt1	96	51.724	ENSCANG00000031650	-	91	51.724	Colobus_angolensis_palliatus
ENSKMAG00000011809	trmt1	97	64.346	ENSCGRG00001022594	Trmt1	90	65.646	Cricetulus_griseus_chok1gshd
ENSKMAG00000011809	trmt1	97	64.346	ENSCGRG00000017732	Trmt1	88	65.646	Cricetulus_griseus_crigri
ENSKMAG00000011809	trmt1	99	82.453	ENSCSEG00000001643	trmt1	94	81.369	Cynoglossus_semilaevis
ENSKMAG00000011809	trmt1	99	86.007	ENSCVAG00000011886	trmt1	99	83.511	Cyprinodon_variegatus
ENSKMAG00000011809	trmt1	98	76.047	ENSDARG00000010978	trmt1	94	74.408	Danio_rerio
ENSKMAG00000011809	trmt1	86	43.810	ENSDNOG00000048240	-	89	45.714	Dasypus_novemcinctus
ENSKMAG00000011809	trmt1	97	63.203	ENSDORG00000014298	Trmt1	89	63.203	Dipodomys_ordii
ENSKMAG00000011809	trmt1	91	47.005	FBgn0032430	CG6388	93	47.027	Drosophila_melanogaster
ENSKMAG00000011809	trmt1	86	51.976	ENSEBUG00000003449	trmt1	75	52.157	Eptatretus_burgeri
ENSKMAG00000011809	trmt1	95	65.849	ENSEASG00005004050	TRMT1	90	67.250	Equus_asinus_asinus
ENSKMAG00000011809	trmt1	95	65.849	ENSECAG00000016149	TRMT1	90	67.250	Equus_caballus
ENSKMAG00000011809	trmt1	66	57.975	ENSEEUG00000014102	-	100	57.975	Erinaceus_europaeus
ENSKMAG00000011809	trmt1	97	76.320	ENSELUG00000021659	trmt1	99	71.687	Esox_lucius
ENSKMAG00000011809	trmt1	95	65.849	ENSFCAG00000000483	TRMT1	87	66.900	Felis_catus
ENSKMAG00000011809	trmt1	97	65.470	ENSFDAG00000007386	TRMT1	89	66.723	Fukomys_damarensis
ENSKMAG00000011809	trmt1	88	86.641	ENSFHEG00000012865	trmt1	99	84.590	Fundulus_heteroclitus
ENSKMAG00000011809	trmt1	96	72.359	ENSGMOG00000006564	trmt1	99	73.814	Gadus_morhua
ENSKMAG00000011809	trmt1	98	86.106	ENSGAFG00000011862	trmt1	99	82.648	Gambusia_affinis
ENSKMAG00000011809	trmt1	96	80.245	ENSGACG00000000227	trmt1	93	81.882	Gasterosteus_aculeatus
ENSKMAG00000011809	trmt1	95	69.542	ENSGAGG00000016432	TRMT1	85	70.547	Gopherus_agassizii
ENSKMAG00000011809	trmt1	95	67.776	ENSGGOG00000014007	TRMT1	87	68.651	Gorilla_gorilla
ENSKMAG00000011809	trmt1	92	74.499	ENSHBUG00000008821	trmt1	92	77.231	Haplochromis_burtoni
ENSKMAG00000011809	trmt1	95	65.499	ENSHGLG00000015972	TRMT1	89	66.214	Heterocephalus_glaber_female
ENSKMAG00000011809	trmt1	95	61.189	ENSHGLG00100018112	TRMT1	89	62.034	Heterocephalus_glaber_male
ENSKMAG00000011809	trmt1	98	78.596	ENSHCOG00000009447	trmt1	91	80.308	Hippocampus_comes
ENSKMAG00000011809	trmt1	96	75.000	ENSIPUG00000002899	trmt1	87	75.459	Ictalurus_punctatus
ENSKMAG00000011809	trmt1	95	66.491	ENSSTOG00000012531	TRMT1	87	67.544	Ictidomys_tridecemlineatus
ENSKMAG00000011809	trmt1	97	64.615	ENSJJAG00000017154	Trmt1	89	66.099	Jaculus_jaculus
ENSKMAG00000011809	trmt1	97	83.362	ENSLBEG00000012703	trmt1	99	77.877	Labrus_bergylta
ENSKMAG00000011809	trmt1	96	61.121	ENSLACG00000014585	TRMT1	94	61.739	Latimeria_chalumnae
ENSKMAG00000011809	trmt1	96	69.718	ENSLOCG00000006479	trmt1	99	70.629	Lepisosteus_oculatus
ENSKMAG00000011809	trmt1	98	66.050	ENSLAFG00000014072	TRMT1	90	67.521	Loxodonta_africana
ENSKMAG00000011809	trmt1	95	66.900	ENSMFAG00000033143	TRMT1	86	68.476	Macaca_fascicularis
ENSKMAG00000011809	trmt1	96	61.672	ENSMMUG00000001167	TRMT1	87	63.732	Macaca_mulatta
ENSKMAG00000011809	trmt1	95	66.725	ENSMNEG00000037867	TRMT1	86	68.301	Macaca_nemestrina
ENSKMAG00000011809	trmt1	95	66.725	ENSMLEG00000016142	TRMT1	87	68.301	Mandrillus_leucophaeus
ENSKMAG00000011809	trmt1	98	85.445	ENSMAMG00000004357	trmt1	100	81.138	Mastacembelus_armatus
ENSKMAG00000011809	trmt1	98	82.705	ENSMZEG00005014510	trmt1	99	78.971	Maylandia_zebra
ENSKMAG00000011809	trmt1	98	64.020	ENSMAUG00000011134	Trmt1	87	66.202	Mesocricetus_auratus
ENSKMAG00000011809	trmt1	96	66.044	ENSMICG00000000793	TRMT1	90	66.223	Microcebus_murinus
ENSKMAG00000011809	trmt1	98	63.729	ENSMOCG00000015895	Trmt1	89	64.407	Microtus_ochrogaster
ENSKMAG00000011809	trmt1	99	81.145	ENSMMOG00000011097	trmt1	99	81.169	Mola_mola
ENSKMAG00000011809	trmt1	98	66.096	ENSMODG00000011619	TRMT1	97	66.107	Monodelphis_domestica
ENSKMAG00000011809	trmt1	98	65.417	MGP_CAROLIEiJ_G0031304	Trmt1	97	60.700	Mus_caroli
ENSKMAG00000011809	trmt1	98	65.588	ENSMUSG00000001909	Trmt1	92	63.636	Mus_musculus
ENSKMAG00000011809	trmt1	98	65.417	MGP_SPRETEiJ_G0032422	Trmt1	92	63.223	Mus_spretus
ENSKMAG00000011809	trmt1	95	66.725	ENSMPUG00000004210	TRMT1	82	67.776	Mustela_putorius_furo
ENSKMAG00000011809	trmt1	95	67.304	ENSMLUG00000012809	TRMT1	88	66.779	Myotis_lucifugus
ENSKMAG00000011809	trmt1	95	64.931	ENSNGAG00000022486	Trmt1	87	66.493	Nannospalax_galili
ENSKMAG00000011809	trmt1	84	89.118	ENSNBRG00000024376	trmt1	87	89.118	Neolamprologus_brichardi
ENSKMAG00000011809	trmt1	75	64.333	ENSNLEG00000013019	-	83	67.918	Nomascus_leucogenys
ENSKMAG00000011809	trmt1	98	66.379	ENSMEUG00000013756	TRMT1	99	67.063	Notamacropus_eugenii
ENSKMAG00000011809	trmt1	77	74.000	ENSOPRG00000009471	-	71	74.000	Ochotona_princeps
ENSKMAG00000011809	trmt1	97	65.180	ENSODEG00000010323	TRMT1	90	65.604	Octodon_degus
ENSKMAG00000011809	trmt1	98	86.301	ENSONIG00000000400	trmt1	97	85.197	Oreochromis_niloticus
ENSKMAG00000011809	trmt1	82	67.273	ENSOCUG00000021934	TRMT1	90	70.947	Oryctolagus_cuniculus
ENSKMAG00000011809	trmt1	98	79.695	ENSORLG00000020074	trmt1	97	79.675	Oryzias_latipes
ENSKMAG00000011809	trmt1	98	84.075	ENSORLG00020007561	trmt1	99	80.894	Oryzias_latipes_hni
ENSKMAG00000011809	trmt1	99	82.799	ENSORLG00015006547	trmt1	99	80.894	Oryzias_latipes_hsok
ENSKMAG00000011809	trmt1	98	84.075	ENSOMEG00000019343	trmt1	99	81.356	Oryzias_melastigma
ENSKMAG00000011809	trmt1	98	64.833	ENSOGAG00000025576	TRMT1	90	68.063	Otolemur_garnettii
ENSKMAG00000011809	trmt1	98	52.508	ENSOARG00000009397	TRMT1	83	52.676	Ovis_aries
ENSKMAG00000011809	trmt1	95	58.596	ENSPPRG00000012117	TRMT1	87	60.000	Panthera_pardus
ENSKMAG00000011809	trmt1	71	66.084	ENSPTIG00000008833	TRMT1	82	68.182	Panthera_tigris_altaica
ENSKMAG00000011809	trmt1	92	49.823	ENSPTRG00000050421	-	89	50.883	Pan_troglodytes
ENSKMAG00000011809	trmt1	95	67.776	ENSPTRG00000010557	TRMT1	87	68.651	Pan_troglodytes
ENSKMAG00000011809	trmt1	95	66.900	ENSPANG00000009247	TRMT1	87	68.476	Papio_anubis
ENSKMAG00000011809	trmt1	77	55.870	ENSPANG00000034058	-	81	56.522	Papio_anubis
ENSKMAG00000011809	trmt1	98	77.547	ENSPKIG00000005309	trmt1	99	71.535	Paramormyrops_kingsleyae
ENSKMAG00000011809	trmt1	93	58.919	ENSPSIG00000008762	TRMT1	80	59.785	Pelodiscus_sinensis
ENSKMAG00000011809	trmt1	95	82.593	ENSPMGG00000019764	trmt1	95	81.387	Periophthalmus_magnuspinnatus
ENSKMAG00000011809	trmt1	98	64.636	ENSPEMG00000016247	Trmt1	86	67.657	Peromyscus_maniculatus_bairdii
ENSKMAG00000011809	trmt1	97	63.240	ENSPMAG00000004329	trmt1	91	64.111	Petromyzon_marinus
ENSKMAG00000011809	trmt1	98	67.010	ENSPCIG00000019273	TRMT1	92	67.343	Phascolarctos_cinereus
ENSKMAG00000011809	trmt1	98	86.964	ENSPFOG00000008527	trmt1	99	83.841	Poecilia_formosa
ENSKMAG00000011809	trmt1	98	85.420	ENSPLAG00000018788	trmt1	99	83.860	Poecilia_latipinna
ENSKMAG00000011809	trmt1	98	86.792	ENSPMEG00000013120	trmt1	99	83.841	Poecilia_mexicana
ENSKMAG00000011809	trmt1	98	85.492	ENSPREG00000000211	trmt1	96	81.985	Poecilia_reticulata
ENSKMAG00000011809	trmt1	95	67.426	ENSPPYG00000009622	TRMT1	87	68.301	Pongo_abelii
ENSKMAG00000011809	trmt1	95	62.697	ENSPCAG00000003698	TRMT1	87	62.872	Procavia_capensis
ENSKMAG00000011809	trmt1	98	64.548	ENSPCOG00000008653	TRMT1	87	67.601	Propithecus_coquereli
ENSKMAG00000011809	trmt1	98	64.214	ENSPVAG00000015076	TRMT1	87	67.776	Pteropus_vampyrus
ENSKMAG00000011809	trmt1	98	80.993	ENSPNYG00000013960	trmt1	97	82.215	Pundamilia_nyererei
ENSKMAG00000011809	trmt1	84	78.416	ENSPNAG00000024859	trmt1	99	67.925	Pygocentrus_nattereri
ENSKMAG00000011809	trmt1	98	64.856	ENSRNOG00000002914	Trmt1	93	65.268	Rattus_norvegicus
ENSKMAG00000011809	trmt1	95	66.900	ENSRBIG00000038324	TRMT1	86	68.301	Rhinopithecus_bieti
ENSKMAG00000011809	trmt1	96	49.656	ENSRBIG00000037505	-	92	50.598	Rhinopithecus_bieti
ENSKMAG00000011809	trmt1	96	48.969	ENSRROG00000031847	-	91	49.828	Rhinopithecus_roxellana
ENSKMAG00000011809	trmt1	95	66.900	ENSRROG00000028599	TRMT1	86	68.301	Rhinopithecus_roxellana
ENSKMAG00000011809	trmt1	85	38.302	YDR120C	-	92	38.910	Saccharomyces_cerevisiae
ENSKMAG00000011809	trmt1	95	64.799	ENSSBOG00000028861	TRMT1	92	65.674	Saimiri_boliviensis_boliviensis
ENSKMAG00000011809	trmt1	95	68.070	ENSSHAG00000014381	TRMT1	94	68.924	Sarcophilus_harrisii
ENSKMAG00000011809	trmt1	98	77.397	ENSSFOG00015004139	trmt1	90	77.049	Scleropages_formosus
ENSKMAG00000011809	trmt1	98	84.354	ENSSMAG00000021136	trmt1	99	79.674	Scophthalmus_maximus
ENSKMAG00000011809	trmt1	98	85.616	ENSSDUG00000012740	trmt1	99	82.530	Seriola_dumerili
ENSKMAG00000011809	trmt1	98	85.616	ENSSLDG00000005971	trmt1	99	82.380	Seriola_lalandi_dorsalis
ENSKMAG00000011809	trmt1	89	64.366	ENSSARG00000005138	TRMT1	99	61.111	Sorex_araneus
ENSKMAG00000011809	trmt1	96	52.513	ENSSPUG00000001084	TRMT1	91	53.621	Sphenodon_punctatus
ENSKMAG00000011809	trmt1	99	83.220	ENSSPAG00000007153	trmt1	99	85.980	Stegastes_partitus
ENSKMAG00000011809	trmt1	98	64.597	ENSSSCG00000013744	TRMT1	90	67.776	Sus_scrofa
ENSKMAG00000011809	trmt1	94	76.708	ENSTRUG00000010700	trmt1	86	79.682	Takifugu_rubripes
ENSKMAG00000011809	trmt1	96	82.281	ENSTNIG00000018808	trmt1	100	83.247	Tetraodon_nigroviridis
ENSKMAG00000011809	trmt1	97	63.435	ENSTTRG00000006379	TRMT1	95	60.377	Tursiops_truncatus
ENSKMAG00000011809	trmt1	98	65.144	ENSUAMG00000022911	TRMT1	93	64.410	Ursus_americanus
ENSKMAG00000011809	trmt1	98	64.805	ENSUMAG00000006027	TRMT1	90	67.250	Ursus_maritimus
ENSKMAG00000011809	trmt1	98	65.482	ENSVVUG00000024177	TRMT1	89	65.482	Vulpes_vulpes
ENSKMAG00000011809	trmt1	77	68.764	ENSXETG00000033863	TRMT1	99	66.197	Xenopus_tropicalis
ENSKMAG00000011809	trmt1	98	86.278	ENSXCOG00000015733	trmt1	99	83.105	Xiphophorus_couchianus
ENSKMAG00000011809	trmt1	96	85.243	ENSXMAG00000013823	trmt1	99	89.529	Xiphophorus_maculatus