EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSKMAG00000011931 (Gene tree)
Gene ID
108236215
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Kryptolebias_marmoratus
Status
putative
Strand
Plus strand
Length
15952 bases
Position
chrLWHD01000038.1:656883-672834
Accession
108236215
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSKMAP00000016076ResIIIPF04851.151.9e-0811
ENSKMAP00000016043ResIIIPF04851.151.9e-0811
ENSKMAP00000016076BRKPF07533.165.2e-1711
ENSKMAP00000016043BRKPF07533.165.4e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSKMAT00000016273-5628XM_017416726ENSKMAP000000160431613 (aa)XP_017272215UPI0007F8A743
ENSKMAT00000016306-4767-ENSKMAP000000160761588 (aa)--
Gene Model
Click here to download ENSKMAG00000011931's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000011931's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSKMAG00000011931smarca4a9588.042ENSKMAG00000019518-9887.336
ENSKMAG00000011931smarca4a9971.130ENSKMAG00000015844-9371.598
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSKMAG00000011931smarca4a10086.544ENSG00000127616SMARCA49995.652Homo_sapiens
ENSKMAG00000011931smarca4a7992.393ENSAPOG00000003509smarca4a9989.671Acanthochromis_polyacanthus
ENSKMAG00000011931smarca4a9583.686ENSAPOG00000004542SMARCA49985.503Acanthochromis_polyacanthus
ENSKMAG00000011931smarca4a10082.401ENSAMEG00000010868SMARCA410082.048Ailuropoda_melanoleuca
ENSKMAG00000011931smarca4a9586.605ENSACIG00000003035-9786.300Amphilophus_citrinellus
ENSKMAG00000011931smarca4a9994.220ENSACIG00000021550smarca4a9894.469Amphilophus_citrinellus
ENSKMAG00000011931smarca4a8990.675ENSAOCG00000019167smarca4a10090.599Amphiprion_ocellaris
ENSKMAG00000011931smarca4a9487.716ENSAOCG00000009450-9787.127Amphiprion_ocellaris
ENSKMAG00000011931smarca4a9983.522ENSAPEG00000023108-9983.648Amphiprion_percula
ENSKMAG00000011931smarca4a8990.745ENSAPEG00000015559smarca4a10090.669Amphiprion_percula
ENSKMAG00000011931smarca4a9984.498ENSATEG00000001094-9982.550Anabas_testudineus
ENSKMAG00000011931smarca4a10093.247ENSATEG00000011524smarca4a10093.063Anabas_testudineus
ENSKMAG00000011931smarca4a9987.205ENSANAG00000036991SMARCA410083.121Aotus_nancymaae
ENSKMAG00000011931smarca4a9585.507ENSACLG00000008638-9885.197Astatotilapia_calliptera
ENSKMAG00000011931smarca4a9894.820ENSACLG00000000163smarca4a9994.852Astatotilapia_calliptera
ENSKMAG00000011931smarca4a9786.962ENSAMXG00000021023smarca4a9886.744Astyanax_mexicanus
ENSKMAG00000011931smarca4a9487.057ENSAMXG00000011238-9685.526Astyanax_mexicanus
ENSKMAG00000011931smarca4a10086.986ENSBTAG00000019220SMARCA49886.973Bos_taurus
ENSKMAG00000011931smarca4a10082.540ENSCJAG00000005936SMARCA410082.363Callithrix_jacchus
ENSKMAG00000011931smarca4a10086.369ENSCAFG00000017584SMARCA410086.064Canis_familiaris
ENSKMAG00000011931smarca4a10086.369ENSCAFG00020024620SMARCA49986.064Canis_lupus_dingo
ENSKMAG00000011931smarca4a10082.763ENSCHIG00000015318SMARCA49882.904Capra_hircus
ENSKMAG00000011931smarca4a10086.978ENSTSYG00000012966SMARCA410086.548Carlito_syrichta
ENSKMAG00000011931smarca4a9481.842ENSCAPG00000015932SMARCA49489.697Cavia_aperea
ENSKMAG00000011931smarca4a9987.562ENSCPOG00000015549SMARCA410085.819Cavia_porcellus
ENSKMAG00000011931smarca4a10083.090ENSCCAG00000031660SMARCA49982.979Cebus_capucinus
ENSKMAG00000011931smarca4a10086.491ENSCATG00000029530SMARCA410086.186Cercocebus_atys
ENSKMAG00000011931smarca4a10086.970ENSCLAG00000011946SMARCA410086.609Chinchilla_lanigera
ENSKMAG00000011931smarca4a10086.569ENSCPBG00000009994SMARCA410086.011Chrysemys_picta_bellii
ENSKMAG00000011931smarca4a10086.430ENSCANG00000036013SMARCA410086.125Colobus_angolensis_palliatus
ENSKMAG00000011931smarca4a10086.369ENSCGRG00001016732Smarca410086.064Cricetulus_griseus_chok1gshd
ENSKMAG00000011931smarca4a10086.369ENSCGRG00000017242Smarca410086.064Cricetulus_griseus_crigri
ENSKMAG00000011931smarca4a9693.007ENSCSEG00000014771smarca4a10092.581Cynoglossus_semilaevis
ENSKMAG00000011931smarca4a9884.984ENSCVAG00000003018-9884.552Cyprinodon_variegatus
ENSKMAG00000011931smarca4a9995.000ENSCVAG00000006979smarca4a9995.000Cyprinodon_variegatus
ENSKMAG00000011931smarca4a10089.188ENSDARG00000077226smarca4a10088.379Danio_rerio
ENSKMAG00000011931smarca4a9284.775ENSDARG00000104339SMARCA49484.512Danio_rerio
ENSKMAG00000011931smarca4a10078.736ENSDNOG00000048847SMARCA49091.441Dasypus_novemcinctus
ENSKMAG00000011931smarca4a8481.898ENSDORG00000002544Smarca49280.189Dipodomys_ordii
ENSKMAG00000011931smarca4a9377.432ENSETEG00000013361SMARCA49475.940Echinops_telfairi
ENSKMAG00000011931smarca4a10086.491ENSEASG00005006167SMARCA410084.560Equus_asinus_asinus
ENSKMAG00000011931smarca4a10086.553ENSECAG00000008334SMARCA410086.064Equus_caballus
ENSKMAG00000011931smarca4a10089.138ENSELUG00000010247smarca4a10087.971Esox_lucius
ENSKMAG00000011931smarca4a9979.634ENSELUG00000023232-9778.296Esox_lucius
ENSKMAG00000011931smarca4a10086.333ENSFCAG00000004894SMARCA410086.028Felis_catus
ENSKMAG00000011931smarca4a7591.429ENSFALG00000004208SMARCA49285.499Ficedula_albicollis
ENSKMAG00000011931smarca4a9286.267ENSFDAG00000012237SMARCA49786.959Fukomys_damarensis
ENSKMAG00000011931smarca4a10084.510ENSFHEG00000007902-9884.470Fundulus_heteroclitus
ENSKMAG00000011931smarca4a9693.857ENSFHEG00000010182smarca4a10093.464Fundulus_heteroclitus
ENSKMAG00000011931smarca4a8991.525ENSGMOG00000002649smarca4a9488.988Gadus_morhua
ENSKMAG00000011931smarca4a9080.739ENSGMOG00000005756-9079.657Gadus_morhua
ENSKMAG00000011931smarca4a7387.193ENSGALG00000047145SMARCA410086.090Gallus_gallus
ENSKMAG00000011931smarca4a9883.099ENSGAFG00000008827-9882.952Gambusia_affinis
ENSKMAG00000011931smarca4a9094.380ENSGAFG00000014900smarca4a10093.338Gambusia_affinis
ENSKMAG00000011931smarca4a9980.060ENSGACG00000016033-10078.759Gasterosteus_aculeatus
ENSKMAG00000011931smarca4a9892.158ENSGACG00000006691smarca4a10092.157Gasterosteus_aculeatus
ENSKMAG00000011931smarca4a10086.789ENSGAGG00000016757SMARCA49987.233Gopherus_agassizii
ENSKMAG00000011931smarca4a10086.491ENSGGOG00000009882SMARCA410086.186Gorilla_gorilla
ENSKMAG00000011931smarca4a10084.726ENSHBUG00000005447-9885.329Haplochromis_burtoni
ENSKMAG00000011931smarca4a10094.547ENSHBUG00000021172smarca4a10094.424Haplochromis_burtoni
ENSKMAG00000011931smarca4a10085.819ENSHGLG00000010519SMARCA410085.453Heterocephalus_glaber_female
ENSKMAG00000011931smarca4a10085.592ENSHGLG00100013774SMARCA410084.991Heterocephalus_glaber_male
ENSKMAG00000011931smarca4a9592.700ENSHCOG00000009510smarca4a9692.839Hippocampus_comes
ENSKMAG00000011931smarca4a9884.085ENSIPUG00000016346-9784.288Ictalurus_punctatus
ENSKMAG00000011931smarca4a10088.936ENSIPUG00000006107smarca4a10088.678Ictalurus_punctatus
ENSKMAG00000011931smarca4a10086.308ENSSTOG00000007939SMARCA410085.941Ictidomys_tridecemlineatus
ENSKMAG00000011931smarca4a10084.482ENSJJAG00000012877Smarca410083.763Jaculus_jaculus
ENSKMAG00000011931smarca4a9874.093ENSLBEG00000020655-9881.776Labrus_bergylta
ENSKMAG00000011931smarca4a9590.576ENSLBEG00000017383smarca4a9789.511Labrus_bergylta
ENSKMAG00000011931smarca4a5280.896ENSLACG00000015309SMARCA410081.620Latimeria_chalumnae
ENSKMAG00000011931smarca4a10086.249ENSLOCG00000007820smarca4a9985.831Lepisosteus_oculatus
ENSKMAG00000011931smarca4a10086.394ENSLAFG00000001433SMARCA410086.089Loxodonta_africana
ENSKMAG00000011931smarca4a10086.491ENSMFAG00000032146SMARCA49986.186Macaca_fascicularis
ENSKMAG00000011931smarca4a10086.491ENSMMUG00000012042SMARCA49592.364Macaca_mulatta
ENSKMAG00000011931smarca4a10086.536ENSMNEG00000028512SMARCA410086.230Macaca_nemestrina
ENSKMAG00000011931smarca4a10086.614ENSMLEG00000034976SMARCA410086.150Mandrillus_leucophaeus
ENSKMAG00000011931smarca4a10094.114ENSMAMG00000009256smarca4a10094.237Mastacembelus_armatus
ENSKMAG00000011931smarca4a9587.937ENSMAMG00000002841-9887.368Mastacembelus_armatus
ENSKMAG00000011931smarca4a10094.427ENSMZEG00005003889smarca4a10094.305Maylandia_zebra
ENSKMAG00000011931smarca4a9487.617ENSMZEG00005023861-9883.787Maylandia_zebra
ENSKMAG00000011931smarca4a10086.211ENSMAUG00000020731Smarca410085.662Mesocricetus_auratus
ENSKMAG00000011931smarca4a10086.272ENSMICG00000009806SMARCA410085.967Microcebus_murinus
ENSKMAG00000011931smarca4a10085.967ENSMOCG00000022209Smarca410085.662Microtus_ochrogaster
ENSKMAG00000011931smarca4a9983.165ENSMMOG00000008466-9882.983Mola_mola
ENSKMAG00000011931smarca4a9591.349ENSMMOG00000007571smarca4a9890.845Mola_mola
ENSKMAG00000011931smarca4a10085.132ENSMODG00000006287SMARCA410084.274Monodelphis_domestica
ENSKMAG00000011931smarca4a8984.070ENSMALG00000021534-9684.773Monopterus_albus
ENSKMAG00000011931smarca4a9692.917ENSMALG00000003388smarca4a10092.407Monopterus_albus
ENSKMAG00000011931smarca4a10086.177MGP_CAROLIEiJ_G0031879Smarca410085.872Mus_caroli
ENSKMAG00000011931smarca4a10086.177ENSMUSG00000032187Smarca410085.872Mus_musculus
ENSKMAG00000011931smarca4a10086.116MGP_PahariEiJ_G0014745Smarca410086.311Mus_pahari
ENSKMAG00000011931smarca4a10086.177MGP_SPRETEiJ_G0033003Smarca410085.872Mus_spretus
ENSKMAG00000011931smarca4a10086.430ENSMPUG00000005711SMARCA410086.125Mustela_putorius_furo
ENSKMAG00000011931smarca4a10086.430ENSMLUG00000004491-10086.125Myotis_lucifugus
ENSKMAG00000011931smarca4a10086.091ENSNGAG00000021852Smarca410085.907Nannospalax_galili
ENSKMAG00000011931smarca4a9591.213ENSNBRG00000011457smarca4a9690.772Neolamprologus_brichardi
ENSKMAG00000011931smarca4a8985.564ENSNBRG00000018865-9985.004Neolamprologus_brichardi
ENSKMAG00000011931smarca4a10081.162ENSNLEG00000012389SMARCA49484.289Nomascus_leucogenys
ENSKMAG00000011931smarca4a8093.103ENSOPRG00000000885-7693.103Ochotona_princeps
ENSKMAG00000011931smarca4a10084.874ENSODEG00000017127SMARCA410084.201Octodon_degus
ENSKMAG00000011931smarca4a10094.424ENSONIG00000008196smarca4a10094.363Oreochromis_niloticus
ENSKMAG00000011931smarca4a10084.787ENSONIG00000018040-9983.455Oreochromis_niloticus
ENSKMAG00000011931smarca4a9981.223ENSOCUG00000001787SMARCA49881.678Oryctolagus_cuniculus
ENSKMAG00000011931smarca4a9693.542ENSORLG00000015452smarca4a10093.403Oryzias_latipes
ENSKMAG00000011931smarca4a9584.204ENSORLG00000003955-9583.101Oryzias_latipes
ENSKMAG00000011931smarca4a9693.223ENSORLG00020004611smarca4a10093.403Oryzias_latipes_hni
ENSKMAG00000011931smarca4a9584.151ENSORLG00020009728-9682.814Oryzias_latipes_hni
ENSKMAG00000011931smarca4a9983.840ENSORLG00015007739-9682.804Oryzias_latipes_hsok
ENSKMAG00000011931smarca4a9693.223ENSORLG00015016560smarca4a10093.403Oryzias_latipes_hsok
ENSKMAG00000011931smarca4a9783.923ENSOMEG00000016626-9682.877Oryzias_melastigma
ENSKMAG00000011931smarca4a10093.769ENSOMEG00000007486smarca4a10093.708Oryzias_melastigma
ENSKMAG00000011931smarca4a8985.675ENSOGAG00000016148SMARCA410085.339Otolemur_garnettii
ENSKMAG00000011931smarca4a10086.442ENSOARG00000017454SMARCA49886.595Ovis_aries
ENSKMAG00000011931smarca4a10086.491ENSPPAG00000043191SMARCA410086.186Pan_paniscus
ENSKMAG00000011931smarca4a10086.333ENSPPRG00000000064SMARCA410086.028Panthera_pardus
ENSKMAG00000011931smarca4a8086.284ENSPTIG00000017447SMARCA410081.036Panthera_tigris_altaica
ENSKMAG00000011931smarca4a10086.491ENSPTRG00000010488SMARCA410086.186Pan_troglodytes
ENSKMAG00000011931smarca4a10086.597ENSPANG00000011042SMARCA49986.291Papio_anubis
ENSKMAG00000011931smarca4a10088.659ENSPKIG00000007770SMARCA410089.229Paramormyrops_kingsleyae
ENSKMAG00000011931smarca4a10086.109ENSPKIG00000010087-9786.773Paramormyrops_kingsleyae
ENSKMAG00000011931smarca4a10081.960ENSPSIG00000005547SMARCA410081.698Pelodiscus_sinensis
ENSKMAG00000011931smarca4a10086.028ENSPEMG00000020389Smarca410085.723Peromyscus_maniculatus_bairdii
ENSKMAG00000011931smarca4a10086.858ENSPCIG00000017138SMARCA410086.536Phascolarctos_cinereus
ENSKMAG00000011931smarca4a8888.235ENSPFOG00000012930-9982.909Poecilia_formosa
ENSKMAG00000011931smarca4a10092.975ENSPFOG00000007892smarca4a10093.219Poecilia_formosa
ENSKMAG00000011931smarca4a8390.634ENSPLAG00000018616-9886.553Poecilia_latipinna
ENSKMAG00000011931smarca4a10092.975ENSPLAG00000014294smarca4a10093.586Poecilia_latipinna
ENSKMAG00000011931smarca4a9693.042ENSPMEG00000003725smarca4a9893.042Poecilia_mexicana
ENSKMAG00000011931smarca4a9983.054ENSPMEG00000008929-9885.660Poecilia_mexicana
ENSKMAG00000011931smarca4a9882.068ENSPREG00000014823-9882.409Poecilia_reticulata
ENSKMAG00000011931smarca4a9991.651ENSPREG00000014608smarca4a10093.118Poecilia_reticulata
ENSKMAG00000011931smarca4a10084.358ENSPPYG00000009568SMARCA410084.002Pongo_abelii
ENSKMAG00000011931smarca4a7986.755ENSPCAG00000014054SMARCA47592.188Procavia_capensis
ENSKMAG00000011931smarca4a10086.369ENSPCOG00000023011SMARCA410085.906Propithecus_coquereli
ENSKMAG00000011931smarca4a9482.298ENSPVAG00000007787SMARCA49678.221Pteropus_vampyrus
ENSKMAG00000011931smarca4a9586.406ENSPNYG00000023995-9885.970Pundamilia_nyererei
ENSKMAG00000011931smarca4a9891.962ENSPNYG00000000717smarca4a9694.459Pundamilia_nyererei
ENSKMAG00000011931smarca4a9586.965ENSPNAG00000006636-9386.837Pygocentrus_nattereri
ENSKMAG00000011931smarca4a9784.817ENSPNAG00000024136smarca4a9786.410Pygocentrus_nattereri
ENSKMAG00000011931smarca4a10086.177ENSRNOG00000009271Smarca410085.872Rattus_norvegicus
ENSKMAG00000011931smarca4a10086.430ENSRBIG00000038696SMARCA49986.125Rhinopithecus_bieti
ENSKMAG00000011931smarca4a10086.430ENSRROG00000045509SMARCA410086.125Rhinopithecus_roxellana
ENSKMAG00000011931smarca4a9987.430ENSSBOG00000026896SMARCA49787.603Saimiri_boliviensis_boliviensis
ENSKMAG00000011931smarca4a10086.736ENSSHAG00000001642SMARCA410086.414Sarcophilus_harrisii
ENSKMAG00000011931smarca4a9685.055ENSSFOG00015009921-9490.692Scleropages_formosus
ENSKMAG00000011931smarca4a10089.853ENSSFOG00015013823smarca410089.548Scleropages_formosus
ENSKMAG00000011931smarca4a9994.332ENSSMAG00000003200smarca4a10092.822Scophthalmus_maximus
ENSKMAG00000011931smarca4a10081.568ENSSMAG00000014082-9980.594Scophthalmus_maximus
ENSKMAG00000011931smarca4a10089.209ENSSDUG00000017298smarca4a9990.290Seriola_dumerili
ENSKMAG00000011931smarca4a9985.954ENSSDUG00000005388-9883.009Seriola_dumerili
ENSKMAG00000011931smarca4a9587.525ENSSLDG00000023663-9787.549Seriola_lalandi_dorsalis
ENSKMAG00000011931smarca4a10093.978ENSSLDG00000024486smarca4a10093.674Seriola_lalandi_dorsalis
ENSKMAG00000011931smarca4a6396.273ENSSARG00000013477SMARCA48296.273Sorex_araneus
ENSKMAG00000011931smarca4a9584.935ENSSPUG00000004558SMARCA49883.658Sphenodon_punctatus
ENSKMAG00000011931smarca4a10093.613ENSSPAG00000004248smarca4a10093.248Stegastes_partitus
ENSKMAG00000011931smarca4a10083.155ENSSPAG00000012533-9982.441Stegastes_partitus
ENSKMAG00000011931smarca4a10086.577ENSSSCG00000013629SMARCA410086.089Sus_scrofa
ENSKMAG00000011931smarca4a5384.579ENSTGUG00000015488-9884.211Taeniopygia_guttata
ENSKMAG00000011931smarca4a8985.851ENSTRUG00000004885smarca4a10085.587Takifugu_rubripes
ENSKMAG00000011931smarca4a9583.365ENSTRUG00000001378SMARCA49883.111Takifugu_rubripes
ENSKMAG00000011931smarca4a7391.103ENSTNIG00000004859-10091.103Tetraodon_nigroviridis
ENSKMAG00000011931smarca4a10082.834ENSTNIG00000004536SMARCA410083.109Tetraodon_nigroviridis
ENSKMAG00000011931smarca4a10083.743ENSTTRG00000009519SMARCA410082.723Tursiops_truncatus
ENSKMAG00000011931smarca4a10086.430ENSUAMG00000014661SMARCA410086.125Ursus_americanus
ENSKMAG00000011931smarca4a9880.769ENSUMAG00000022005SMARCA49890.978Ursus_maritimus
ENSKMAG00000011931smarca4a10086.369ENSVVUG00000017820SMARCA49786.247Vulpes_vulpes
ENSKMAG00000011931smarca4a10082.512ENSXETG00000009355smarca49983.597Xenopus_tropicalis
ENSKMAG00000011931smarca4a9884.234ENSXCOG00000013494-9884.777Xiphophorus_couchianus
ENSKMAG00000011931smarca4a9885.077ENSXMAG00000007030-9885.041Xiphophorus_maculatus
ENSKMAG00000011931smarca4a10094.611ENSXMAG00000006321smarca4a10094.611Xiphophorus_maculatus

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