EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000011934 (Gene tree)
Gene ID: -
Gene Symbol: srsf6a
Alias: fa12h12|sfrs6a|wu:fa12h12|wu:fa13e06|zgc:63770
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 4856 bases
Position: chrLWHD01000042.1:310815-315670
Accession: 108236852
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000015986	RRM_1	PF00076.22	3.4e-32	1	2
ENSKMAP00000015986	RRM_1	PF00076.22	3.4e-32	2	2
ENSKMAP00000015974	RRM_1	PF00076.22	3.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000016204	-	2059	-	ENSKMAP00000015974	240 (aa)	-	-
ENSKMAT00000016216	-	867	XM_017417874	ENSKMAP00000015986	288 (aa)	XP_017273363	-

Gene Model

Click here to download ENSKMAG00000011934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000011934's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000011934	srsf6a	57	57.065	ENSKMAG00000014937	srsf5a	57	58.152
ENSKMAG00000011934	srsf6a	59	80.000	ENSKMAG00000013631	srsf4	97	62.857
ENSKMAG00000011934	srsf6a	57	62.360	ENSKMAG00000020486	srsf5b	83	57.258
ENSKMAG00000011934	srsf6a	58	39.779	ENSKMAG00000007113	srsf9	72	41.989
ENSKMAG00000011934	srsf6a	53	46.012	ENSKMAG00000019232	srsf1a	65	46.626

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000011934	srsf6a	59	85.870	ENSG00000124193	SRSF6	54	93.151	Homo_sapiens
ENSKMAG00000011934	srsf6a	100	83.750	ENSAPOG00000000810	srsf6a	60	95.588	Acanthochromis_polyacanthus
ENSKMAG00000011934	srsf6a	59	67.568	ENSAMEG00000003710	SRSF6	87	54.817	Ailuropoda_melanoleuca
ENSKMAG00000011934	srsf6a	91	81.100	ENSACIG00000023658	-	95	82.237	Amphilophus_citrinellus
ENSKMAG00000011934	srsf6a	71	77.027	ENSACIG00000020091	-	95	77.165	Amphilophus_citrinellus
ENSKMAG00000011934	srsf6a	59	84.916	ENSAOCG00000004309	-	88	65.248	Amphiprion_ocellaris
ENSKMAG00000011934	srsf6a	90	88.018	ENSAOCG00000019410	-	91	87.273	Amphiprion_ocellaris
ENSKMAG00000011934	srsf6a	91	82.063	ENSAPEG00000013086	-	94	74.847	Amphiprion_percula
ENSKMAG00000011934	srsf6a	60	80.319	ENSAPEG00000020746	-	99	65.157	Amphiprion_percula
ENSKMAG00000011934	srsf6a	58	82.584	ENSATEG00000007255	-	88	62.547	Anabas_testudineus
ENSKMAG00000011934	srsf6a	52	60.766	ENSATEG00000010679	-	79	72.300	Anabas_testudineus
ENSKMAG00000011934	srsf6a	59	85.870	ENSANAG00000024080	SRSF6	54	93.151	Aotus_nancymaae
ENSKMAG00000011934	srsf6a	59	80.645	ENSAMXG00000042692	-	96	76.296	Astyanax_mexicanus
ENSKMAG00000011934	srsf6a	59	85.870	ENSBTAG00000008527	SRSF6	87	66.777	Bos_taurus
ENSKMAG00000011934	srsf6a	59	85.870	ENSCJAG00000048403	SRSF6	96	67.509	Callithrix_jacchus
ENSKMAG00000011934	srsf6a	59	85.870	ENSCAFG00000009289	SRSF6	87	66.000	Canis_familiaris
ENSKMAG00000011934	srsf6a	59	85.870	ENSCAFG00020013559	SRSF6	87	66.000	Canis_lupus_dingo
ENSKMAG00000011934	srsf6a	59	85.870	ENSCHIG00000015890	-	87	66.777	Capra_hircus
ENSKMAG00000011934	srsf6a	59	84.783	ENSCHIG00000009148	-	87	66.113	Capra_hircus
ENSKMAG00000011934	srsf6a	59	69.412	ENSTSYG00000026476	SRSF6	85	54.355	Carlito_syrichta
ENSKMAG00000011934	srsf6a	59	80.435	ENSCPOG00000011761	SRSF6	87	62.021	Cavia_porcellus
ENSKMAG00000011934	srsf6a	59	85.870	ENSCCAG00000026018	-	54	93.151	Cebus_capucinus
ENSKMAG00000011934	srsf6a	59	75.135	ENSCCAG00000018540	-	96	56.993	Cebus_capucinus
ENSKMAG00000011934	srsf6a	59	85.870	ENSCATG00000030794	SRSF6	54	93.151	Cercocebus_atys
ENSKMAG00000011934	srsf6a	59	85.870	ENSCLAG00000010247	SRSF6	54	93.151	Chinchilla_lanigera
ENSKMAG00000011934	srsf6a	59	85.870	ENSCGRG00001022339	Srsf6	54	93.151	Cricetulus_griseus_chok1gshd
ENSKMAG00000011934	srsf6a	90	77.169	ENSCSEG00000019782	SRSF6	88	77.193	Cynoglossus_semilaevis
ENSKMAG00000011934	srsf6a	61	82.474	ENSDARG00000016783	srsf6b	77	94.521	Danio_rerio
ENSKMAG00000011934	srsf6a	59	85.870	ENSDORG00000028378	Srsf6	54	93.151	Dipodomys_ordii
ENSKMAG00000011934	srsf6a	59	84.153	ENSETEG00000006221	SRSF6	87	66.000	Echinops_telfairi
ENSKMAG00000011934	srsf6a	59	85.870	ENSEASG00005023429	SRSF6	76	66.904	Equus_asinus_asinus
ENSKMAG00000011934	srsf6a	59	85.870	ENSECAG00000023932	SRSF6	81	66.904	Equus_caballus
ENSKMAG00000011934	srsf6a	100	76.797	ENSELUG00000013506	SRSF6	100	76.471	Esox_lucius
ENSKMAG00000011934	srsf6a	59	83.871	ENSELUG00000024182	SRSF6	90	76.423	Esox_lucius
ENSKMAG00000011934	srsf6a	59	85.870	ENSFCAG00000032814	SRSF6	87	66.000	Felis_catus
ENSKMAG00000011934	srsf6a	92	77.955	ENSFHEG00000023065	srsf6a	88	79.310	Fundulus_heteroclitus
ENSKMAG00000011934	srsf6a	77	81.667	ENSGMOG00000014458	srsf6a	51	77.368	Gadus_morhua
ENSKMAG00000011934	srsf6a	70	68.780	ENSGMOG00000006105	srsf6a	96	60.870	Gadus_morhua
ENSKMAG00000011934	srsf6a	59	84.492	ENSGALG00000000990	SRSF6	54	93.151	Gallus_gallus
ENSKMAG00000011934	srsf6a	100	68.313	ENSGACG00000006084	srsf6a	100	76.623	Gasterosteus_aculeatus
ENSKMAG00000011934	srsf6a	59	85.870	ENSGGOG00000009808	SRSF6	54	93.151	Gorilla_gorilla
ENSKMAG00000011934	srsf6a	100	66.462	ENSHBUG00000006386	-	86	58.333	Haplochromis_burtoni
ENSKMAG00000011934	srsf6a	59	85.870	ENSHGLG00000007348	SRSF6	54	93.151	Heterocephalus_glaber_female
ENSKMAG00000011934	srsf6a	62	71.271	ENSHGLG00000007701	-	98	55.960	Heterocephalus_glaber_female
ENSKMAG00000011934	srsf6a	90	73.519	ENSHCOG00000002740	srsf6a	94	73.559	Hippocampus_comes
ENSKMAG00000011934	srsf6a	91	72.527	ENSIPUG00000004776	-	90	74.725	Ictalurus_punctatus
ENSKMAG00000011934	srsf6a	56	85.294	ENSIPUG00000016856	SRSF6	88	63.880	Ictalurus_punctatus
ENSKMAG00000011934	srsf6a	59	85.870	ENSSTOG00000010866	SRSF6	54	93.151	Ictidomys_tridecemlineatus
ENSKMAG00000011934	srsf6a	58	86.413	ENSLBEG00000007356	srsf6a	95	66.276	Labrus_bergylta
ENSKMAG00000011934	srsf6a	89	68.439	ENSLACG00000005466	SRSF6	88	66.333	Latimeria_chalumnae
ENSKMAG00000011934	srsf6a	58	80.114	ENSLACG00000009389	-	63	57.468	Latimeria_chalumnae
ENSKMAG00000011934	srsf6a	59	85.870	ENSMFAG00000036925	SRSF6	54	93.151	Macaca_fascicularis
ENSKMAG00000011934	srsf6a	59	85.870	ENSMMUG00000006742	SRSF6	54	93.151	Macaca_mulatta
ENSKMAG00000011934	srsf6a	59	84.783	ENSMNEG00000027392	-	54	90.411	Macaca_nemestrina
ENSKMAG00000011934	srsf6a	59	84.783	ENSMNEG00000038270	-	87	66.221	Macaca_nemestrina
ENSKMAG00000011934	srsf6a	59	89.189	ENSMAMG00000017161	srsf6a	94	77.064	Mastacembelus_armatus
ENSKMAG00000011934	srsf6a	78	85.532	ENSMZEG00005020658	-	96	77.174	Maylandia_zebra
ENSKMAG00000011934	srsf6a	100	60.802	ENSMZEG00005008032	-	100	59.639	Maylandia_zebra
ENSKMAG00000011934	srsf6a	59	85.326	ENSMICG00000008537	SRSF6	96	59.940	Microcebus_murinus
ENSKMAG00000011934	srsf6a	80	88.889	ENSMALG00000003702	srsf6a	58	89.091	Monopterus_albus
ENSKMAG00000011934	srsf6a	59	85.870	MGP_CAROLIEiJ_G0024606	Srsf6	54	93.151	Mus_caroli
ENSKMAG00000011934	srsf6a	59	85.870	ENSMUSG00000016921	Srsf6	54	93.151	Mus_musculus
ENSKMAG00000011934	srsf6a	59	85.870	MGP_PahariEiJ_G0026050	Srsf6	54	93.151	Mus_pahari
ENSKMAG00000011934	srsf6a	59	85.870	MGP_SPRETEiJ_G0025528	Srsf6	54	93.151	Mus_spretus
ENSKMAG00000011934	srsf6a	62	67.500	ENSMPUG00000017692	SRSF6	91	67.143	Mustela_putorius_furo
ENSKMAG00000011934	srsf6a	59	62.437	ENSMLUG00000016618	SRSF6	87	52.866	Myotis_lucifugus
ENSKMAG00000011934	srsf6a	59	85.870	ENSNGAG00000017560	Srsf6	54	93.151	Nannospalax_galili
ENSKMAG00000011934	srsf6a	100	76.415	ENSNBRG00000001846	-	91	68.923	Neolamprologus_brichardi
ENSKMAG00000011934	srsf6a	59	85.870	ENSNLEG00000006524	SRSF6	54	93.151	Nomascus_leucogenys
ENSKMAG00000011934	srsf6a	59	84.865	ENSMEUG00000014615	SRSF6	98	66.443	Notamacropus_eugenii
ENSKMAG00000011934	srsf6a	92	75.159	ENSONIG00000001925	-	88	77.460	Oreochromis_niloticus
ENSKMAG00000011934	srsf6a	59	83.889	ENSONIG00000020247	-	53	83.889	Oreochromis_niloticus
ENSKMAG00000011934	srsf6a	61	56.466	ENSOCUG00000009785	-	89	54.895	Oryctolagus_cuniculus
ENSKMAG00000011934	srsf6a	58	54.491	ENSOCUG00000023999	-	70	55.422	Oryctolagus_cuniculus
ENSKMAG00000011934	srsf6a	100	74.667	ENSORLG00000003530	srsf6a	53	98.148	Oryzias_latipes
ENSKMAG00000011934	srsf6a	100	74.667	ENSORLG00015009410	srsf6a	53	98.148	Oryzias_latipes_hsok
ENSKMAG00000011934	srsf6a	59	81.765	ENSOMEG00000006001	srsf6a	93	76.364	Oryzias_melastigma
ENSKMAG00000011934	srsf6a	59	83.060	ENSOARG00000003117	SRSF6	87	65.000	Ovis_aries
ENSKMAG00000011934	srsf6a	59	75.706	ENSPPAG00000043131	-	83	59.259	Pan_paniscus
ENSKMAG00000011934	srsf6a	59	85.870	ENSPPRG00000008917	SRSF6	87	66.000	Panthera_pardus
ENSKMAG00000011934	srsf6a	59	81.356	ENSPTIG00000021305	-	57	63.869	Panthera_tigris_altaica
ENSKMAG00000011934	srsf6a	59	85.870	ENSPTRG00000044686	-	54	93.151	Pan_troglodytes
ENSKMAG00000011934	srsf6a	59	75.706	ENSPTRG00000046274	-	83	59.259	Pan_troglodytes
ENSKMAG00000011934	srsf6a	59	85.870	ENSPANG00000035224	SRSF6	54	93.151	Papio_anubis
ENSKMAG00000011934	srsf6a	91	81.928	ENSPKIG00000018463	-	100	66.563	Paramormyrops_kingsleyae
ENSKMAG00000011934	srsf6a	78	42.781	ENSPKIG00000015703	-	95	62.143	Paramormyrops_kingsleyae
ENSKMAG00000011934	srsf6a	92	74.026	ENSPMGG00000014963	srsf6a	53	56.842	Periophthalmus_magnuspinnatus
ENSKMAG00000011934	srsf6a	59	84.865	ENSPCIG00000003820	SRSF6	54	93.151	Phascolarctos_cinereus
ENSKMAG00000011934	srsf6a	59	81.921	ENSPCIG00000022430	-	53	64.794	Phascolarctos_cinereus
ENSKMAG00000011934	srsf6a	91	90.179	ENSPFOG00000006437	srsf6a	92	81.967	Poecilia_formosa
ENSKMAG00000011934	srsf6a	91	89.732	ENSPLAG00000009243	srsf6a	92	81.967	Poecilia_latipinna
ENSKMAG00000011934	srsf6a	59	85.870	ENSPMEG00000006042	SRSF6	94	73.913	Poecilia_mexicana
ENSKMAG00000011934	srsf6a	52	74.176	ENSPMEG00000006056	SRSF6	89	75.824	Poecilia_mexicana
ENSKMAG00000011934	srsf6a	59	84.239	ENSPCAG00000010954	SRSF6	91	62.583	Procavia_capensis
ENSKMAG00000011934	srsf6a	59	85.326	ENSPCOG00000026364	SRSF6	96	59.639	Propithecus_coquereli
ENSKMAG00000011934	srsf6a	59	85.326	ENSPVAG00000015232	SRSF6	87	67.224	Pteropus_vampyrus
ENSKMAG00000011934	srsf6a	100	66.975	ENSPNYG00000004944	-	98	67.101	Pundamilia_nyererei
ENSKMAG00000011934	srsf6a	97	83.824	ENSPNYG00000011272	-	90	73.089	Pundamilia_nyererei
ENSKMAG00000011934	srsf6a	59	88.268	ENSRBIG00000041414	SRSF6	56	93.151	Rhinopithecus_bieti
ENSKMAG00000011934	srsf6a	59	85.870	ENSRROG00000029989	SRSF6	54	93.151	Rhinopithecus_roxellana
ENSKMAG00000011934	srsf6a	58	74.118	ENSSBOG00000034078	-	88	58.273	Saimiri_boliviensis_boliviensis
ENSKMAG00000011934	srsf6a	59	85.870	ENSSBOG00000033708	-	54	93.151	Saimiri_boliviensis_boliviensis
ENSKMAG00000011934	srsf6a	100	74.107	ENSSFOG00015019681	-	100	74.684	Scleropages_formosus
ENSKMAG00000011934	srsf6a	58	90.000	ENSSFOG00015015169	SRSF6	93	78.947	Scleropages_formosus
ENSKMAG00000011934	srsf6a	99	58.882	ENSSMAG00000017447	-	83	62.278	Scophthalmus_maximus
ENSKMAG00000011934	srsf6a	91	63.303	ENSSMAG00000014819	-	83	73.077	Scophthalmus_maximus
ENSKMAG00000011934	srsf6a	59	89.189	ENSSDUG00000016097	srsf6a	94	69.419	Seriola_dumerili
ENSKMAG00000011934	srsf6a	91	76.606	ENSSLDG00000022841	srsf6a	94	74.434	Seriola_lalandi_dorsalis
ENSKMAG00000011934	srsf6a	59	87.845	ENSSPUG00000004967	SRSF6	89	68.092	Sphenodon_punctatus
ENSKMAG00000011934	srsf6a	92	76.056	ENSSPAG00000002362	srsf6a	94	92.727	Stegastes_partitus
ENSKMAG00000011934	srsf6a	59	85.870	ENSSSCG00000007362	SRSF6	87	67.143	Sus_scrofa
ENSKMAG00000011934	srsf6a	59	85.870	ENSTGUG00000003455	SRSF6	89	64.309	Taeniopygia_guttata
ENSKMAG00000011934	srsf6a	91	74.351	ENSTNIG00000001692	srsf6a	95	69.355	Tetraodon_nigroviridis
ENSKMAG00000011934	srsf6a	59	85.870	ENSUAMG00000003559	SRSF6	87	66.000	Ursus_americanus
ENSKMAG00000011934	srsf6a	91	87.946	ENSXMAG00000021849	srsf6a	93	79.288	Xiphophorus_maculatus